Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Metschnikowia_20australis_20[genbank_20GCA_5F002073855.1_202017-03-
29] 154 sequences; 14,350,841 total letters
Query= NC_004003.1
Length=149599
Score E
Sequences producing significant alignments: (Bits) Value
seq68 122 8e-23
>seq68
Length=1116518
Score = 122 bits (134), Expect = 8e-23
Identities = 459/711 (65%), Gaps = 8/711 (1%)
Strand=Plus/Minus
Query 13384 ACTCTTTTTTCAAAAAAGTTAGTTTTACCTTCCAGTGATATATTTTCCATAAAATCGAAT 13443
||||| || || || ||||| || ||||| ||| || || |||||||| || ||||||
Sbjct 368533 ACTCTCTTCTCGAAGAAGTTGGTCTTACCAGCCAAAGAAATGTTTTCCATGAAGTCGAAT 368474
Query 13444 GGATTTGTTGACATAA-ACACTTTATCACAACCTAGTTCTAATAATAATCTATCAGCAAT 13502
|| || || |||| |||| || | |||| | | | ||||| || || |
Sbjct 368473 GGGTTGGTA-ACATTGTACACCTTTTTGTTGCCTAAGGCAACGAGCAATCTGTCGGCGAC 368415
Query 13503 AAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTA-GTTTTACAGGAATTA 13561
|||||| | ||| || |||| || | | |||||||| | | | | | | || |
Sbjct 368414 AAACTCCACATACTGGCACATCAAGTTGCTGTTCATACCCAACAAGCTAGATGGCAAGGA 368355
Query 13562 TATTAGTTAAAAATTCTTTTTCTATAGACACAGCCTCGTTTATAATAATCTTAATAATGT 13621
|| || || | || || || || || ||||||||| | | ||| ||| | ||| |
Sbjct 368354 -ATCCGTGAAGTACTCCTTCTCAATGGAAACAGCCTCGGTAACAATTCTCTCGACAATTT 368296
Query 13622 CATTAGAAGGAGGATATTTTAGATGTTTAAAAATTAAACACGCAAAATCACAATGAAGGC 13681
| | || | ||| | || || | ||||| ||||| ||| || | ||
Sbjct 368295 TTTGGGCGGGTCTGTTTTTCAAGTGCGAGAACAACAAACAAGCAAAGTCAGTGTGCAAGC 368236
Query 13682 CCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGttttt 13741
|||| || | | ||| | ||||||||||| || | || |||||||| |||| || |
Sbjct 368235 CCTCGTCACGGCAAATCAACTCGTTTGAAAACGTGAGGCCAGGCATCAAGCCTCTCTTCT 368176
Query 13742 ttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCTCAACTGCAGCAAACG 13801
||||||| || || | || ||||| || || || || | |||||||| ||||| || |
Sbjct 368175 TTAACCAGAAGATCGAGGCAAATGAGCCTGAGAAAAAGACACCCTCAACGGCAGCGAAGG 368116
Query 13802 CTATTAGTCGTTCTCCAAACGATGCTTTTTTGTTTGATATCCATTTTCTAGCCCATTCAG 13861
| | | || || |||||| | || | || | ||||| | ||||| || |
Sbjct 368115 CAACCAATCTCTCGCCAAACAAGGCCTCCTTATCACTGATCCACCTCAAGGCCCAATCGG 368056
Query 13862 AtttttttttAATAAAATCCATTGTTTCGATTGCATTGAATAA-ATGT-TCCTTCTCTTT 13919
|||||| || ||| | || | || |||||||| || || | || ||| |
Sbjct 368055 CTTTTTTCTTGATACATGGGATGTTGTCAATTGCATTAAACAAGAAGTCGGATTCCTTGG 367996
Query 13920 AGTACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCTAT 13979
|| |||| ||||| || ||||| | ||| || | || || || || || || ||
Sbjct 367995 GGTCCTTG--ATGTAGGTGTCAATCAACAAGGAGTAGGTCTCCGAATGAATATTCTCCAT 367938
Query 13980 AGCTATCTGAAAACCATAAAAACATCTAGCTTCTGACCATTGTACCTCCGAGTAAAATCT 14039
||||| || ||||| || || | || || | || ||||| || |||| |
Sbjct 367937 CATGATCTGGAATCCATAGAAGCACTTTGCCTCAGGGATCTGCACCTCGGAAGAAAAGTT 367878
Query 14040 TTCTGCCAAGTTTTCATTAACAATACCATCACTAGCTGCAAAAAATGCCAA 14090
|||| |||||||||| || || || || ||| || ||||| || |||||
Sbjct 367877 TTCTACCAAGTTTTCGTTGACGATTCCGTCAGAGGCAGCAAAGAAGGCCAA 367827
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 478587878716560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |