Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Metschnikowia_20australis_20[genbank_20GCA_5F002073855.1_202017-03- 29] 154 sequences; 14,350,841 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq96 109 4e-19 seq91 93.3 3e-14 seq79 84.2 2e-11 >seq96 Length=44914 Score = 109 bits (120), Expect = 4e-19 Identities = 167/236 (71%), Gaps = 4/236 (2%) Strand=Plus/Plus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || |||| || || || |||| ||||| ||||||||||| || ||||||||||||| | Sbjct 33 CCACCTCTTAATCTGAGCACCAAATGCAATGTGGACTCCTTCTGGATGTTGTAGTCGGAC 92 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | ||| || ||||||||||||| || || || | || | | |||||||| || Sbjct 93 AATGTTCTGCCGTCCTCCAATTGCTTACCGGCGAAGATCAATCTTTGTTGGTCTGGTGGA 152 Query 16829 ACGCCCTCTTTGTCGGCAA--TTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | |||||| || || || || ||| || || | | | ||||| || ||| Sbjct 153 ATGCCCTCCTTATCTTGAATCTTGGCT--TTGACATTATCAATGGTGTCCGAGGCCTCGA 210 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATTTTGTAG 16942 || | ||||| || |||||||| || |||||||| || || |||||||||||| Sbjct 211 CCTCGAGTGTGATTGTCTTTCCGGTTAGTGTTTTGACGAAGATTTGCATTTTGTAG 266 >seq91 Length=77570 Score = 93.3 bits (102), Expect = 3e-14 Identities = 152/217 (70%), Gaps = 4/217 (2%) Strand=Plus/Minus Query 16721 CTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCG 16780 || || |||| ||||| ||||||||||| || ||||||||||||| || ||| || || Sbjct 400 CTGAGCACCAAATGCAATGTGGACTCCTTCTGGATGTTGTAGTCGGACAATGTTCTGCCG 341 Query 16781 TCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTG 16840 ||||||||||| || || || | || | | |||||||| || | |||||| || Sbjct 340 TCCTCCAATTGCTTACCGGCGAAGATCAATCTTTGTTGGTCTGGTGGAATGCCCTCCTTA 281 Query 16841 TCGGCAA--TTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGA 16898 || || || ||| || || | | | ||||| || ||| || | |||| Sbjct 280 TCTTGAATCTTGGCT--TTGACATTATCAATGGTGTCCGAGGCCTCGACCTCGAGTGTGA 223 Query 16899 TGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 | || |||||||||| || |||||||| || ||||| Sbjct 222 TTGTCTTTCCGGTCAAGGTCTTGACAAAGATTTGCAT 186 Score = 93.3 bits (102), Expect = 3e-14 Identities = 152/217 (70%), Gaps = 4/217 (2%) Strand=Plus/Minus Query 16721 CTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCG 16780 || || |||| ||||| ||||||||||| || ||||||||||| | || ||| || || Sbjct 628 CTGAGCACCAAATGCAATGTGGACTCCTTCTGGATGTTGTAGTCAGACAATGTTCTGCCG 569 Query 16781 TCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTG 16840 ||||||||||| || || || |||| | | |||||||| || | |||||| || Sbjct 568 TCCTCCAATTGCTTACCGGCGAAAATCAATCTTTGTTGGTCTGGTGGAATGCCCTCCTTA 509 Query 16841 TCGGCAA--TTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGA 16898 || || || ||| || || | | | ||||| || ||| || | |||| Sbjct 508 TCTTGAATCTTGGCT--TTGACATTATCAATGGTGTCAGAGGCCTCGACCTCGAGTGTGA 451 Query 16899 TGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 | || |||||||||| || |||||||| || ||||| Sbjct 450 TTGTCTTTCCGGTCAAGGTCTTGACAAAGATTTGCAT 414 Score = 89.7 bits (98), Expect = 4e-13 Identities = 100/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || |||| || || || |||| ||||| ||||||||||| || ||||||||||||| | Sbjct 184 CCACCTCTTAATCTGAGCACCAAATGCAATGTGGACTCCTTCTGGATGTTGTAGTCGGAC 125 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | ||| || ||||||||||||| || || || |||| | | |||||||| || Sbjct 124 AATGTTCTGCCGTCCTCCAATTGCTTACCGGCGAAAATCAATCTTTGTTGGTCTGGTGGA 65 Query 16829 ACGCCCTCTTTGTC 16842 | |||||| || || Sbjct 64 ATGCCCTCCTTATC 51 >seq79 Length=900310 Score = 84.2 bits (92), Expect = 2e-11 Identities = 150/217 (69%), Gaps = 4/217 (2%) Strand=Plus/Minus Query 16721 CTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCG 16780 || || |||| ||||| |||||||||||| || ||||||||||| | || |||| || || Sbjct 649543 CTGAGGACCAAATGCAACGTGGACTCCTTCTGGATGTTGTAGTCAGACAAGGTTCTGCCG 649484 Query 16781 TCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTG 16840 |||||||| || || || || | || | | || ||||| || | || || ||| Sbjct 649483 TCCTCCAACTGCTTACCAGCGAAGATCAATCTTTGCTGGTCAGGTGGAATTCCTTCCTTG 649424 Query 16841 TC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGA 16898 || || || || ||| || | | | | |||||| || ||| |||| |||| Sbjct 649423 TCTTGGATCTTGGC--CTTGACATTGTCGATGGTGTCGGAGGCCTCGACCTCCAAAGTGA 649366 Query 16899 TGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 |||| || || || | || ||||| || || ||||| Sbjct 649365 TGGTCTTACCCGTTAAGGTCTTGACGAAGATTTGCAT 649329 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 405087239700460