Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Metschnikowia_20australis_20[genbank_20GCA_5F002073855.1_202017-03- 29] 154 sequences; 14,350,841 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq96 102 7e-17 seq91 98.7 9e-16 seq73 89.7 4e-13 >seq96 Length=44914 Score = 102 bits (112), Expect = 7e-17 Identities = 160/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569 |||| || | |||||| | |||||| || | ||| ||||| || || |||||||| ||| Sbjct 31 TACCACCTCTTAATCTGAGCACCAAATGCAATGTGGACTCCTTCTGGATGTTGTAGTCGG 90 Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629 || || | ||||| | || || || ||| |||| | | || || || || | Sbjct 91 ACAATGTTCTGCCGTCCTCCAATTGCTTACCGGCGAAGATCAATCTTTGTTGGTCTGGTG 150 Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689 | ||||||||||| ||| ||| || ||| || | || | |||||||| | ||||| Sbjct 151 GAATGCCCTCCTTATCTTGAATCTTGGCTTTGACATTATCAATGGTGTCCGAGGCCTCGA 210 Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 |||||| || | || || ||||| || ||||| || || || ||||| Sbjct 211 CCTCGAGTGTGATTGTCTTTCCGGTTAGTGTTTTGACGAAGATTTGCAT 259 >seq91 Length=77570 Score = 98.7 bits (108), Expect = 9e-16 Identities = 159/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569 |||| || | ||||| | |||||| || | ||| ||||| || || |||||||| ||| Sbjct 414 TACCACCCCTCAATCTGAGCACCAAATGCAATGTGGACTCCTTCTGGATGTTGTAGTCGG 355 Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629 || || | ||||| | || || || ||| |||| | | || || || || | Sbjct 354 ACAATGTTCTGCCGTCCTCCAATTGCTTACCGGCGAAGATCAATCTTTGTTGGTCTGGTG 295 Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689 | ||||||||||| ||| ||| || ||| || | || | |||||||| | ||||| Sbjct 294 GAATGCCCTCCTTATCTTGAATCTTGGCTTTGACATTATCAATGGTGTCCGAGGCCTCGA 235 Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 |||||| || | || || ||||||| || || ||||| || ||||| Sbjct 234 CCTCGAGTGTGATTGTCTTTCCGGTCAAGGTCTTGACAAAGATTTGCAT 186 Score = 82.4 bits (90), Expect = 7e-11 Identities = 149/218 (68%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 118521 AATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGC 118580 ||||| | |||||| || | ||| ||||| || || |||||||| || || || | Sbjct 631 AATCTGAGCACCAAATGCAATGTGGACTCCTTCTGGATGTTGTAGTCAGACAATGTTCTG 572 Query 118581 GTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCC 118640 ||||| | || || || ||| | || | | || || || || || ||||||||| Sbjct 571 CCGTCCTCCAATTGCTTACCGGCGAAAATCAATCTTTGTTGGTCTGGTGGAATGCCCTCC 512 Query 118641 TTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTC 118700 || ||| ||| || ||| || | || | |||||| | | ||||||||||| || Sbjct 511 TTATCTTGAATCTTGGCTTTGACATTATCAATGGTGTCAGAGGCCTCGACCTCGAGTGTG 452 Query 118701 ACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 | || || ||||||| || || ||||| || ||||| Sbjct 451 ATTGTCTTTCCGGTCAAGGTCTTGACAAAGATTTGCAT 414 >seq73 Length=169253 Score = 89.7 bits (98), Expect = 4e-13 Identities = 129/182 (71%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 133223 GTTGACCACTTGAAACTCGCCGGCGAGAACGCGTCTGAGATATACATTCGACGTGAACGG 133282 |||||| | ||||||||| || || || || | |||| || | ||| || ||| | || Sbjct 117509 GTTGACAATTTGAAACTCACCTGCAAGCACTCTTCTGGAGTAGATATTGGAGGTGTAGGG 117450 Query 133283 TTCGAAAGATTCGTTGTTGCCGAGTATCTGCGCCGTCGTCGCCGTGGGCATGTACGCCAC 133342 |||||| | |||||||| || | ||||||| ||| | || || ||||| ||||| Sbjct 117449 CTCGAAACACTCGTTGTTTCCCAAGATCTGCGACGTGGAAGCAGTTGGCATTGGTGCCAC 117390 Query 133343 CAACAAAGAGTTTCTTACGCCGTACTTGTTTATGTTGCACTGCAATTCGTTCCAGTCCCA 133402 | ||| |||||||| | |||| |||| | ||| || ||| || ||||||||| Sbjct 117389 GAGCAACGAGTTTCTGAGCCCGTGCTTGGCCAAGTTCTGCTTCAACGTGTCCCAGTCCCA 117330 Query 133403 CA 133404 || Sbjct 117329 CA 117328 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433829585754568