Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Metschnikowia_20australis_20[genbank_20GCA_5F002073855.1_202017-03-
29] 154 sequences; 14,350,841 total letters
Query= NC_005179.1
Length=134721
Score E
Sequences producing significant alignments: (Bits) Value
seq68 161 9e-35
>seq68
Length=1116518
Score = 161 bits (178), Expect = 9e-35
Identities = 472/714 (66%), Gaps = 20/714 (3%)
Strand=Plus/Minus
Query 12875 ACTCTTTTTTCAAAAAAGTTTGTTTTTCCTTCTAACGAAATATTTTCCATAAAATCGAAA 12934
||||| || || || ||||| || || || | || ||||| |||||||| || |||||
Sbjct 368533 ACTCTCTTCTCGAAGAAGTTGGTCTTACCAGCCAAAGAAATGTTTTCCATGAAGTCGAAT 368474
Query 12935 GGATTTTTCGAACAATAGTAT---TTTTTACACCCTAATTCTAGTAACAATCTGTCAGCA 12991
|| || | |||| | ||| ||||| ||||| | | | ||||||||| ||
Sbjct 368473 GGGTTGGT--AACATT-GTACACCTTTTTGTTGCCTAAGGCAACGAGCAATCTGTCGGCG 368417
Query 12992 ACAAACTCTATGTACTGTTTCATTAAATCACAGTTCATTCCTATTAATTTTACAGGCATA 13051
|||||||| | ||||| ||| || | | |||||| || | || | ||||
Sbjct 368416 ACAAACTCCACATACTGGCACATCAAGTTGCTGTTCATACCCAACAAGCTAGATGGCAAG 368357
Query 13052 GCTTCTGTTAAAAAGtttttttCTATATCAACTGCTTCGATAACTATGTCTCTTATTACG 13111
| || || || | | || || || ||| || ||| |||| || ||||| |
Sbjct 368356 GAATCCGTGAAGTACTCCTTCTCAATGGAAACAGCCTCGGTAACAAT-TCTCTCGACAAT 368298
Query 13112 TTCTCTAATGGAGGATTTGAT----AGATGCTTAAACATCATACATGCAAAATCACAGTG 13167
|| | || || | || | | ||| |||| || ||| ||||| ||| |||
Sbjct 368297 TTTTTG---GGCGGGTCTGTTTTTCAAGTGCGAGAACAACAAACAAGCAAAGTCAGTGTG 368241
Query 13168 CAATCCTTCATCTCTACTTATTAGCTCGTTTGAAAATGTTAGACCCGGCAT-AAGCC-CT 13225
||| || || || | | || | |||||||||||| || || || ||||| ||||| ||
Sbjct 368240 CAAGCCCTCGTCACGGCAAATCAACTCGTTTGAAAACGTGAGGCCAGGCATCAAGCCTCT 368181
Query 13226 CGTTTTTTAATCCAAAATATAGCAGCAAACGAACCCGaaaaaaaTATTCCTTCAACTGCT 13285
| || ||||| ||| || || | ||||| || || || ||||| | || ||||| ||
Sbjct 368180 C-TTCTTTAA-CCAGAAGATCGAGGCAAATGAGCCTGAGAAAAAGACACCCTCAACGGCA 368123
Query 13286 GCAAACGCTATCAACCTTTCACCATACGTACTATTTTTACTCTCT-ATCCACTTTCTGGC 13344
|| || || | ||| || || ||| || | ||| || || |||||| | |||
Sbjct 368122 GCGAAGGCAACCAATCTCTCGCCAAACAAGGCCTCCTTA-TCACTGATCCACCTCAAGGC 368064
Query 13345 CCAGTTTGCTTTTTGTTTAACGCAGTTCATATTTTCTATTGCGTTAAATAAATAAttttt 13404
||| | ||||||| || | || || || || ||||| ||||| || | |
Sbjct 368063 CCAATCGGCTTTTTTCTTGATACATGGGATGTTGTCAATTGCATTAAACAAGAAGTCGGA 368004
Query 13405 ttCCTTACTGTCTAAAATATAAGTATCTATCAATAAGCTATACATTTCTGAATGAATATT 13464
|||||| ||| || || || || ||||| ||| || | || |||||||||||
Sbjct 368003 TTCCTTGGGGTCCTTGATGTAGGTGTCAATCAACAAGGAGTAGGTCTCCGAATGAATATT 367944
Query 13465 TTCCATCGCTATTTGGAAACCATAAAAACATCTAGCCTCTGATACCTGAACTTCGGAGTA 13524
|||||| || ||||| ||||| || || | ||||| | | ||| || ||||| |
Sbjct 367943 CTCCATCATGATCTGGAATCCATAGAAGCACTTTGCCTCAGGGATCTGCACCTCGGAAGA 367884
Query 13525 AAATCTTTCTGCTAAGTTTTCGTTAACTATCCCGTCACTAGCAGCaaaaaaaGC 13578
||| ||||| | ||||||||||| || || |||||| |||||||| || ||
Sbjct 367883 AAAGTTTTCTACCAAGTTTTCGTTGACGATTCCGTCAGAGGCAGCAAAGAAGGC 367830
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 430981591099908
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |