Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Metschnikowia_20australis_20[genbank_20GCA_5F002073855.1_202017-03- 29] 154 sequences; 14,350,841 total letters Query= NC_005179.1 Length=134721 Score E Sequences producing significant alignments: (Bits) Value seq68 161 9e-35 >seq68 Length=1116518 Score = 161 bits (178), Expect = 9e-35 Identities = 472/714 (66%), Gaps = 20/714 (3%) Strand=Plus/Minus Query 12875 ACTCTTTTTTCAAAAAAGTTTGTTTTTCCTTCTAACGAAATATTTTCCATAAAATCGAAA 12934 ||||| || || || ||||| || || || | || ||||| |||||||| || ||||| Sbjct 368533 ACTCTCTTCTCGAAGAAGTTGGTCTTACCAGCCAAAGAAATGTTTTCCATGAAGTCGAAT 368474 Query 12935 GGATTTTTCGAACAATAGTAT---TTTTTACACCCTAATTCTAGTAACAATCTGTCAGCA 12991 || || | |||| | ||| ||||| ||||| | | | ||||||||| || Sbjct 368473 GGGTTGGT--AACATT-GTACACCTTTTTGTTGCCTAAGGCAACGAGCAATCTGTCGGCG 368417 Query 12992 ACAAACTCTATGTACTGTTTCATTAAATCACAGTTCATTCCTATTAATTTTACAGGCATA 13051 |||||||| | ||||| ||| || | | |||||| || | || | |||| Sbjct 368416 ACAAACTCCACATACTGGCACATCAAGTTGCTGTTCATACCCAACAAGCTAGATGGCAAG 368357 Query 13052 GCTTCTGTTAAAAAGtttttttCTATATCAACTGCTTCGATAACTATGTCTCTTATTACG 13111 | || || || | | || || || ||| || ||| |||| || ||||| | Sbjct 368356 GAATCCGTGAAGTACTCCTTCTCAATGGAAACAGCCTCGGTAACAAT-TCTCTCGACAAT 368298 Query 13112 TTCTCTAATGGAGGATTTGAT----AGATGCTTAAACATCATACATGCAAAATCACAGTG 13167 || | || || | || | | ||| |||| || ||| ||||| ||| ||| Sbjct 368297 TTTTTG---GGCGGGTCTGTTTTTCAAGTGCGAGAACAACAAACAAGCAAAGTCAGTGTG 368241 Query 13168 CAATCCTTCATCTCTACTTATTAGCTCGTTTGAAAATGTTAGACCCGGCAT-AAGCC-CT 13225 ||| || || || | | || | |||||||||||| || || || ||||| ||||| || Sbjct 368240 CAAGCCCTCGTCACGGCAAATCAACTCGTTTGAAAACGTGAGGCCAGGCATCAAGCCTCT 368181 Query 13226 CGTTTTTTAATCCAAAATATAGCAGCAAACGAACCCGaaaaaaaTATTCCTTCAACTGCT 13285 | || ||||| ||| || || | ||||| || || || ||||| | || ||||| || Sbjct 368180 C-TTCTTTAA-CCAGAAGATCGAGGCAAATGAGCCTGAGAAAAAGACACCCTCAACGGCA 368123 Query 13286 GCAAACGCTATCAACCTTTCACCATACGTACTATTTTTACTCTCT-ATCCACTTTCTGGC 13344 || || || | ||| || || ||| || | ||| || || |||||| | ||| Sbjct 368122 GCGAAGGCAACCAATCTCTCGCCAAACAAGGCCTCCTTA-TCACTGATCCACCTCAAGGC 368064 Query 13345 CCAGTTTGCTTTTTGTTTAACGCAGTTCATATTTTCTATTGCGTTAAATAAATAAttttt 13404 ||| | ||||||| || | || || || || ||||| ||||| || | | Sbjct 368063 CCAATCGGCTTTTTTCTTGATACATGGGATGTTGTCAATTGCATTAAACAAGAAGTCGGA 368004 Query 13405 ttCCTTACTGTCTAAAATATAAGTATCTATCAATAAGCTATACATTTCTGAATGAATATT 13464 |||||| ||| || || || || ||||| ||| || | || ||||||||||| Sbjct 368003 TTCCTTGGGGTCCTTGATGTAGGTGTCAATCAACAAGGAGTAGGTCTCCGAATGAATATT 367944 Query 13465 TTCCATCGCTATTTGGAAACCATAAAAACATCTAGCCTCTGATACCTGAACTTCGGAGTA 13524 |||||| || ||||| ||||| || || | ||||| | | ||| || ||||| | Sbjct 367943 CTCCATCATGATCTGGAATCCATAGAAGCACTTTGCCTCAGGGATCTGCACCTCGGAAGA 367884 Query 13525 AAATCTTTCTGCTAAGTTTTCGTTAACTATCCCGTCACTAGCAGCaaaaaaaGC 13578 ||| ||||| | ||||||||||| || || |||||| |||||||| || || Sbjct 367883 AAAGTTTTCTACCAAGTTTTCGTTGACGATTCCGTCAGAGGCAGCAAAGAAGGC 367830 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430981591099908