Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Metschnikowia_20australis_20[genbank_20GCA_5F002073855.1_202017-03-
29] 154 sequences; 14,350,841 total letters
Query= NC_004117.1
Length=158482
Score E
Sequences producing significant alignments: (Bits) Value
seq68 113 5e-20
>seq68
Length=1116518
Score = 113 bits (124), Expect = 5e-20
Identities = 291/429 (68%), Gaps = 21/429 (5%)
Strand=Plus/Plus
Query 50437 GTTGAAGGTGTGtttttttCCGGTAGCTTTGCAGCCATATTTTACATTAAAACCTTAGGC 50496
||||| ||||| ||||| || || ||||| | || || | | || | ||||
Sbjct 368127 GTTGAGGGTGTCTTTTTCTCAGGCTCATTTGCCTCGATCTTCTGGTTAAAGAAGAGAGGC 368186
Query 50497 ATAATGCCCGGCCTCACGTTTAGCAACGAGTTGATTTCGCGCGACGAAGGAATGCACACA 50556
| ||||| |||||||||||| ||||||||||||| || ||||| || |||||||
Sbjct 368187 TTGATGCCTGGCCTCACGTTTTCAAACGAGTTGATTTGCCGTGACGAGGGCTTGCACACT 368246
Query 50557 GACTTTGCGTGTTTGTACTACAATACGCGCGTAAATGAAAAATTATCATACGAAACAATT 50616
|||||||| ||||||| | | ||| | | | |||| | | | ||| ||||
Sbjct 368247 GACTTTGCTTGTTTGTTGTTC---TCGCACTTGA---AAAACAGACCCGCCCAAAAAATT 368300
Query 50617 TTGGACA----TGTTCAAAGAAGCCGTCGACATCGAAAAAGAGTTTTTCACGGACGCTTT 50672
| || | |||| | || || || ||| || || |||| |||||||| | ||
Sbjct 368301 GTCGAGAGAATTGTT-ACCGAGGCTGTTTCCATTGAGAAGGAGTACTTCACGGATTCCTT 368359
Query 50673 ACC-CGTGGCATTGTTGGGCATGAAC-GCAGACATGATGTGCGAGTACATTGAGTTTGTT 50730
|| | || |||||||| |||||| ||| || |||||||| |||| | ||||||||
Sbjct 368360 GCCATCTAGC-TTGTTGGGTATGAACAGCA-ACTTGATGTGCCAGTATGTGGAGTTTGTC 368417
Query 50731 GCAGACAGATTG-TTGTTGCAGCTGGGACAACCGAAA-TACTATAATGCACGTAACCCCT 50788
|| ||||||||| | ||||| || | |||| ||| || |||| ||||| |
Sbjct 368418 GCCGACAGATTGCTCGTTGC--CTTAGGCAACAAAAAGGTGTACAATGTTACCAACCCAT 368475
Query 50789 TTCCGTTTATGAATAACATATCGTTGGAGGGCAAAACAAACTTTTTCGA-AAGACGTGTA 50847
| || ||| | ||||| || |||| || || || ||||| ||||| |||| | |||
Sbjct 368476 TCGACTTCATGGAAAACATTTCTTTGGCTGGTAAGACCAACTTCTTCGAGAAGA-GAGTA 368534
Query 50848 GGCGAATAC 50856
||| |||
Sbjct 368535 TCCGACTAC 368543
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 507013423997280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |