Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Metschnikowia_20australis_20[genbank_20GCA_5F002073855.1_202017-03-
29] 154 sequences; 14,350,841 total letters
Query= NC_010240.1
Length=169794
Score E
Sequences producing significant alignments: (Bits) Value
seq96 105 7e-18
seq79 105 7e-18
seq91 98.7 1e-15
>seq96
Length=44914
Score = 105 bits (116), Expect = 7e-18
Identities = 164/232 (71%), Gaps = 2/232 (1%)
Strand=Plus/Plus
Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040
||| |||||||| | | |||||||||||||||| |||||| || || ||||| || |
Sbjct 32 ACCACCTCTTAATCTGAGCACCAAATGCAATGTGGACTCCTTCTGGATGTTGTAGTCGGA 91
Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100
|| || | |||| || | |||||||| ||||| || | || || ||||| | |||
Sbjct 92 CAATGTTCTGCCGTCCTCCAATTGCTTACCGGCGAAGATCAATCTTTGTTGGTCTGGTGG 151
Query 42101 CACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCA 42159
| || |||||| | | ||| | || | ||||| | | | ||||| | || |
Sbjct 152 AATGCCCTCCTTAT-CTTGAATCTTGGCTTTGACATTATCAATGGTGTCCGAGGCCTCGA 210
Query 42160 CATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATTTT 42211
| |||| ||||| || || || ||||| || || || ||||||||||||||
Sbjct 211 CCTCGAGTGTGATTGTCTTTCCGGTTAGTGTTTTGACGAAGATTTGCATTTT 262
>seq79
Length=900310
Score = 105 bits (116), Expect = 7e-18
Identities = 160/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040
||| ||||| || | | ||||||||||| ||| |||||| || || ||||| ||||
Sbjct 649556 ACCACCTCTCAATCTGAGGACCAAATGCAACGTGGACTCCTTCTGGATGTTGTAGTCAGA 649497
Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100
|| || | |||| || | ||||||||||||||| || | || |||||||| | |||
Sbjct 649496 CAAGGTTCTGCCGTCCTCCAACTGCTTACCAGCGAAGATCAATCTTTGCTGGTCAGGTGG 649437
Query 42101 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 42160
| | |||||||| ||| || |||| | | | |||||| | || ||
Sbjct 649436 AATTCCTTCCTTGTCTTGGATCTTGGCCTTGACATTGTCGATGGTGTCGGAGGCCTCGAC 649377
Query 42161 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208
|| | |||||||| || ||||||| ||||| || |||||||||||
Sbjct 649376 CTCCAAAGTGATGGTCTTACCCGTTAAGGTCTTGACGAAGATTTGCAT 649329
>seq91
Length=77570
Score = 98.7 bits (108), Expect = 1e-15
Identities = 160/228 (70%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 41982 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 42041
|| ||||| || | | |||||||||||||||| |||||| || || ||||| |||| |
Sbjct 640 CCGCCTCTCAATCTGAGCACCAAATGCAATGTGGACTCCTTCTGGATGTTGTAGTCAGAC 581
Query 42042 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGC 42101
| || | |||| || | |||||||| ||||| || | || || ||||| | |||
Sbjct 580 AATGTTCTGCCGTCCTCCAATTGCTTACCGGCGAAAATCAATCTTTGTTGGTCTGGTGGA 521
Query 42102 ACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 42160
| || |||||| | | ||| | || | ||||| | | | ||||| | || ||
Sbjct 520 ATGCCCTCCTTAT-CTTGAATCTTGGCTTTGACATTATCAATGGTGTCAGAGGCCTCGAC 462
Query 42161 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208
|||| ||||| || || || || | ||||| ||||||||||||||
Sbjct 461 CTCGAGTGTGATTGTCTTTCCGGTCAAGGTCTTGACAAAGATTTGCAT 414
Score = 91.5 bits (100), Expect = 2e-13
Identities = 159/229 (69%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040
||| || || || | | |||||||||||||||| |||||| || || ||||| || |
Sbjct 413 ACCACCCCTCAATCTGAGCACCAAATGCAATGTGGACTCCTTCTGGATGTTGTAGTCGGA 354
Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100
|| || | |||| || | |||||||| ||||| || | || || ||||| | |||
Sbjct 353 CAATGTTCTGCCGTCCTCCAATTGCTTACCGGCGAAGATCAATCTTTGTTGGTCTGGTGG 294
Query 42101 CACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCA 42159
| || |||||| | | ||| | || | ||||| | | | ||||| | || |
Sbjct 293 AATGCCCTCCTTAT-CTTGAATCTTGGCTTTGACATTATCAATGGTGTCCGAGGCCTCGA 235
Query 42160 CATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208
| |||| ||||| || || || || | ||||| ||||||||||||||
Sbjct 234 CCTCGAGTGTGATTGTCTTTCCGGTCAAGGTCTTGACAAAGATTTGCAT 186
Score = 82.4 bits (90), Expect = 8e-11
Identities = 99/135 (73%), Gaps = 0/135 (0%)
Strand=Plus/Minus
Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040
||| |||||||| | | |||||||||||||||| |||||| || || ||||| || |
Sbjct 185 ACCACCTCTTAATCTGAGCACCAAATGCAATGTGGACTCCTTCTGGATGTTGTAGTCGGA 126
Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100
|| || | |||| || | |||||||| ||||| || | || || ||||| | |||
Sbjct 125 CAATGTTCTGCCGTCCTCCAATTGCTTACCGGCGAAAATCAATCTTTGTTGGTCTGGTGG 66
Query 42101 CACGCTCTCCTTGTC 42115
| || |||||| ||
Sbjct 65 AATGCCCTCCTTATC 51
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 543211754315360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |