Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Metschnikowia_20australis_20[genbank_20GCA_5F002073855.1_202017-03- 29] 154 sequences; 14,350,841 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq68 201 1e-46 >seq68 Length=1116518 Score = 201 bits (222), Expect = 1e-46 Identities = 564/859 (66%), Gaps = 10/859 (1%) Strand=Plus/Minus Query 33312 TTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTTTCCATGAAATCAAACGGATTG 33371 || ||||| || || || || || |||| || || ||||||||||| || || || ||| Sbjct 368527 TTCTCGAAGAAGTTGGTCTTACCAGCCAAAGAAATGTTTTCCATGAAGTCGAATGGGTTG 368468 Query 33372 GTAACATTGTAAAtttttttAAATCCCAATTCAGAAATCAATCTATCTGCGACGAATTCT 33431 ||||||||||| | ||||| || || || | |||||| || ||||| || || Sbjct 368467 GTAACATTGTACACCTTTTTGTTGCCTAAGGCAACGAGCAATCTGTCGGCGACAAACTCC 368408 Query 33432 ATATATGTTTTCATCATTTCACAATTCATTCCTATGAGTTTAACTGGAAGAGCCACAGT- 33490 | ||| ||||| | | ||||| || | | || ||| | | | || Sbjct 368407 ACATACTGGCACATCAAGTTGCTGTTCATACCCAACAAGCTAGATGGCAAGGAATCCGTG 368348 Query 33491 AAGAAATTCTTGTTCAATGGATACCGCATTTGTTATAATAAATCTA-ACGGTTTCTTCAC 33549 ||| | | ||| | ||||||| || || | || | ||| ||| || ||| || Sbjct 368347 AAGTACTCCTTCT-CAATGGAAACAGCCTCGGTAACAATTC-TCTCGACAATTTTTTGGG 368290 Query 33550 TCGGTGGATGTAATAAATGTTTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCGT 33609 ||| | | || || |||| |||||| || || || ||||| ||||||| Sbjct 368289 CGGGTCTGTTTTTCAAGTGCGAGAACAACAAACAAGCAAAGTCAGTGTGCAAGCCCTCGT 368230 Query 33610 CTCTACTAATTAATTCGTTAGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCC 33669 | | | ||| || ||||| ||||||||||| || ||||| | ||| | ||| || | || Sbjct 368229 CACGGCAAATCAACTCGTTTGAAAACGTGAGGCCAGGCATCAAGCCTCTCTTCTTTAACC 368170 Query 33670 AAAATATGGAAGCGAATGATCCGGAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAA 33729 | || || || || ||||| || || || |||| || || || ||||| ||||||| | Sbjct 368169 AGAAGATCGAGGCAAATGAGCCTGAGAAAAAGACACCCTCAACGGCAGCGAAGGCAACCA 368110 Query 33730 GTCTCTCTCCATAACCGG---CGCTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCT 33786 |||||| ||| | || | | ||| |||||| | ||||||||||| || | Sbjct 368109 ATCTCTCGCCAAACAAGGCCTCCTTATCACTGATCCACCTCAAGGCCCAATCGGCTTTTT 368050 Query 33787 TTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATAGtttttttCATTACTATCTT 33846 | || | ||| || || | || || |||||||| | ||| ||| || || | Sbjct 368049 TCTTGATACATGGGATGTTGTCAATTGCATTAAACAAGAAGTCGGATTCCTTGGGGTCCT 367990 Query 33847 TAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATCT 33906 | | || || || ||||| | || | ||||||||||| || || || |||| Sbjct 367989 TGATGTAGGTGTCAATCAACAAGGAGTAGGTCTCCGAATGAATATTCTCCATCATGATCT 367930 Query 33907 GAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACTTCTGTACAAAATCGTTCTGCTA 33966 | ||||| ||||| || | ||||| | |||||||| || | | |||| |||| | | Sbjct 367929 GGAATCCATAGAAGCACTTTGCCTCAGGGATCTGCACCTCGGAAGAAAAGTTTTCTACCA 367870 Query 33967 AATTTTCATTCACTATTCCATCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAAT 34026 | ||||| || || ||||| ||| ||| ||||| || ||||| ||| | || ||| Sbjct 367869 AGTTTTCGTTGACGATTCCGTCAGAGGCAGCAAAGAAGGCCAACACACGCGAGATGAAAA 367810 Query 34027 ATTTTTC---GTCTGGTGTTAGTTTATTCCAATCATTGATATCTTTAGATATATCCACTT 34083 | | || ||| | || || ||||| || ||||| || || || | || | | Sbjct 367809 ACCTCTCATTGTCGGTCATTTTGTTGTTCCAGTCGTTGATGTCCTTGGACAAGTCGATCT 367750 Query 34084 CTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATT 34143 | || | ||||| || || ||||| || || || ||||| | ||||| ||||| || | Sbjct 367749 CCTCGGCGGTCCAGAAAGACGCCTCGGCTTTCTTGTACATCTGCCAGACTTCATGGTACT 367690 Query 34144 GGATTGGGAAAATAACAAA 34162 ||| || || | ||||| Sbjct 367689 TGATAGGAAACAACACAAA 367671 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629816387601120