Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Metschnikowia_20australis_20[genbank_20GCA_5F002073855.1_202017-03- 29] 154 sequences; 14,350,841 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq96 98.7 1e-15 seq79 98.7 1e-15 seq91 95.1 1e-14 >seq96 Length=44914 Score = 98.7 bits (108), Expect = 1e-15 Identities = 162/231 (70%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 || |||||||| | | |||||||||||||||| |||||| || || ||||| || | | Sbjct 33 CCACCTCTTAATCTGAGCACCAAATGCAATGTGGACTCCTTCTGGATGTTGTAGTCGGAC 92 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 | || | |||| || | |||||||| ||||| || | || || ||||| | || Sbjct 93 AATGTTCTGCCGTCCTCCAATTGCTTACCGGCGAAGATCAATCTTTGTTGGTCTGGTGGA 152 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 43135 | || |||||| | | ||| | || | ||||| | | | ||||| | || || Sbjct 153 ATGCCCTCCTTAT-CTTGAATCTTGGCTTTGACATTATCAATGGTGTCCGAGGCCTCGAC 211 Query 43136 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATTTT 43186 |||| ||||| || || || ||||| || || || |||||||||||||| Sbjct 212 CTCGAGTGTGATTGTCTTTCCGGTTAGTGTTTTGACGAAGATTTGCATTTT 262 >seq79 Length=900310 Score = 98.7 bits (108), Expect = 1e-15 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 || ||||| || | | ||||||||||| ||| |||||| || || ||||| |||| | Sbjct 649555 CCACCTCTCAATCTGAGGACCAAATGCAACGTGGACTCCTTCTGGATGTTGTAGTCAGAC 649496 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 | || | |||| || | ||||||||||||||| || | || |||||||| | || Sbjct 649495 AAGGTTCTGCCGTCCTCCAACTGCTTACCAGCGAAGATCAATCTTTGCTGGTCAGGTGGA 649436 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 43136 | | |||||||| ||| || |||| | | | |||||| | || || Sbjct 649435 ATTCCTTCCTTGTCTTGGATCTTGGCCTTGACATTGTCGATGGTGTCGGAGGCCTCGACC 649376 Query 43137 TCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || | |||||||| || ||||||| ||||| || ||||||||||| Sbjct 649375 TCCAAAGTGATGGTCTTACCCGTTAAGGTCTTGACGAAGATTTGCAT 649329 >seq91 Length=77570 Score = 95.1 bits (104), Expect = 1e-14 Identities = 160/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 42956 TCCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 43015 ||| ||||| || | | |||||||||||||||| |||||| || || ||||| |||| Sbjct 641 TCCGCCTCTCAATCTGAGCACCAAATGCAATGTGGACTCCTTCTGGATGTTGTAGTCAGA 582 Query 43016 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGG 43075 || || | |||| || | |||||||| ||||| || | || || ||||| | || Sbjct 581 CAATGTTCTGCCGTCCTCCAATTGCTTACCGGCGAAAATCAATCTTTGTTGGTCTGGTGG 522 Query 43076 CACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCA 43134 | || |||||| | | ||| | || | ||||| | | | ||||| | || | Sbjct 521 AATGCCCTCCTTAT-CTTGAATCTTGGCTTTGACATTATCAATGGTGTCAGAGGCCTCGA 463 Query 43135 CATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 | |||| ||||| || || || || | ||||| |||||||||||||| Sbjct 462 CCTCGAGTGTGATTGTCTTTCCGGTCAAGGTCTTGACAAAGATTTGCAT 414 Score = 86.0 bits (94), Expect = 7e-12 Identities = 147/211 (70%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 42974 CACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATC 43033 |||||||||||||||| |||||| || || ||||| || | || || | |||| || Sbjct 395 CACCAAATGCAATGTGGACTCCTTCTGGATGTTGTAGTCGGACAATGTTCTGCCGTCCTC 336 Query 43034 TAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 43093 | |||||||| ||||| || | || || ||||| | || | || |||||| | | | Sbjct 335 CAATTGCTTACCGGCGAAGATCAATCTTTGTTGGTCTGGTGGAATGCCCTCCTTAT-CTT 277 Query 43094 GATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTT 43152 || | || | ||||| | | | ||||| | || || |||| ||||| || | Sbjct 276 GAATCTTGGCTTTGACATTATCAATGGTGTCCGAGGCCTCGACCTCGAGTGTGATTGTCT 217 Query 43153 TGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 | || || | ||||| |||||||||||||| Sbjct 216 TTCCGGTCAAGGTCTTGACAAAGATTTGCAT 186 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571816499251120