Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Metschnikowia_20australis_20[genbank_20GCA_5F002073855.1_202017-03- 29] 154 sequences; 14,350,841 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq68 201 1e-46 >seq68 Length=1116518 Score = 201 bits (222), Expect = 1e-46 Identities = 564/859 (66%), Gaps = 10/859 (1%) Strand=Plus/Minus Query 32391 TTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATTTTCCATGAAATCGAATGGATTG 32450 || ||||| || || || ||||| | || || || ||||||||||| |||||||| ||| Sbjct 368527 TTCTCGAAGAAGTTGGTCTTACCAGCCAAAGAAATGTTTTCCATGAAGTCGAATGGGTTG 368468 Query 32451 GTAACATTATAAAtttttttAAATCCCAATTCAGAAATCAATCTATCTGCGACAAATTCT 32510 |||||||| || | ||||| || || || | |||||| || |||||||| || Sbjct 368467 GTAACATTGTACACCTTTTTGTTGCCTAAGGCAACGAGCAATCTGTCGGCGACAAACTCC 368408 Query 32511 ATATATGTTTTCATCATTTCACAATTCATTCCTATAAGTTTAACTGGAAGAGCCACAGT- 32569 | ||| ||||| | | ||||| || | | || ||| | | | || Sbjct 368407 ACATACTGGCACATCAAGTTGCTGTTCATACCCAACAAGCTAGATGGCAAGGAATCCGTG 368348 Query 32570 AAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAATAGATCTT-ACTGTTTCTTCAC 32628 ||| | | ||| | |||| || || || || || | ||| ||| || ||| || Sbjct 368347 AAGTACTCCTTCT-CAATGGAAACAGCCTCGGTAACAATTC-TCTCGACAATTTTTTGGG 368290 Query 32629 TCGGTGGATACAATAAATGTTTAAACATCAAACATGCGAAATCGCAGTGTAGACCCTCGT 32688 ||| | || || |||| |||||| || || || ||| | ||||||| Sbjct 368289 CGGGTCTGTTTTTCAAGTGCGAGAACAACAAACAAGCAAAGTCAGTGTGCAAGCCCTCGT 368230 Query 32689 CTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCC 32748 | | | ||| || ||||| ||||||||||| || ||||| | ||| | ||| || | || Sbjct 368229 CACGGCAAATCAACTCGTTTGAAAACGTGAGGCCAGGCATCAAGCCTCTCTTCTTTAACC 368170 Query 32749 AAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAA 32808 | || || || |||||||| || || || || | || || || || || ||||||| | Sbjct 368169 AGAAGATCGAGGCAAATGAGCCTGAGAAAAAGACACCCTCAACGGCAGCGAAGGCAACCA 368110 Query 32809 GTCTCTCTCCATAACCGG---CGCTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCT 32865 |||||| ||| | || | | ||| |||||| | ||||||||||| || | Sbjct 368109 ATCTCTCGCCAAACAAGGCCTCCTTATCACTGATCCACCTCAAGGCCCAATCGGCTTTTT 368050 Query 32866 TTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAGATAGtttttttCATTACTATCTT 32925 | || | ||| || || | || || |||||||| | ||| ||| || || | Sbjct 368049 TCTTGATACATGGGATGTTGTCAATTGCATTAAACAAGAAGTCGGATTCCTTGGGGTCCT 367990 Query 32926 TAACATATGTATCAATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATTT 32985 | | || || |||||||| | || | ||||||||||| || || || || | Sbjct 367989 TGATGTAGGTGTCAATCAACAAGGAGTAGGTCTCCGAATGAATATTCTCCATCATGATCT 367930 Query 32986 GAAATCCGTAGAAGCATCTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTCTGCTA 33045 | ||||| |||||||| | ||||| | ||||| || || | | |||| |||| | | Sbjct 367929 GGAATCCATAGAAGCACTTTGCCTCAGGGATCTGCACCTCGGAAGAAAAGTTTTCTACCA 367870 Query 33046 AATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAAT 33105 | ||||| || || ||||||||| ||| ||||| || ||||| ||| | || ||| Sbjct 367869 AGTTTTCGTTGACGATTCCGTCAGAGGCAGCAAAGAAGGCCAACACACGCGAGATGAAAA 367810 Query 33106 ATTTTTC---GTCTGGTGTTAGTTTATTCCAATCATTGATATCTTTAGATATATCCACTT 33162 | | || ||| | || || ||||| || ||||| || || || | || | | Sbjct 367809 ACCTCTCATTGTCGGTCATTTTGTTGTTCCAGTCGTTGATGTCCTTGGACAAGTCGATCT 367750 Query 33163 CTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATT 33222 | || | ||||| || || ||||| || || || ||||| | ||||| ||||| || | Sbjct 367749 CCTCGGCGGTCCAGAAAGACGCCTCGGCTTTCTTGTACATCTGCCAGACTTCATGGTACT 367690 Query 33223 GAATTGGAAAAATAACAAA 33241 || ||||| | ||||| Sbjct 367689 TGATAGGAAACAACACAAA 367671 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633630780258400