Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Metschnikowia_20australis_20[genbank_20GCA_5F002073855.1_202017-03-
29] 154 sequences; 14,350,841 total letters
Query= NC_008035.3
Length=126629
Score E
Sequences producing significant alignments: (Bits) Value
seq96 109 4e-19
seq91 93.3 3e-14
seq79 84.2 2e-11
>seq96
Length=44914
Score = 109 bits (120), Expect = 4e-19
Identities = 167/236 (71%), Gaps = 4/236 (2%)
Strand=Plus/Plus
Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768
|| |||| || || || |||| ||||| ||||||||||| || ||||||||||||| |
Sbjct 33 CCACCTCTTAATCTGAGCACCAAATGCAATGTGGACTCCTTCTGGATGTTGTAGTCGGAC 92
Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828
| ||| || ||||||||||||| || || || | || | | |||||||| ||
Sbjct 93 AATGTTCTGCCGTCCTCCAATTGCTTACCGGCGAAGATCAATCTTTGTTGGTCTGGTGGA 152
Query 16829 ACGCCCTCTTTGTCGGCAA--TTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886
| |||||| || || || || ||| || || | | | ||||| || |||
Sbjct 153 ATGCCCTCCTTATCTTGAATCTTGGCT--TTGACATTATCAATGGTGTCCGAGGCCTCGA 210
Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATTTTGTAG 16942
|| | ||||| || |||||||| || |||||||| || || ||||||||||||
Sbjct 211 CCTCGAGTGTGATTGTCTTTCCGGTTAGTGTTTTGACGAAGATTTGCATTTTGTAG 266
>seq91
Length=77570
Score = 93.3 bits (102), Expect = 3e-14
Identities = 152/217 (70%), Gaps = 4/217 (2%)
Strand=Plus/Minus
Query 16721 CTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCG 16780
|| || |||| ||||| ||||||||||| || ||||||||||||| || ||| || ||
Sbjct 400 CTGAGCACCAAATGCAATGTGGACTCCTTCTGGATGTTGTAGTCGGACAATGTTCTGCCG 341
Query 16781 TCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTG 16840
||||||||||| || || || | || | | |||||||| || | |||||| ||
Sbjct 340 TCCTCCAATTGCTTACCGGCGAAGATCAATCTTTGTTGGTCTGGTGGAATGCCCTCCTTA 281
Query 16841 TCGGCAA--TTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGA 16898
|| || || ||| || || | | | ||||| || ||| || | ||||
Sbjct 280 TCTTGAATCTTGGCT--TTGACATTATCAATGGTGTCCGAGGCCTCGACCTCGAGTGTGA 223
Query 16899 TGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935
| || |||||||||| || |||||||| || |||||
Sbjct 222 TTGTCTTTCCGGTCAAGGTCTTGACAAAGATTTGCAT 186
Score = 93.3 bits (102), Expect = 3e-14
Identities = 152/217 (70%), Gaps = 4/217 (2%)
Strand=Plus/Minus
Query 16721 CTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCG 16780
|| || |||| ||||| ||||||||||| || ||||||||||| | || ||| || ||
Sbjct 628 CTGAGCACCAAATGCAATGTGGACTCCTTCTGGATGTTGTAGTCAGACAATGTTCTGCCG 569
Query 16781 TCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTG 16840
||||||||||| || || || |||| | | |||||||| || | |||||| ||
Sbjct 568 TCCTCCAATTGCTTACCGGCGAAAATCAATCTTTGTTGGTCTGGTGGAATGCCCTCCTTA 509
Query 16841 TCGGCAA--TTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGA 16898
|| || || ||| || || | | | ||||| || ||| || | ||||
Sbjct 508 TCTTGAATCTTGGCT--TTGACATTATCAATGGTGTCAGAGGCCTCGACCTCGAGTGTGA 451
Query 16899 TGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935
| || |||||||||| || |||||||| || |||||
Sbjct 450 TTGTCTTTCCGGTCAAGGTCTTGACAAAGATTTGCAT 414
Score = 89.7 bits (98), Expect = 4e-13
Identities = 100/134 (75%), Gaps = 0/134 (0%)
Strand=Plus/Minus
Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768
|| |||| || || || |||| ||||| ||||||||||| || ||||||||||||| |
Sbjct 184 CCACCTCTTAATCTGAGCACCAAATGCAATGTGGACTCCTTCTGGATGTTGTAGTCGGAC 125
Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828
| ||| || ||||||||||||| || || || |||| | | |||||||| ||
Sbjct 124 AATGTTCTGCCGTCCTCCAATTGCTTACCGGCGAAAATCAATCTTTGTTGGTCTGGTGGA 65
Query 16829 ACGCCCTCTTTGTC 16842
| |||||| || ||
Sbjct 64 ATGCCCTCCTTATC 51
>seq79
Length=900310
Score = 84.2 bits (92), Expect = 2e-11
Identities = 150/217 (69%), Gaps = 4/217 (2%)
Strand=Plus/Minus
Query 16721 CTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCG 16780
|| || |||| ||||| |||||||||||| || ||||||||||| | || |||| || ||
Sbjct 649543 CTGAGGACCAAATGCAACGTGGACTCCTTCTGGATGTTGTAGTCAGACAAGGTTCTGCCG 649484
Query 16781 TCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTG 16840
|||||||| || || || || | || | | || ||||| || | || || |||
Sbjct 649483 TCCTCCAACTGCTTACCAGCGAAGATCAATCTTTGCTGGTCAGGTGGAATTCCTTCCTTG 649424
Query 16841 TC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGA 16898
|| || || || ||| || | | | | |||||| || ||| |||| ||||
Sbjct 649423 TCTTGGATCTTGGC--CTTGACATTGTCGATGGTGTCGGAGGCCTCGACCTCCAAAGTGA 649366
Query 16899 TGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935
|||| || || || | || ||||| || || |||||
Sbjct 649365 TGGTCTTACCCGTTAAGGTCTTGACGAAGATTTGCAT 649329
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 405087239700460
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |