Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Metschnikowia_20australis_20[genbank_20GCA_5F002073855.1_202017-03- 29] 154 sequences; 14,350,841 total letters Query= NC_004002.1 Length=149955 Score E Sequences producing significant alignments: (Bits) Value seq68 127 2e-24 >seq68 Length=1116518 Score = 127 bits (140), Expect = 2e-24 Identities = 291/436 (67%), Gaps = 4/436 (1%) Strand=Plus/Minus Query 13869 AAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTT 13928 ||||| ||||| ||| || | |||||| || | | ||| | ||||||||||| || Sbjct 368260 AAACAAGCAAAGTCAGTGTGCAAGCCCTCGTCACGGCAAATCAACTCGTTTGAAAACGTG 368201 Query 13929 AATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCAAATGACCCGGAAAAG 13988 | || |||||||| |||| || |||||||| || || | |||||||| || || || Sbjct 368200 AGGCCAGGCATCAAGCCTCTCTTCTTTAACCAGAAGATCGAGGCAAATGAGCCTGAGAAA 368141 Query 13989 AATATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTTGTTC 14048 || | |||||||| ||||| || || | |||| || |||||| | || | || | Sbjct 368140 AAGACACCCTCAACGGCAGCGAAGGCAACCAATCTCTCGCCAAACAAGGCCTCCTTATCA 368081 Query 14049 GATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATAGCA 14108 ||||| | ||||| || | |||||| || ||| | || | ||||| ||| Sbjct 368080 CTGATCCACCTCAAGGCCCAATCGGCTTTTTTCTTGATACATGGGATGTTGTCAATTGCA 368021 Query 14109 TTAAATAAATATTC--CTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAGCTAT 14166 ||||| || | || ||| | || |||| ||||| || ||||| | ||| | Sbjct 368020 TTAAACAAGAAGTCGGATTCCTTGGGGTCCTTG--ATGTAGGTGTCAATCAACAAGGAGT 367963 Query 14167 ACATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAGCATCTAGCTTCCG 14226 | | || || || || || ||||| ||||| || ||||| ||||| | || || | Sbjct 367962 AGGTCTCCGAATGAATATTCTCCATCATGATCTGGAATCCATAGAAGCACTTTGCCTCAG 367903 Query 14227 ACCATTGTACTTCCGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCACTAG 14286 || || || || |||| |||| |||| ||||| || || || || ||| | Sbjct 367902 GGATCTGCACCTCGGAAGAAAAGTTTTCTACCAAGTTTTCGTTGACGATTCCGTCAGAGG 367843 Query 14287 CTGCAAAAAATGCCAA 14302 | ||||| || ||||| Sbjct 367842 CAGCAAAGAAGGCCAA 367827 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 479727076523600