Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Metschnikowia_20australis_20[genbank_20GCA_5F002073855.1_202017-03- 29] 154 sequences; 14,350,841 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq73 266 6e-66 seq68 212 1e-49 >seq73 Length=169253 Score = 266 bits (294), Expect = 6e-66 Identities = 1207/1890 (64%), Gaps = 65/1890 (3%) Strand=Plus/Minus Query 243741 TGAACTGGACGGGTGCGACGGCGGCCTTGGTCCTCAGGTAGTACATGCCGGTCTTGAGTC 243800 ||||||||| | ||| |||| |||| || |||| ||||||||| || ||||| | || Sbjct 117846 TGAACTGGATAGCTGCCGCGGCAGCCTGTGTTCTCAAGTAGTACATACCAGTCTTCAATC 117787 Query 243801 CACTGGACCAGGCGTGGAGGTGCATGGCCGTCAGCTTCTTCATCTTGAGCTTTGGGTCGT 243860 | | |||| ||| | |||||||| |||| ||| ||| || | | | | || Sbjct 117786 CCTTTTTCCAGCCGTAAAAGTGCATGGAGGTCAACTTACCCATGGTGGGGTCTTTGATGT 117727 Query 243861 CCTCGCACAGAAAGAGGTTGAGGGACTGGCTCTGGTCGACGAAGGGCGCCCGCTCTGCGG 243920 || ||| | ||||||| ||||| | ||||| ||| | || || | Sbjct 117726 G------------GATGTTCAAGGACTGGGATTGGTCAATGAAGGCCGCTCTGTCGGCAG 117679 Query 243921 CCATGGTGATGAGGTCCTTCTGAGATATCTCATACGCCGTCTTGTAGATGGGCTTGAGGT 243980 ||||| ||| | || |||||| || || || || | |||||||| | || ||||| || Sbjct 117678 CCATGTCGATAATGTGCTTCTGCGAGATTTCCCACACTGTCTTGTACAAGGCCTTGATGT 117619 Query 243981 GCTCGGGGAACCCTTCG--ATGTTCTGCACCGAGCCCTTGTGGACGATGAGCTGGGTGCG 244038 || |||| || | | | ||| | ||| || |||| |||| | | | Sbjct 117618 CGTCAGGGATG--TTGGGCAAGGACTGGATCGAACCGTTGTTAGAAATGATGTTGTTCTT 117561 Query 244039 CATGTTATCGTTCCACAGGCCCAAGCGCTCCAGCGCCTCGACCAGGTGCCTGTTCACCAC 244098 |||| |||||||| || |||||| ||| ||| | || |||| ||| || | Sbjct 117560 CATGGAGTCGTTCCAGAGACCCAAGTCAACCAAGTCCTTCAACATGTGCGAGTTGACAAT 117501 Query 244099 CTGAAACTCTCCCGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGGCTCGATGCT 244158 |||||||| || | ||||| | | ||||| ||| | || ||||||| | Sbjct 117500 TTGAAACTCACCTGCAAGCACTCTTCTGGAGTAGATATTGGAGGTGTAGGGCTCGAAACA 117441 Query 244159 CTCCGTGTTGCCCAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACACCAGCAGACT 244218 ||| |||| |||| ||||||| |||| ||||| ||||| || | ||| |||| Sbjct 117440 CTCGTTGTTTCCCAAGATCTGCGACGTGGAAGCAGTTGGCATTGGTGCCACGAGCAACGA 117381 Query 244219 GTTCCTCACGCCGTGCCTCTGGATGCGGAGTCTGAGCTCGTTCCAGTCCCACATGCCCGA 244278 ||| || | |||||| | | | | | | | || ||||||||||| || | Sbjct 117380 GTTTCTGAGCCCGTGCTTGGCCAAGTTCTGCTTCAACGTGTCCCAGTCCCACAACCCGGT 117321 Query 244279 GAGGTCCTCGCGTTTGAGGCCCCACATGTCAAACTGCAGCAGCCCCTT-GCTGACGGGGC 244337 | ||| || ||| ||||| |||| |||||| || ||||| | | ||| | Sbjct 117320 G-GGTTTTCT-GTT-------CCACAAGTCATACTGCAACAAGCCCTTAGAAGCCGGCGA 117270 Query 244338 TGCCCTCGTAGGTCGGGTAGGGACCGTCGCGCTGGGCCAGCT---TACAGCTCTCGTCGA 244394 ||| | ||| ||| ||| ||||| || ||||| |||| || || |||| | Sbjct 117269 -GCCTTGGTACGTCTCGTATGGACCTTCTTCTTGGGCAAGCTCGATAGAGGACTCGACT- 117212 Query 244395 GGGCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCCTTGCCGCAGG 244454 ||||||| |||||||||||| || ||| |||||| || ||||| | | || Sbjct 117211 --GCGGCGTGGTAGATGGTCTCAAAAATCTGAATGTTCAACTCCCGGGCTTCCTGGGAGT 117154 Query 244455 TGAAGGGGATGCCCATCATCATGAAGACGTCGGCCAGTCCCTGCACGCCGATGCCGATGG 244514 ||| || | | || | |||||| | ||||| || || || ||||||| | || | Sbjct 117153 CGAAAGGCAATCTCAAGACCATGAACGCATCGGCAAGACCTTGTACGCCGACCGCAATTG 117094 Query 244515 GTCTGTGTCGCTTGTTGGAGCGCATGGCTTCGGGCACGGGGTAAAAGTTGCCGTCGATCA 244574 | |||| || | ||||||| | |||| || ||||| || || |||| ||| || | Sbjct 117093 GCCTGTTTCTCATGTTGGATCTTCTGGCCTCTTCGACGGGATAGAAATTGCGGTCAATGA 117034 Query 244575 CCTTGTTGAGGTTGCGGGTGATCATGCGGACGACGTCGGCCAGCAGCTGAAAGTCGTACT 244634 |||| | ||| | ||| | | | || | || | || |||| |||| Sbjct 117033 TTCTGTTCAAGTTTCTGGTCACAACCTTGGTAACTTGATGCAACTTCTCGAAGTTGTAC- 116975 Query 244635 CGTAGGGATCCTCGGCGATGGTGATCCTCACAAACTCGTTGAGGGCGACGCTGGCCAGGT 244694 | | ||| || || | | || ||| || | ||||| |||| || Sbjct 116974 CACACGGA----CGTGGA-GTTTTTCTCCACGAAAGAAGGCAAGGCGATCGACGCCAAGT 116920 Query 244695 TGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAGGTTACTGC 244754 | || || || || || || | | ||||| || |||||| || | ||| Sbjct 116919 TACACACAGCGACTTCGTCGGGCGACGAGTACTCAACGATCTCGCAACACAAGTTGGAAG 116860 Query 244755 ACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTTGTAGAGCA 244814 ||||||| | |||| || || || |||| ||| ||||||| ||||||||||| | || Sbjct 116859 ACTTGATCATACCCAAGTTCTTTTGGTTGGTCTTTTCGTTGCACGCGTCCTTGTACAACA 116800 Query 244815 TGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAGGTCCCTAGCCT 244874 | || || ||||| ||| ||| || | | || | || |||||| | |||| Sbjct 116799 TAAATGGAGTGCCGGTTTCGGTCTGCGCTTCCAAGATGGCGTACCAGAGCTTTTGTGCCT 116740 Query 244875 TGACCGTC---CTGCGAGCCTTGCCCTCTGCCTCGTAGCGGGTGTACAGGGCCTCGAACT 244931 | || || |||| || ||||||| |||||| ||| | ||||||||||| Sbjct 116739 TCACGGTAGATCTGCC-GCG--GCCCTCTCTCTCGTATTTCTCGTATAAGGCCTCGAACT 116683 Query 244932 CGGGGCCCCAGACCTC-GTCTAGGC-CGGGGCACGAC-GCCGGGCACATGAGACTCCACT 244988 || || || ||| | | | | |||| | || | | | ||| | |||| | Sbjct 116682 CGTCACCGTAGCACTCAGGCAAACCACGGGCCTCGTTTGGAGAGAACAAGG---TCCAGT 116626 Query 244989 CGCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGAGGT 245048 | || | | | ||| |||| |||||| | ||| |||||||| || || |||| | || Sbjct 116625 CACCATCTTGTTCGACTCTCTTCATGAACAAGTCCGGGATCCAAAGCGCAGGGAACAAGT 116566 Query 245049 CCCTGGTCCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGACGT 245108 | |||| || | || || ||| |||||| || | || | ||| ||||||| || Sbjct 116565 CTCTGGCTCTGTTTTCTTCTTTGCCGTGGTTCTTTCTGATGTCGATAAAATCAAAGATGT 116506 Query 245109 CGACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCCTGGT 245168 | ||||||| ||||||| |||| || | ||| || || | |||||| |||||||||| Sbjct 116505 CCGCGTGCCATGGCTCCAAATAGAGGGCAAAGGCACCAGGTCTCTTGTTACCTCCCTGGT 116446 Query 245169 CCACCATCCTCTCGAGCG----CGTTGAAGATGCGCAGGGTAGGCACTATGCCGTTAGAG 245224 || | | || ||| |||||||| |||| |||| | || ||||| || Sbjct 116445 ----CAACATAACGTGCGGTATTGTTGAAGACACGCACCATAGGAATGATACCGTTGGAC 116390 Query 245225 TGGCCGTTGGTGCCCTTGATGTAGGCGCCCTTGCCCCTGAGGTTGCTGATGGACATGCCT 245284 |||||||| || |||||||| || || ||||| |||| ||| || ||| Sbjct 116389 GTTCCGTTGGTACCAGCAATGTAGGCTCCGGTGGACCTGATGTTGTGTATGTGCAAGCCA 116330 Query 245285 AGTCCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTATGCCCTCC 245344 | |||||||| |||||||| | ||| ||| |||| | |||||| || || || Sbjct 116329 ATACCGCCGGCAGATTTGGAGATCAAGGCACAGGTCTTCAAGGTGTCGTAGATTCCGTCG 116270 Query 245345 ATGCTGTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCT-GGGGCTTGGGGCTGCA 245403 ||| ||| ||||||| || || || || || |||| | ||||||||| | ||| Sbjct 116269 ATGGAGTCGTCCTTCATGGCGACGAGGAAACACGACGACATTTGGGGGCTTGGCG-TGCC 116211 Query 245404 CGAGTTGAACAGAGTGGGGCTGGCGTGGGTAAAGTAGCGGCTCGAGAGGAACCCGTACGT 245463 | |||||| || |||||| | |||| || |||||||| ||| | | ||| || Sbjct 116210 TGCGTTGAAAAGCGTGGGGGAGCCGTGCGTGAAGTAGCGCAGCGACATCATGTTGTAAGT 116151 Query 245464 CTGGAGCAGAGCGTCGATGTTGTCGCCGTGGATCTGCAGGGCGCACCTCATGAGGGTGTG 245523 || || | | | |||| ||||||||| || ||| | ||| || ||| Sbjct 116150 CTCGATGACACGGGGAATGTCCCTGCCGTGGATGCCCACTGCGACACGCATAAGCAAGTG 116091 Query 245524 CTGGGGCGTCTCGATGGGTCCCT-CGGGTC-CCTTGAGCATGTAGGAGCGCTCGAGCGTC 245581 ||| ||| ||||| | | | || | | || | ||||||| ||| || || || | ||| Sbjct 116090 CTGCGGCCTCTCG--GCGACGCTGCCGTTCACTTTGAGCAAGTACGACCGTTCCAAGGTC 116033 Query 245582 TTGAACCCAAAGTACGAGTAGCCAAAGTCG 245611 ||||| |||||| | |||| |||||| Sbjct 116032 TTGAATCCAAAGAAGTTGTAGTTGAAGTCG 116003 >seq68 Length=1116518 Score = 212 bits (234), Expect = 1e-49 Identities = 573/868 (66%), Gaps = 14/868 (2%) Strand=Plus/Plus Query 42285 ATCGAGCACCAGGACATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCC 42344 ||| || |||| || ||||| ||||||||||| || || || |||||||||| Sbjct 367686 ATCAAGTACCATGAAGTCTGGCAGATGTACAAGAAAGCCGAGGCGTCTTTCTGGACCGCC 367745 Query 42345 GAGGAGATTGACCTGGCCAAGGACACGGCCGGCTGG---GAGTCACTGTCTGAGAACGAA 42401 |||||||| ||| || ||||||||| || |||| | | || | || || || Sbjct 367746 GAGGAGATCGACTTGTCCAAGGACATCAACGACTGGAACAACAAAATGACCGACAATGAG 367805 Query 42402 AAGTTTTTCCTCAAAAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAG 42461 | ||||||| || | |||||||||| || ||||||||||| || ||||| || Sbjct 367806 AGGTTTTTCATCTCGCGTGTGTTGGCCTTCTTTGCTGCCTCTGACGGAATCGTCAACGAA 367865 Query 42462 AACCTGGCCACCAGGTTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGC 42521 ||| ||| | || ||||||||| | |||||| |||||||| || Sbjct 367866 AACTTGGTAGAAAACTTTTCTTCCGAGGTGCAGATCCCTGAGGCAAAGTGCTTCTATGGA 367925 Query 42522 TTCCAGATAGCCATAGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTAC 42581 |||||||| || ||||| | || || ||| ||| || || | |||| ||| Sbjct 367926 TTCCAGATCATGATGGAGAATATTCATTCGGAGACCTACTCCTTGTTGATTGACACCTAC 367985 Query 42582 ATCCTGGATCCCGTCGAGCGTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATC 42641 ||| ||| ||| || || |||| || || || || | || || || ||| Sbjct 367986 ATCAAGGACCCCAAGGAATCCGACTTCTTGTTTAATGCAATTGACAACATCCCATGTATC 368045 Query 42642 AAGAAGAAGGCGGACTGGGCGCTCAACTGGATC-GAGAGTCCCGACGCAACGTTCGGCGA 42700 ||||| || || || ||||| | | |||||| | || | || || ||| ||||| Sbjct 368046 AAGAAAAAAGCCGATTGGGCCTTGAGGTGGATCAGTGA-TAAGGAGGCCTTGTTTGGCGA 368104 Query 42701 GAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCAT 42760 ||| |||| ||||| | ||||| ||||| |||| ||||| ||| | || ||||| || Sbjct 368105 GAGATTGGTTGCCTTCGCTGCCGTTGAGGGTGTCTTTTTCTCAGGCTCATTTGCCTCGAT 368164 Query 42761 CTTCTGGCTCAAGCAGAAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAG 42820 ||||||| | ||| ||| | | |||||| || ||||| || || ||||| | || | Sbjct 368165 CTTCTGGTTAAAGAAGAGAGGCTTGATGCCTGGCCTCACGTTTTCAAACGAGTTGATTTG 368224 Query 42821 CAGGGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCA 42880 | | |||||||| |||| | |||||||| || | |||||||| ||| | | | Sbjct 368225 CCGTGACGAGGGCTTGCACACTGACTTTGCTTGTTTGTTGTTCTCG---CACTTGAAAAA 368281 Query 42881 CAAGCCCTCGAAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGA 42940 || ||| | | | ||| | || | || ||||| || || |||||||| Sbjct 368282 CAGACCCGCCCAAAAAATTGTCGAGAGAATTGTTACCGAGGCTGTTTCCATTGAGAAGGA 368341 Query 42941 GTTCCTCACGCAGTCGCTGCCCGTGTCCCTGGTCGGCATGAACCACGACCTCATGTGCAA 43000 || | ||||| | || |||| | || | || |||||| | || | |||||| | Sbjct 368342 GTACTTCACGGATTCCTTGCCATCTAGCTTGTTGGGTATGAACAGCAACTTGATGTGCCA 368401 Query 43001 GTACATCCAGTACGTCGCCGAC-CAT--CTCCTGTGCCAGATGGGTCTCAGCCGCCTCTA 43057 ||| | ||| ||||||||| || ||| | |||| | || || | || Sbjct 368402 GTATGTGGAGTTTGTCGCCGACAGATTGCTCGT-TGCC--TTAGGCAACAAAAAGGTGTA 368458 Query 43058 CAACACGCCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTT 43117 ||| | ||| |||||||| ||||| ||||| || |||| || ||||||||||| Sbjct 368459 CAATGTTACCAACCCATTCGACTTCATGGAAAACATTTCTTTGGCTGGTAAGACCAACTT 368518 Query 43118 TTTCGAGAAGCGCGTCGCCGACTACCAG 43145 ||||||||| | || ||||||||||| Sbjct 368519 CTTCGAGAAGAGAGTATCCGACTACCAG 368546 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944337382147040