Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Metschnikowia_20australis_20[genbank_20GCA_5F002073855.1_202017-03-
29] 154 sequences; 14,350,841 total letters
Query= NC_005038.1
Length=99657
Score E
Sequences producing significant alignments: (Bits) Value
seq96 100 2e-16
seq91 87.8 1e-12
seq79 82.4 5e-11
>seq96
Length=44914
Score = 100 bits (110), Expect = 2e-16
Identities = 163/233 (70%), Gaps = 4/233 (2%)
Strand=Plus/Plus
Query 33142 ACCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGA 33201
||| |||||||| | | ||||||||||||||| ||||| || || || ||||| || ||
Sbjct 32 ACCACCTCTTAATCTGAGCACCAAATGCAATGTGGACTCCTTCTGGATGTTGTAGTCGGA 91
Query 33202 CAAATTGAGTTG--GTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTG 33259
||| || || ||| ||||||||||| || || || || | ||| ||||| |
Sbjct 92 CAA--TGTTCTGCCGTCCTCCAATTGCTTACCGGCGAAGATCAATCTTTGTTGGTCTGGT 149
Query 33260 GGTATGCCTTCTTTTTCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGA 33319
|| ||||| || || || |||| ||| || | | ||| ||||| || |
Sbjct 150 GGAATGCCCTCCTTATCTTGAATCTTGGCTTTGACATTATCAATGGTGTCCGAGGCCTCG 209
Query 33320 ACGTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCATGTT 33372
|| || || || || || ||||| || || ||||| ||||| |||||||| ||
Sbjct 210 ACCTCGAGTGTGATTGTCTTTCCGGTTAGTGTTTTGACGAAGATTTGCATTTT 262
>seq91
Length=77570
Score = 87.8 bits (96), Expect = 1e-12
Identities = 158/229 (69%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 33143 CCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGAC 33202
|||||||| || | | ||||||||||||||| ||||| || || || ||||| ||||||
Sbjct 640 CCGCCTCTCAATCTGAGCACCAAATGCAATGTGGACTCCTTCTGGATGTTGTAGTCAGAC 581
Query 33203 AAATTGAGTTG--GTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGG 33260
|| || || ||| ||||||||||| || || || || | ||| ||||| | |
Sbjct 580 AA--TGTTCTGCCGTCCTCCAATTGCTTACCGGCGAAAATCAATCTTTGTTGGTCTGGTG 523
Query 33261 GTATGCCTTCTTTTTCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAA 33320
| ||||| || || || |||| ||| || | | ||| ||||| || | |
Sbjct 522 GAATGCCCTCCTTATCTTGAATCTTGGCTTTGACATTATCAATGGTGTCAGAGGCCTCGA 463
Query 33321 CGTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369
| || || || || || ||||| || | || || || || ||||||||
Sbjct 462 CCTCGAGTGTGATTGTCTTTCCGGTCAAGGTCTTGACAAAGATTTGCAT 414
>seq79
Length=900310
Score = 82.4 bits (90), Expect = 5e-11
Identities = 158/232 (68%), Gaps = 6/232 (3%)
Strand=Plus/Minus
Query 33141 CACCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAG 33200
|||| ||||| || | | ||||||||||| || ||||| || || || ||||| ||||
Sbjct 649557 CACCACCTCTCAATCTGAGGACCAAATGCAACGTGGACTCCTTCTGGATGTTGTAGTCAG 649498
Query 33201 ACAAATTGAGTTGGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGG 33260
|||| | ||| ||||| ||||| ||| || || || | ||||||||| | |
Sbjct 649497 ACAAGGTTCTGCCGTCCTCCAACTGCTTACCAGCGAAGATCAATCTTTGCTGGTCAGGTG 649438
Query 33261 GTATGCCTTCTTT---TTCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTT 33317
| || ||||| || || | | | ||| || || | | || |||||| || |
Sbjct 649437 GAATTCCTTCCTTGTCTTGGATCTTGGCC---TTGACATTGTCGATGGTGTCGGAGGCCT 649381
Query 33318 GAACGTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369
|| |||| ||| || || || ||||| | || || ||||| ||||||||
Sbjct 649380 CGACCTCCAAAGTGATGGTCTTACCCGTTAAGGTCTTGACGAAGATTTGCAT 649329
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 318777001694292
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |