Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Metschnikowia_20australis_20[genbank_20GCA_5F002073855.1_202017-03- 29] 154 sequences; 14,350,841 total letters Query= NC_004117.1 Length=158482 Score E Sequences producing significant alignments: (Bits) Value seq68 113 5e-20 >seq68 Length=1116518 Score = 113 bits (124), Expect = 5e-20 Identities = 291/429 (68%), Gaps = 21/429 (5%) Strand=Plus/Plus Query 50437 GTTGAAGGTGTGtttttttCCGGTAGCTTTGCAGCCATATTTTACATTAAAACCTTAGGC 50496 ||||| ||||| ||||| || || ||||| | || || | | || | |||| Sbjct 368127 GTTGAGGGTGTCTTTTTCTCAGGCTCATTTGCCTCGATCTTCTGGTTAAAGAAGAGAGGC 368186 Query 50497 ATAATGCCCGGCCTCACGTTTAGCAACGAGTTGATTTCGCGCGACGAAGGAATGCACACA 50556 | ||||| |||||||||||| ||||||||||||| || ||||| || ||||||| Sbjct 368187 TTGATGCCTGGCCTCACGTTTTCAAACGAGTTGATTTGCCGTGACGAGGGCTTGCACACT 368246 Query 50557 GACTTTGCGTGTTTGTACTACAATACGCGCGTAAATGAAAAATTATCATACGAAACAATT 50616 |||||||| ||||||| | | ||| | | | |||| | | | ||| |||| Sbjct 368247 GACTTTGCTTGTTTGTTGTTC---TCGCACTTGA---AAAACAGACCCGCCCAAAAAATT 368300 Query 50617 TTGGACA----TGTTCAAAGAAGCCGTCGACATCGAAAAAGAGTTTTTCACGGACGCTTT 50672 | || | |||| | || || || ||| || || |||| |||||||| | || Sbjct 368301 GTCGAGAGAATTGTT-ACCGAGGCTGTTTCCATTGAGAAGGAGTACTTCACGGATTCCTT 368359 Query 50673 ACC-CGTGGCATTGTTGGGCATGAAC-GCAGACATGATGTGCGAGTACATTGAGTTTGTT 50730 || | || |||||||| |||||| ||| || |||||||| |||| | |||||||| Sbjct 368360 GCCATCTAGC-TTGTTGGGTATGAACAGCA-ACTTGATGTGCCAGTATGTGGAGTTTGTC 368417 Query 50731 GCAGACAGATTG-TTGTTGCAGCTGGGACAACCGAAA-TACTATAATGCACGTAACCCCT 50788 || ||||||||| | ||||| || | |||| ||| || |||| ||||| | Sbjct 368418 GCCGACAGATTGCTCGTTGC--CTTAGGCAACAAAAAGGTGTACAATGTTACCAACCCAT 368475 Query 50789 TTCCGTTTATGAATAACATATCGTTGGAGGGCAAAACAAACTTTTTCGA-AAGACGTGTA 50847 | || ||| | ||||| || |||| || || || ||||| ||||| |||| | ||| Sbjct 368476 TCGACTTCATGGAAAACATTTCTTTGGCTGGTAAGACCAACTTCTTCGAGAAGA-GAGTA 368534 Query 50848 GGCGAATAC 50856 ||| ||| Sbjct 368535 TCCGACTAC 368543 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 507013423997280