Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Metschnikowia_20australis_20[genbank_20GCA_5F002073855.1_202017-03- 29] 154 sequences; 14,350,841 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq79 114 1e-20 >seq79 Length=900310 Score = 114 bits (126), Expect = 1e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| || || || || ||||| ||||| || ||||| | || || || || || Sbjct 649329 ATGCAAATCTTCGTCAAGACCTTAACGGGTAAGACCATCACTTTGGAGGTCGAGGCCTCC 649388 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | ||| || |||| || || ||||||||||| || |||||||| || || Sbjct 649389 GACACCATCGACAATGTCAAGGCCAAGATCCAAGACAAGGAAGGAATTCCACCTGACCAG 649448 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 ||| | | || || || || || ||||| ||||| | | ||| | || || |||||| Sbjct 649449 CAAAGATTGATCTTCGCTGGTAAGCAGTTGGAGGACGGCAGAACCTTGTCTGACTACAAC 649508 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 || || || || ||||| | ||||| || | ||||| | || ||| Sbjct 649509 ATCCAGAAGGAGTCCACGTTGCATTTGGTCCTCAGATTGAGAGGTGGT 649556 Score = 91.5 bits (100), Expect = 1e-13 Identities = 119/160 (74%), Gaps = 6/160 (4%) Strand=Plus/Minus Query 129704 CCAAATTGCAGACGGCACTTTCGTTTTTGTCACTGTACTCGACAATTTCGGCGCACAAAT 129763 |||| |||||||| ||| |||| || || ||| || ||||| ||| ||||| | Sbjct 896874 CCAAGTTGCAGACCGCAGTTTCATTGCTGGATGAGTATTCCACAATCTCGCAACACAAGT 896815 Query 129764 T--ACTATTTTTAATGGTGCCCAAATGCTTTTGATT-ACTTTTCATGTTGCAAGCATCTT 129820 | || |||| ||||| ||||||| ||||| || | |||| ||||||| ||||||| Sbjct 896814 TGGACGATTTG--ATGGTTCCCAAATTATTTTGGTTCAGCTTTC-TGTTGCACGCATCTT 896758 Query 129821 TGTACATCATGTACGGCGTGCCCGTTTCGACTTGCGTTTC 129860 |||| | |||| ||||| |||| ||||||| ||| || || Sbjct 896757 TGTATAGCATGAACGGCATGCCGGTTTCGATTTGTGTCTC 896718 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419727212223010