Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Metschnikowia_20australis_20[genbank_20GCA_5F002073855.1_202017-03- 29] 154 sequences; 14,350,841 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq68 201 2e-46 >seq68 Length=1116518 Score = 201 bits (222), Expect = 2e-46 Identities = 565/859 (66%), Gaps = 10/859 (1%) Strand=Plus/Minus Query 49690 TTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTTTCCATGAAATCAAACGGATTG 49749 || ||||| || || || || || |||| || || ||||||||||| || || || ||| Sbjct 368527 TTCTCGAAGAAGTTGGTCTTACCAGCCAAAGAAATGTTTTCCATGAAGTCGAATGGGTTG 368468 Query 49750 GTAACATTATAAAtttttttAAATCCCAATTCAGAAATCAATCTATCCGCGACAAATTCT 49809 |||||||| || | ||||| || || || | |||||| || |||||||| || Sbjct 368467 GTAACATTGTACACCTTTTTGTTGCCTAAGGCAACGAGCAATCTGTCGGCGACAAACTCC 368408 Query 49810 ATATATGTTTTCATCATTTCACAATTCATTCCTATAAGTTTAACTGGAAGAGCCGCAGT- 49868 | ||| ||||| | | ||||| || | | || ||| | | | || Sbjct 368407 ACATACTGGCACATCAAGTTGCTGTTCATACCCAACAAGCTAGATGGCAAGGAATCCGTG 368348 Query 49869 AAGAAATTCTTGTTCAATGGATACCGCATCTGTTATAATAGATCTA-ACGGTTTCTTCAC 49927 ||| | | ||| | ||||||| || || || || | ||| ||| || ||| || Sbjct 368347 AAGTACTCCTTCT-CAATGGAAACAGCCTCGGTAACAATTC-TCTCGACAATTTTTTGGG 368290 Query 49928 TCGGTGGATGCAATAAATGTTTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCGT 49987 ||| | || || |||| |||||| || || || ||||| ||||||| Sbjct 368289 CGGGTCTGTTTTTCAAGTGCGAGAACAACAAACAAGCAAAGTCAGTGTGCAAGCCCTCGT 368230 Query 49988 CTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCC 50047 | | | ||| | ||||| ||||||||||| || ||||| | ||| | ||| || | || Sbjct 368229 CACGGCAAATCAACTCGTTTGAAAACGTGAGGCCAGGCATCAAGCCTCTCTTCTTTAACC 368170 Query 50048 AAAATATGGACGCAAATGACCCAGAAAAGAAGATTCCTTCTACTGCGGCAAAGGCAACAA 50107 | || || || |||||||| || || || |||| || || || || || |||||||| | Sbjct 368169 AGAAGATCGAGGCAAATGAGCCTGAGAAAAAGACACCCTCAACGGCAGCGAAGGCAACCA 368110 Query 50108 GTCTCTCTCCATAACTGG---CGCTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCT 50164 |||||| ||| | || | | ||| |||||| | ||||||||||| || | Sbjct 368109 ATCTCTCGCCAAACAAGGCCTCCTTATCACTGATCCACCTCAAGGCCCAATCGGCTTTTT 368050 Query 50165 TTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATAGtttttttCATTACTATCTT 50224 | || | ||| || || | || || |||||||| | ||| ||| || || | Sbjct 368049 TCTTGATACATGGGATGTTGTCAATTGCATTAAACAAGAAGTCGGATTCCTTGGGGTCCT 367990 Query 50225 TAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATCT 50284 | | || || || ||||| | || | ||||||||||| || || || |||| Sbjct 367989 TGATGTAGGTGTCAATCAACAAGGAGTAGGTCTCCGAATGAATATTCTCCATCATGATCT 367930 Query 50285 GAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACTTCTGTACAAAATCGTTCAGCTA 50344 | ||||| ||||| || | ||||| | |||||||| || | | |||| ||| | | Sbjct 367929 GGAATCCATAGAAGCACTTTGCCTCAGGGATCTGCACCTCGGAAGAAAAGTTTTCTACCA 367870 Query 50345 AATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAAT 50404 | ||||| || || ||||||||| ||| ||||| || ||||| ||| | || ||| Sbjct 367869 AGTTTTCGTTGACGATTCCGTCAGAGGCAGCAAAGAAGGCCAACACACGCGAGATGAAAA 367810 Query 50405 GTTTTTCGTTG--GGT-GTTAGTTTATTCCAATCATTGATATCTTTAGATATATCTACTT 50461 | || ||| ||| || || ||||| || ||||| || || || | || | | Sbjct 367809 ACCTCTCATTGTCGGTCATTTTGTTGTTCCAGTCGTTGATGTCCTTGGACAAGTCGATCT 367750 Query 50462 CTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATT 50521 | || | ||||| || || ||||| || || || ||||| | ||||| ||||| || | Sbjct 367749 CCTCGGCGGTCCAGAAAGACGCCTCGGCTTTCTTGTACATCTGCCAGACTTCATGGTACT 367690 Query 50522 GGATTGGGAAAATAACAAA 50540 ||| || || | ||||| Sbjct 367689 TGATAGGAAACAACACAAA 367671 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718267417332560