Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Metschnikowia_20australis_20[genbank_20GCA_5F002073855.1_202017-03- 29] 154 sequences; 14,350,841 total letters Query= NC_003027.1 Length=150773 Score E Sequences producing significant alignments: (Bits) Value seq68 127 2e-24 >seq68 Length=1116518 Score = 127 bits (140), Expect = 2e-24 Identities = 460/711 (65%), Gaps = 8/711 (1%) Strand=Plus/Minus Query 13928 ACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGATATATTTTCCATAAAATCAAAT 13987 ||||| || || |||||||| || ||||| ||| || || |||||||| || || ||| Sbjct 368533 ACTCTCTTCTCGAAGAAGTTGGTCTTACCAGCCAAAGAAATGTTTTCCATGAAGTCGAAT 368474 Query 13988 GGATTTGTTGACATAA-ACACTTTATCACAACCTAGTTCTAATAGTAATCTATCCGCAAT 14046 || || || |||| |||| || | |||| | | || ||||| || || | Sbjct 368473 GGGTTGGTA-ACATTGTACACCTTTTTGTTGCCTAAGGCAACGAGCAATCTGTCGGCGAC 368415 Query 14047 GAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTA-GTTTTACAGGAATTA 14105 ||||| | ||| || |||| || | | |||||||| | | | | | | || | Sbjct 368414 AAACTCCACATACTGGCACATCAAGTTGCTGTTCATACCCAACAAGCTAGATGGCAAGGA 368355 Query 14106 TATTGGTTAAAAATTCTTTTTCTATAGACACAGCCTCGTTTATAATAATCGTAATAATTT 14165 || || || | || || || || || ||||||||| | | ||| || | ||||| Sbjct 368354 -ATCCGTGAAGTACTCCTTCTCAATGGAAACAGCCTCGGTAACAATTCTCTCGACAATTT 368296 Query 14166 CATTAGAAGGAGGATATTTTAGATGTTTAAAAATTAAACACGCAAAATCACAATGAAGGC 14225 | | || | ||| | || || | ||||| ||||| ||| || | || Sbjct 368295 TTTGGGCGGGTCTGTTTTTCAAGTGCGAGAACAACAAACAAGCAAAGTCAGTGTGCAAGC 368236 Query 14226 CCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGttttt 14285 |||| || | | ||| | ||||||||||| || | || |||||||| |||| || | Sbjct 368235 CCTCGTCACGGCAAATCAACTCGTTTGAAAACGTGAGGCCAGGCATCAAGCCTCTCTTCT 368176 Query 14286 ttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCTCAACTGCAGCAAACG 14345 ||||||| || || | || ||||| || || || || | |||||||| ||||| || | Sbjct 368175 TTAACCAGAAGATCGAGGCAAATGAGCCTGAGAAAAAGACACCCTCAACGGCAGCGAAGG 368116 Query 14346 CTATTAATCGTTCTCCAAACGATGCTTTTTTGTTCGATATCCATTTTCTAGCCCATTCAG 14405 | | |||| || |||||| | || | || | ||||| | ||||| || | Sbjct 368115 CAACCAATCTCTCGCCAAACAAGGCCTCCTTATCACTGATCCACCTCAAGGCCCAATCGG 368056 Query 14406 AtttttttttAATAAAATCCATTGTTTCAATAGCATTAAATAA-ATGT-TCCTTCTCTTT 14463 |||||| || ||| | || | ||||| |||||||| || | || ||| | Sbjct 368055 CTTTTTTCTTGATACATGGGATGTTGTCAATTGCATTAAACAAGAAGTCGGATTCCTTGG 367996 Query 14464 AGTACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCCAT 14523 || |||| ||||| || ||||| | ||| || | || || || || || ||||| Sbjct 367995 GGTCCTTG--ATGTAGGTGTCAATCAACAAGGAGTAGGTCTCCGAATGAATATTCTCCAT 367938 Query 14524 AGCTATCTGAAAACCATAAAAACATCTAGCTTCTGACCATTGTACCTCTGAGTAAAATCT 14583 ||||| || ||||| || || | || || | || ||||| || |||| | Sbjct 367937 CATGATCTGGAATCCATAGAAGCACTTTGCCTCAGGGATCTGCACCTCGGAAGAAAAGTT 367878 Query 14584 TTCGGCCAAATTTTCATTAACTATACCATCACTAGCTGCAAAAAATGCCAA 14634 ||| |||| ||||| || || || || ||| || ||||| || ||||| Sbjct 367877 TTCTACCAAGTTTTCGTTGACGATTCCGTCAGAGGCAGCAAAGAAGGCCAA 367827 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 482344671484720