Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Metschnikowia_20australis_20[genbank_20GCA_5F002073855.1_202017-03- 29] 154 sequences; 14,350,841 total letters Query= NC_010240.1 Length=169794 Score E Sequences producing significant alignments: (Bits) Value seq96 105 7e-18 seq79 105 7e-18 seq91 98.7 1e-15 >seq96 Length=44914 Score = 105 bits (116), Expect = 7e-18 Identities = 164/232 (71%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040 ||| |||||||| | | |||||||||||||||| |||||| || || ||||| || | Sbjct 32 ACCACCTCTTAATCTGAGCACCAAATGCAATGTGGACTCCTTCTGGATGTTGTAGTCGGA 91 Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100 || || | |||| || | |||||||| ||||| || | || || ||||| | ||| Sbjct 92 CAATGTTCTGCCGTCCTCCAATTGCTTACCGGCGAAGATCAATCTTTGTTGGTCTGGTGG 151 Query 42101 CACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCA 42159 | || |||||| | | ||| | || | ||||| | | | ||||| | || | Sbjct 152 AATGCCCTCCTTAT-CTTGAATCTTGGCTTTGACATTATCAATGGTGTCCGAGGCCTCGA 210 Query 42160 CATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATTTT 42211 | |||| ||||| || || || ||||| || || || |||||||||||||| Sbjct 211 CCTCGAGTGTGATTGTCTTTCCGGTTAGTGTTTTGACGAAGATTTGCATTTT 262 >seq79 Length=900310 Score = 105 bits (116), Expect = 7e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040 ||| ||||| || | | ||||||||||| ||| |||||| || || ||||| |||| Sbjct 649556 ACCACCTCTCAATCTGAGGACCAAATGCAACGTGGACTCCTTCTGGATGTTGTAGTCAGA 649497 Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100 || || | |||| || | ||||||||||||||| || | || |||||||| | ||| Sbjct 649496 CAAGGTTCTGCCGTCCTCCAACTGCTTACCAGCGAAGATCAATCTTTGCTGGTCAGGTGG 649437 Query 42101 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 42160 | | |||||||| ||| || |||| | | | |||||| | || || Sbjct 649436 AATTCCTTCCTTGTCTTGGATCTTGGCCTTGACATTGTCGATGGTGTCGGAGGCCTCGAC 649377 Query 42161 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 || | |||||||| || ||||||| ||||| || ||||||||||| Sbjct 649376 CTCCAAAGTGATGGTCTTACCCGTTAAGGTCTTGACGAAGATTTGCAT 649329 >seq91 Length=77570 Score = 98.7 bits (108), Expect = 1e-15 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 41982 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 42041 || ||||| || | | |||||||||||||||| |||||| || || ||||| |||| | Sbjct 640 CCGCCTCTCAATCTGAGCACCAAATGCAATGTGGACTCCTTCTGGATGTTGTAGTCAGAC 581 Query 42042 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGC 42101 | || | |||| || | |||||||| ||||| || | || || ||||| | ||| Sbjct 580 AATGTTCTGCCGTCCTCCAATTGCTTACCGGCGAAAATCAATCTTTGTTGGTCTGGTGGA 521 Query 42102 ACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 42160 | || |||||| | | ||| | || | ||||| | | | ||||| | || || Sbjct 520 ATGCCCTCCTTAT-CTTGAATCTTGGCTTTGACATTATCAATGGTGTCAGAGGCCTCGAC 462 Query 42161 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 |||| ||||| || || || || | ||||| |||||||||||||| Sbjct 461 CTCGAGTGTGATTGTCTTTCCGGTCAAGGTCTTGACAAAGATTTGCAT 414 Score = 91.5 bits (100), Expect = 2e-13 Identities = 159/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040 ||| || || || | | |||||||||||||||| |||||| || || ||||| || | Sbjct 413 ACCACCCCTCAATCTGAGCACCAAATGCAATGTGGACTCCTTCTGGATGTTGTAGTCGGA 354 Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100 || || | |||| || | |||||||| ||||| || | || || ||||| | ||| Sbjct 353 CAATGTTCTGCCGTCCTCCAATTGCTTACCGGCGAAGATCAATCTTTGTTGGTCTGGTGG 294 Query 42101 CACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCA 42159 | || |||||| | | ||| | || | ||||| | | | ||||| | || | Sbjct 293 AATGCCCTCCTTAT-CTTGAATCTTGGCTTTGACATTATCAATGGTGTCCGAGGCCTCGA 235 Query 42160 CATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 | |||| ||||| || || || || | ||||| |||||||||||||| Sbjct 234 CCTCGAGTGTGATTGTCTTTCCGGTCAAGGTCTTGACAAAGATTTGCAT 186 Score = 82.4 bits (90), Expect = 8e-11 Identities = 99/135 (73%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040 ||| |||||||| | | |||||||||||||||| |||||| || || ||||| || | Sbjct 185 ACCACCTCTTAATCTGAGCACCAAATGCAATGTGGACTCCTTCTGGATGTTGTAGTCGGA 126 Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100 || || | |||| || | |||||||| ||||| || | || || ||||| | ||| Sbjct 125 CAATGTTCTGCCGTCCTCCAATTGCTTACCGGCGAAAATCAATCTTTGTTGGTCTGGTGG 66 Query 42101 CACGCTCTCCTTGTC 42115 | || |||||| || Sbjct 65 AATGCCCTCCTTATC 51 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 543211754315360