Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Metschnikowia_20australis_20[genbank_20GCA_5F002073855.1_202017-03- 29] 154 sequences; 14,350,841 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq68 203 5e-47 seq73 127 3e-24 >seq68 Length=1116518 Score = 203 bits (224), Expect = 5e-47 Identities = 571/868 (66%), Gaps = 23/868 (3%) Strand=Plus/Plus Query 124996 TGTTTCCCATCAGGTATCATGACATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTT 125055 ||||||| |||| ||| ||||| | ||| | |||||||| || || |||| || || | Sbjct 367678 TGTTTCCTATCAAGTACCATGAAGTCTGGCAGATGTACAAGAAAGCCGAGGCGTCTTTCT 367737 Query 125056 GGACGGTCGAAGAGGTCGATCTGTCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTG 125115 |||| | ||| ||| |||| ||||||||||| | |||| ||| | | |||| | Sbjct 367738 GGACCGCCGAGGAGATCGACTTGTCCAAGGACATCAACGACTGGAACAACAAAATGACCG 367797 Query 125116 AAACTGAGCGAGAGTTTATATCGCACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCG 125175 | | |||| | || || |||| | |||||||||||||| | ||| || ||||||| Sbjct 367798 ACAATGAGAGGTTTTTCATCTCGCGTGTGTTGGCCTTCTTTGCTGCCTCTGACGGAATCG 367857 Query 125176 TCAACGACAATCTGTTGACACGATTCTCTCAAGAGTTGACCATTCCAGAGGTGTCGTGCT 125235 ||||||| || || | | || ||| ||| || || || |||| ||||| Sbjct 367858 TCAACGAAAACTTGGTAGAAAACTTTTCTTCCGAGGTGCAGATCCCTGAGGCAAAGTGCT 367917 Query 125236 TTTACGGATTCCAAATCATGATTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTG 125295 | || |||||||| |||||||| ||||| | || ||||| | ||||| |||||| Sbjct 367918 TCTATGGATTCCAGATCATGATGGAGAATATTCATTCGGAGACCTACTCCTTGTTGATTG 367977 Query 125296 ACATGTACATTCGCGATCCGCAACGTAAAC-ACATGCTCTTTAACGCAATCGACACGGTG 125354 ||| |||| || | || ||| | | | || | | ||||| ||||| |||| | Sbjct 367978 ACACCTACA-TCAAGGACCCCAAGGAATCCGACTTCTTGTTTAATGCAATTGACAACATC 368036 Query 125355 CCGTCTATACGTAAAAAGGCTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCG 125414 || | ||| ||||| || | |||| | |||||||| ||| | || | | | Sbjct 368037 CCATGTATCAAGAAAAAAGCCGATTGGGCCTTGAGGTGGATCAGTGATAAGGAGGCCTTG 368096 Query 125415 TACGCCGACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTT 125474 | | ||| ||| |||| || ||||| ||||| ||||| |||| || || || ||| Sbjct 368097 TTTGGCGAGAGATTGGTTGCCTTCGCTGCCGTTGAGGGTGTCTTTTTCTCAGGCTCATTT 368156 Query 125475 GCGGCCATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAG 125534 || | ||||| ||| | |||||| | || | ||||| || || ||| |||||| Sbjct 368157 GCCTCGATCTTCTGGTTAAAGAAGAGAGGCTTGATGCCTGGCCTCACGTTTTCAAACGAG 368216 Query 125535 TTTATATCTCGAGACGAGGGCCTACACTGTGACTTTGCCATTCTACTGTT-TCGCAACTA 125593 || || | || ||||||||| | ||| ||||||||| | | |||| |||| ||| Sbjct 368217 TTGATTTGCCGTGACGAGGGCTTGCACACTGACTTTGCTTGTTTGTTGTTCTCGC-ACT- 368274 Query 125594 TCTGCGTCCCGAGTGCAGATCCAGCGATGAAAAGGTCATCAACATTGTAACCGATGCCGT 125653 || | |||| || | | ||| ||| | ||||| ||||| || || Sbjct 368275 --TG------AAAAACAGACCCGCCCAAAAAATTGTCGAGAGAATTGTTACCGAGGCTGT 368326 Query 125654 GAGGATAGAACAAGAGTTTCTAACCGAATCCCTACCGGTCAGCATGATTGGCATGAACTG 125713 || || | |||| | || || ||| | || ||| || | || |||||| | Sbjct 368327 TTCCATTGAGAAGGAGTACTTCACGGATTCCTTGCCATCTAGCTTGTTGGGTATGAACAG 368386 Query 125714 CAAGCTAATGTGCGAGTACATAGAGTTTGTGGCAGATCGTCTACTGTACGAGTTG--ATT 125771 ||| | |||||| |||| | |||||||| || || | | || | |||| | Sbjct 368387 CAACTTGATGTGCCAGTATGTGGAGTTTGTCGCCGACAG---ATTG--CTCGTTGCCTTA 368441 Query 125772 GGCCGC---AAGATTTACAACGCCAAGAATCCCTTTGATTTCATGACCAGCATATCACTA 125828 ||| | ||| | ||||| | | || || || || |||||| | ||| || | Sbjct 368442 GGCAACAAAAAGGTGTACAATGTTACCAACCCATTCGACTTCATGGAAAACATTTCTTTG 368501 Query 125829 GAGGGTAAGACCAACTTTTTCGAGAAGA 125856 | |||||||||||||| |||||||||| Sbjct 368502 GCTGGTAAGACCAACTTCTTCGAGAAGA 368529 >seq73 Length=169253 Score = 127 bits (140), Expect = 3e-24 Identities = 317/476 (67%), Gaps = 8/476 (2%) Strand=Plus/Plus Query 96862 CACGATACGTTACACAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAAC 96921 |||| || ||| ||||| || || || | || || || | ||| |||| ||||| | Sbjct 116434 CACGTTATGTTGACCAGGGAGGTAACAAGAGACCTGGTGCCTTTGCCCTCTATTTGGAGC 116493 Query 96922 CTTGGCACGCGGACGTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGG 96981 | |||||||||||| | ||||| |||||||| || | || ||| ||| ||||| Sbjct 116494 CATGGCACGCGGACATCTTTGATTTTATCGACATCAGAAAGAACCACGGCAAAGAAGAAA 116553 Query 96982 CACGAGCCAGGGACTTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCA 97041 ||||||| |||||||| ||| || ||| | || || |||||||||||| | ||| Sbjct 116554 ACAGAGCCAGAGACTTGTTCCCTGCGCTTTGGATCCCGGACTTGTTCATGAAGAGAGTCG 116613 Query 97042 ACGACGGTGGCTACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCT 97101 | | | ||| |||||| | | | | || || | | | ||| || | || |||| Sbjct 116614 AACAAGATGGTGACTGGACCTTGTTCTCTCCAAACGAGGCCCGTGGTTTGCCTGAGTGCT 116673 Query 97102 GGGGCGAAGAGTTTGAGGCCAAGTACACGGCCTACGAGCAAGAGGGCCGATACGTGAGA- 97160 || || ||||| |||||| ||| | |||||| ||||||||| || ||| Sbjct 116674 ACGGTGACGAGTTCGAGGCCTTATACGAGAAATACGAGAGAGAGGGCCG---CGGCAGAT 116730 Query 97161 CGA--GTCGATGCACGAGAACTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAA 97218 | | || | |||| | | || ||| | |||||| || || ||| || || || | Sbjct 116731 CTACCGTGAAGGCACAAAAGCTCTGGTACGCCATCTTGGAAGCGCAGACCGAAACCGGCA 116790 Query 97219 CTCCGTACATTCTCTACAAGGATACCGTGAATCG-CAACAGCAACCAACGCCACTTGGGC 97277 |||| | || | |||||||| |||| | || || | ||||||| ||||||| Sbjct 116791 CTCCATTTATGTTGTACAAGGA-CGCGTGCAACGAAAAGACCAACCAAAAGAACTTGGGT 116849 Query 97278 ACCATCAAGGGCTCCAATCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGA 97333 | |||||| ||||| |||| || || || |||||| | || || ||||| Sbjct 116850 ATGATCAAGTCTTCCAACTTGTGTTGCGAGATCGTTGAGTACTCGTCGCCCGACGA 116905 Score = 102 bits (112), Expect = 1e-16 Identities = 299/461 (65%), Gaps = 0/461 (0%) Strand=Plus/Plus Query 97774 ACGGTTTGAGAAACTCTTTGCTGGTGGCACCGATGCCCACGGCTACCACTTCCCAAGTGT 97833 |||| | |||||||| ||||| |||||||| ||||| || ||| |||| || || | | Sbjct 117367 ACGGGCTCAGAAACTCGTTGCTCGTGGCACCAATGCCAACTGCTTCCACGTCGCAGATCT 117426 Query 97834 TTGGCAATGCTGAATCTTTTGAACCGTTCACGTCAAACATGTACCAGAGACGCACCCAGT 97893 | || || || | ||| || || | ||| || || || ||| ||| | | Sbjct 117427 TGGGAAACAACGAGTGTTTCGAGCCCTACACCTCCAATATCTACTCCAGAAGAGTGCTTG 117486 Query 97894 CTGGAGAGTTTCAATTGACCAACGTGCACTTGGTTCGAGACTTGGAACGGCTCAATCTGT 97953 | || ||||||||| | |||| |||| || | ||||||| | ||| | Sbjct 117487 CAGGTGAGTTTCAAATTGTCAACTCGCACATGTTGAAGGACTTGGTTGACTTGGGTCTCT 117546 Query 97954 GGAACGATGACATGGCCCAGTTGATCATGTACAACAATGGGTCCATTCAAAACATTACCA 98013 ||||||| |||| | ||||| | ||||| || || || || | | ||| Sbjct 117547 GGAACGACTCCATGAAGAACAACATCATTTCTAACAACGGTTCGATCCAGTCCTTGCCCA 117606 Query 98014 TCATCCCGGAAGAGTTGCGCAGAATCTACAAGACTGTCTGGGAGATTCCGACCAAGACGC 98073 |||||| || || | | |||||||| || ||||| || || ||| Sbjct 117607 ACATCCCTGACGACATCAAGGCCTTGTACAAGACAGTGTGGGAAATCTCGCAGAAGCACA 117666 Query 98074 TGATCGATATGGCTGCCGACAGAGGTGTCTACATTGACCAGAGTCAATCGTTCAATCTGT 98133 | ||||| |||||||||||||||| | || ||||||||| || || || || | Sbjct 117667 TTATCGACATGGCTGCCGACAGAGCGGCCTTCATTGACCAATCCCAGTCCTTGAACATCC 117726 Query 98134 ACGTTGCCGAGCCCACCTACAGTCGTATGACTTCGATACACTTTTACGCATGGAACAAGG 98193 || | || |||||| || |||| || || |||||||||| ||||| |||| Sbjct 117727 ACATCAAAGACCCCACCATGGGTAAGTTGACCTCCATGCACTTTTACGGCTGGAAAAAGG 117786 Query 98194 GCCTCAAGACGGGCATGTACTATCTGAGAACAAAGTCGGCC 98234 | | ||||| || |||||||| |||||||| || | ||| Sbjct 117787 GATTGAAGACTGGTATGTACTACTTGAGAACACAGGCTGCC 117827 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741057773461040