Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Metschnikowia_20australis_20[genbank_20GCA_5F002073855.1_202017-03- 29] 154 sequences; 14,350,841 total letters Query= NC_004003.1 Length=149599 Score E Sequences producing significant alignments: (Bits) Value seq68 122 8e-23 >seq68 Length=1116518 Score = 122 bits (134), Expect = 8e-23 Identities = 459/711 (65%), Gaps = 8/711 (1%) Strand=Plus/Minus Query 13384 ACTCTTTTTTCAAAAAAGTTAGTTTTACCTTCCAGTGATATATTTTCCATAAAATCGAAT 13443 ||||| || || || ||||| || ||||| ||| || || |||||||| || |||||| Sbjct 368533 ACTCTCTTCTCGAAGAAGTTGGTCTTACCAGCCAAAGAAATGTTTTCCATGAAGTCGAAT 368474 Query 13444 GGATTTGTTGACATAA-ACACTTTATCACAACCTAGTTCTAATAATAATCTATCAGCAAT 13502 || || || |||| |||| || | |||| | | | ||||| || || | Sbjct 368473 GGGTTGGTA-ACATTGTACACCTTTTTGTTGCCTAAGGCAACGAGCAATCTGTCGGCGAC 368415 Query 13503 AAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTA-GTTTTACAGGAATTA 13561 |||||| | ||| || |||| || | | |||||||| | | | | | | || | Sbjct 368414 AAACTCCACATACTGGCACATCAAGTTGCTGTTCATACCCAACAAGCTAGATGGCAAGGA 368355 Query 13562 TATTAGTTAAAAATTCTTTTTCTATAGACACAGCCTCGTTTATAATAATCTTAATAATGT 13621 || || || | || || || || || ||||||||| | | ||| ||| | ||| | Sbjct 368354 -ATCCGTGAAGTACTCCTTCTCAATGGAAACAGCCTCGGTAACAATTCTCTCGACAATTT 368296 Query 13622 CATTAGAAGGAGGATATTTTAGATGTTTAAAAATTAAACACGCAAAATCACAATGAAGGC 13681 | | || | ||| | || || | ||||| ||||| ||| || | || Sbjct 368295 TTTGGGCGGGTCTGTTTTTCAAGTGCGAGAACAACAAACAAGCAAAGTCAGTGTGCAAGC 368236 Query 13682 CCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGttttt 13741 |||| || | | ||| | ||||||||||| || | || |||||||| |||| || | Sbjct 368235 CCTCGTCACGGCAAATCAACTCGTTTGAAAACGTGAGGCCAGGCATCAAGCCTCTCTTCT 368176 Query 13742 ttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCTCAACTGCAGCAAACG 13801 ||||||| || || | || ||||| || || || || | |||||||| ||||| || | Sbjct 368175 TTAACCAGAAGATCGAGGCAAATGAGCCTGAGAAAAAGACACCCTCAACGGCAGCGAAGG 368116 Query 13802 CTATTAGTCGTTCTCCAAACGATGCTTTTTTGTTTGATATCCATTTTCTAGCCCATTCAG 13861 | | | || || |||||| | || | || | ||||| | ||||| || | Sbjct 368115 CAACCAATCTCTCGCCAAACAAGGCCTCCTTATCACTGATCCACCTCAAGGCCCAATCGG 368056 Query 13862 AtttttttttAATAAAATCCATTGTTTCGATTGCATTGAATAA-ATGT-TCCTTCTCTTT 13919 |||||| || ||| | || | || |||||||| || || | || ||| | Sbjct 368055 CTTTTTTCTTGATACATGGGATGTTGTCAATTGCATTAAACAAGAAGTCGGATTCCTTGG 367996 Query 13920 AGTACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCTAT 13979 || |||| ||||| || ||||| | ||| || | || || || || || || || Sbjct 367995 GGTCCTTG--ATGTAGGTGTCAATCAACAAGGAGTAGGTCTCCGAATGAATATTCTCCAT 367938 Query 13980 AGCTATCTGAAAACCATAAAAACATCTAGCTTCTGACCATTGTACCTCCGAGTAAAATCT 14039 ||||| || ||||| || || | || || | || ||||| || |||| | Sbjct 367937 CATGATCTGGAATCCATAGAAGCACTTTGCCTCAGGGATCTGCACCTCGGAAGAAAAGTT 367878 Query 14040 TTCTGCCAAGTTTTCATTAACAATACCATCACTAGCTGCAAAAAATGCCAA 14090 |||| |||||||||| || || || || ||| || ||||| || ||||| Sbjct 367877 TTCTACCAAGTTTTCGTTGACGATTCCGTCAGAGGCAGCAAAGAAGGCCAA 367827 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478587878716560