Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Metschnikowia_20australis_20[genbank_20GCA_5F002073855.1_202017-03- 29] 154 sequences; 14,350,841 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq68 174 2e-38 >seq68 Length=1116518 Score = 174 bits (192), Expect = 2e-38 Identities = 397/596 (67%), Gaps = 6/596 (1%) Strand=Plus/Minus Query 42056 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAA 42115 |||| |||||| || || || ||||| ||||| || | | ||| || ||||| ||| Sbjct 368266 AACAACAAACAAGCAAAGTCAGTGTGCAAGCCCTCGTCACGGCAAATCAACTCGTTTGAA 368207 Query 42116 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCA 42175 |||||||| || ||||| | ||| | ||| || | ||| || || || |||||||| || Sbjct 368206 AACGTGAGGCCAGGCATCAAGCCTCTCTTCTTTAACCAGAAGATCGAGGCAAATGAGCCT 368147 Query 42176 GAAAAGAAGATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGG---CA 42232 || || |||| || || || || || ||||||| | |||||| ||| | || | Sbjct 368146 GAGAAAAAGACACCCTCAACGGCAGCGAAGGCAACCAATCTCTCGCCAAACAAGGCCTCC 368087 Query 42233 CTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCT 42292 | ||| |||||| | ||||||||||| || || || | ||| || || | || Sbjct 368086 TTATCACTGATCCACCTCAAGGCCCAATCGGCTTTTTTCTTGATACATGGGATGTTGTCA 368027 Query 42293 ATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCGATCAAAAGA 42352 || |||||||| | ||| ||| || || || | || || || ||||| | Sbjct 368026 ATTGCATTAAACAAGAAGTCGGATTCCTTGGGGTCCTTGATGTAGGTGTCAATCAACAAG 367967 Query 42353 CTATACATTTCTGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCC 42412 || | || |||||||| || || || ||||| ||||| ||||| || | ||| Sbjct 367966 GAGTAGGTCTCCGAATGAATATTCTCCATCATGATCTGGAATCCATAGAAGCACTTTGCC 367907 Query 42413 TCGGTAACCTGTACTTCTGTACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGTCA 42472 || | | ||| || || | | |||| ||| | || |||||||| || ||||||||| Sbjct 367906 TCAGGGATCTGCACCTCGGAAGAAAAGTTTTCTACCAAGTTTTCGTTGACGATTCCGTCA 367847 Query 42473 CTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTC---GTCCGGTGTTAAT 42529 ||| ||||| || ||||| ||| | || ||| | | || ||| | || Sbjct 367846 GAGGCAGCAAAGAAGGCCAACACACGCGAGATGAAAAACCTCTCATTGTCGGTCATTTTG 367787 Query 42530 TTATTCCAATCATTGATATCTTTAGATATATCTACTTCTTCTACCGTCCAAAATGATGCT 42589 || ||||| || ||||| || || || | || | || || | ||||| || || || Sbjct 367786 TTGTTCCAGTCGTTGATGTCCTTGGACAAGTCGATCTCCTCGGCGGTCCAGAAAGACGCC 367727 Query 42590 TCTGCCTTTTTATACATATTCCAGATATCATGATATTGAATTGGGAAAATAACAAA 42645 || || || || ||||| | ||||| ||||| || | || || || | ||||| Sbjct 367726 TCGGCTTTCTTGTACATCTGCCAGACTTCATGGTACTTGATAGGAAACAACACAAA 367671 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671137908057040