Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Metschnikowia_20australis_20[genbank_20GCA_5F002073855.1_202017-03- 29] 154 sequences; 14,350,841 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq68 188 9e-43 >seq68 Length=1116518 Score = 188 bits (208), Expect = 9e-43 Identities = 560/858 (65%), Gaps = 8/858 (1%) Strand=Plus/Minus Query 35888 TTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATTTTCCATGAAATCGAATGGATTG 35947 || ||||| || || || ||||| | || || || ||||||||||| |||||||| ||| Sbjct 368527 TTCTCGAAGAAGTTGGTCTTACCAGCCAAAGAAATGTTTTCCATGAAGTCGAATGGGTTG 368468 Query 35948 ATAACATTATAAAtttttttAAATCCCAATTCAGAAATCAATCTATCTGCGACAAATTCT 36007 ||||||| || | ||||| || || || | |||||| || |||||||| || Sbjct 368467 GTAACATTGTACACCTTTTTGTTGCCTAAGGCAACGAGCAATCTGTCGGCGACAAACTCC 368408 Query 36008 ATATATGTTTTCATCATTTCACAATTCATTCCTATAAGTTTAACTGGAAGAGCCACAGT- 36066 | ||| ||||| | | ||||| || | | || ||| | | | || Sbjct 368407 ACATACTGGCACATCAAGTTGCTGTTCATACCCAACAAGCTAGATGGCAAGGAATCCGTG 368348 Query 36067 AAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAATAGATATTACTGTTTCTTCACT 36126 ||| | | ||| | |||| || || || || || | ||| || ||| || Sbjct 368347 AAGTACTCCTTCT-CAATGGAAACAGCCTCGGTAACAATTCTCTCGACAATTTTTTGGGC 368289 Query 36127 CGGTGGATACAATAAATGTTTAAACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTC 36186 ||| | || || |||| |||||| || || || ||| | |||||||| Sbjct 368288 GGGTCTGTTTTTCAAGTGCGAGAACAACAAACAAGCAAAGTCAGTGTGCAAGCCCTCGTC 368229 Query 36187 TCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCA 36246 | | ||| || ||||| ||||||||||| || ||||| | ||| | ||| || | ||| Sbjct 368228 ACGGCAAATCAACTCGTTTGAAAACGTGAGGCCAGGCATCAAGCCTCTCTTCTTTAACCA 368169 Query 36247 AAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAG 36306 || || || |||||||| || || || || | || || || || || ||||||| | Sbjct 368168 GAAGATCGAGGCAAATGAGCCTGAGAAAAAGACACCCTCAACGGCAGCGAAGGCAACCAA 368109 Query 36307 TCTCTCTCCATAACCGG---CACTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTT 36363 |||||| ||| | || | | ||| |||||| | ||||||||||| || || Sbjct 368108 TCTCTCGCCAAACAAGGCCTCCTTATCACTGATCCACCTCAAGGCCCAATCGGCTTTTTT 368049 Query 36364 TTTTACACAAGGCATTGTCTCTATAGCATTAAAGAGATAGtttttttCATTACTATCTTT 36423 || | ||| || || | || || |||||||| | ||| ||| || || || Sbjct 368048 CTTGATACATGGGATGTTGTCAATTGCATTAAACAAGAAGTCGGATTCCTTGGGGTCCTT 367989 Query 36424 AACATATGTATCAATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATTTG 36483 | || || |||||||| | || | ||||||||||| || || || || || Sbjct 367988 GATGTAGGTGTCAATCAACAAGGAGTAGGTCTCCGAATGAATATTCTCCATCATGATCTG 367929 Query 36484 AAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTCTGCTAA 36543 ||||| ||||| || | ||||| | ||||| || || | | |||| |||| | || Sbjct 367928 GAATCCATAGAAGCACTTTGCCTCAGGGATCTGCACCTCGGAAGAAAAGTTTTCTACCAA 367869 Query 36544 ATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATA 36603 ||||| || || ||||||||| ||| ||||| || ||||| ||| | || ||| | Sbjct 367868 GTTTTCGTTGACGATTCCGTCAGAGGCAGCAAAGAAGGCCAACACACGCGAGATGAAAAA 367809 Query 36604 TTTTTCGT--TTGGT-GTTAGTTTATTCCAATCATTGATATCTTTAGATATATCCACTTC 36660 | || | | ||| || || ||||| || ||||| || || || | || | || Sbjct 367808 CCTCTCATTGTCGGTCATTTTGTTGTTCCAGTCGTTGATGTCCTTGGACAAGTCGATCTC 367749 Query 36661 TTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTG 36720 || | ||||| || || ||||| || || || ||||| | ||||| ||||| || | Sbjct 367748 CTCGGCGGTCCAGAAAGACGCCTCGGCTTTCTTGTACATCTGCCAGACTTCATGGTACTT 367689 Query 36721 AATTGGAAAAATAACAAA 36738 || ||||| | ||||| Sbjct 367688 GATAGGAAACAACACAAA 367671 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658171533017360