Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Metschnikowia_20australis_20[genbank_20GCA_5F002073855.1_202017-03- 29] 154 sequences; 14,350,841 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq68 116 7e-21 >seq68 Length=1116518 Score = 116 bits (128), Expect = 7e-21 Identities = 571/892 (64%), Gaps = 80/892 (9%) Strand=Plus/Plus Query 101503 CCATGAAGATCTCTGGGAAATGTACAAAAAAGAGGTTGCCTGTTTTTGGACATTGGAAGA 101562 |||||||| ||||| | |||||||| |||| | || | ||| ||||| || || Sbjct 367694 CCATGAAG---TCTGGCAGATGTACAAGAAAGCCGAGGCGTCTTTCTGGACCGCCGAGGA 367750 Query 101563 GATTGATTT--CGAAAGGGATCCTAAAGATTGGGAGAA---ACTCACTCAAGATGAGAAG 101617 ||| || || | || | ||| || || ||| | || | | || | |||||| | Sbjct 367751 GATCGACTTGTCCAAGGACATC--AACGACTGGAACAACAAAATGACCGACAATGAGAGG 367808 Query 101618 GATTTCATTCTCCAGATTCT-GGCGTTCTTTGCATCCTCTGACGGAATTGTAATTGAAAA 101676 |||||| ||| | | | ||| |||||||| ||||||||||||| || | ||||| Sbjct 367809 TTTTTCAT-CTCGCGTGTGTTGGCCTTCTTTGCTGCCTCTGACGGAATCGTCAACGAAAA 367867 Query 101677 TCT--TACAACACGTCTTCGTCAAGTGGCGCAGATTCCAGAAGCGAGGAGTTTCTTTGAC 101734 | || || || | ||| || | || |||||| || || || | | | |||| || Sbjct 367868 CTTGGTAGAAAACTT-TTCTTCC-GAGGTGCAGATCCCTGAGGCAAAGTGCTTCTATGGA 367925 Query 101735 TTCCAAGTTGGAATGGAGAGTATTCAT--GGCAACGTCTACGGAGAACTGATTGATAGAC 101792 ||||| | ||||||| ||||||| || || |||| || ||||| ||| Sbjct 367926 TTCCAGATCATGATGGAGAATATTCATTCGGAGAC--CTACTC----CTTGTTGATTGAC 367979 Query 101793 TGGTGCCCGACGAAAAAGAC---AAGG----CTA--TCTTGTTTAACGC--TGCACAACA 101841 || || || ||| |||| | | |||||||||| || | |||||| Sbjct 367980 A-----CCTACATCAAGGACCCCAAGGAATCCGACTTCTTGTTTAATGCAATTGACAACA 368034 Query 101842 CTTCCCCGCCATCAAGAAGAAGGAGCAGTGGGCTATTAATTGGATGCAAAGCAATAACGA 101901 |||| |||||||| || | | ||||| | | ||||| || |||| || Sbjct 368035 --TCCCATGTATCAAGAAAAAAGCCGATTGGGCCTTGAGGTGGATC---AGTGATAAGGA 368089 Query 101902 -------TTTGGCGGAACTAATTGTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTG 101954 ||||||| | | | |||||||| ||||| ||||| || |||| || | Sbjct 368090 GGCCTTGTTTGGCGAGAG-ATTGGTTGCCTTCGCTGCCGTTGAGGGTGTCTTTTTCTCAG 368148 Query 101955 GTGCATTCGCATCCATTTTCTGGATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCT 102014 | |||| || || || |||||| | ||||| || || | ||||||| ||||| | | Sbjct 368149 GCTCATTTGCCTCGATCTTCTGGTTAAAGAAGAGAGGCTTGATGCCTGGCCTCACGTTTT 368208 Query 102015 CCAATGAGTTCATTTCTAGGGACGAAGGTCTTCATCGCGACTTTGCATGCATGCTGTT-- 102072 | || ||||| |||| | ||||| || | || |||||||| || || |||| Sbjct 368209 CAAACGAGTTGATTTGCCGTGACGAGGGCTTGCACACTGACTTTGCTTGTTTGTTGTTCT 368268 Query 102073 -------GAAAAAGGGTTTTGTTGATACCCCATCAAGAGAAAGGATTCTTGA---AATTG 102122 |||||| | |||| ||| ||| ||| | || ||||| Sbjct 368269 CGCACTTGAAAAACAG----------ACCCGCCCAA---AAA--ATTGTCGAGAGAATTG 368313 Query 102123 TCACTGAAGCCGTCCGAATTGAACAAGAATTTCTCACAGTTTCCCTGCCTGTTAAATTAG 102182 | || || || || ||||| | || | |||| | |||| |||| || || Sbjct 368314 TTACCGAGGCTGTTTCCATTGAGAAGGAGTACTTCACGGATTCCTTGCCATCTAGCTTGT 368373 Query 102183 TGGGAATGAACTGCAAGTTGATGAGCCAGTACATTGAATTTGTGGCAGATAAACTATTGG 102242 |||| |||||| |||| |||||| ||||||| | || ||||| || || | | | | | Sbjct 368374 TGGGTATGAACAGCAACTTGATGTGCCAGTATGTGGAGTTTGTCGCCGACAGATTGCTCG 368433 Query 102243 TTGAAATGGGACTAGAAAAGCACTATAATGTTACCAACCCCTTCCCATTCATGGACAATA 102302 ||| | || ||||| || |||||||||||||| ||| |||||||| || | Sbjct 368434 TTGCCTTAGGCAACAAAAAGGTGTACAATGTTACCAACCCATTCGACTTCATGGAAAACA 368493 Query 102303 TTTCCCTCGAGAATAAGACCAACTTTTTTGAAAAGAGAGTCGCCGAGTATCA 102354 |||| | | |||||||||||| || || |||||||| |||| || || Sbjct 368494 TTTCTTTGGCTGGTAAGACCAACTTCTTCGAGAAGAGAGTATCCGACTACCA 368545 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989582047427070