Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Metschnikowia_20australis_20[genbank_20GCA_5F002073855.1_202017-03-
29] 154 sequences; 14,350,841 total letters
Query= NC_012639.1
Length=141291
Score E
Sequences producing significant alignments: (Bits) Value
seq96 122 8e-23
seq91 113 4e-20
>seq96
Length=44914
Score = 122 bits (134), Expect = 8e-23
Identities = 153/210 (73%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 45131 CACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTC 45190
||| | ||||| || || ||||| ||||| || || ||| | ||| | || ||
Sbjct 50 CACCAAATGCAATGTGGACTCCTTCTGGATGTTGTAGTCGGACAATGTTCTGCCGTCCTC 109
Query 45191 CAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTG 45250
|||||| || || ||| | ||||||| ||| ||||| || |||||||| || ||||||||
Sbjct 110 CAATTGCTTACCGGCGAAGATCAATCTTTGTTGGTCTGGTGGAATGCCCTCCTTATCTTG 169
Query 45251 AATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTT 45310
||| || ||||| || | |||||| || | |||||| ||||| || | || ||
Sbjct 170 AATCTTGGCTTTGACATTATCAATGGTGTCCGAGGCCTCGACCTCGAGTGTGATTGTCTT 229
Query 45311 GCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|||||||| ||||| || || ||||||||
Sbjct 230 TCCGGTTAGTGTTTTGACGAAGATTTGCAT 259
>seq91
Length=77570
Score = 113 bits (124), Expect = 4e-20
Identities = 151/210 (72%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 45131 CACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTC 45190
||| | ||||| || || ||||| ||||| || || ||| | ||| | || ||
Sbjct 395 CACCAAATGCAATGTGGACTCCTTCTGGATGTTGTAGTCGGACAATGTTCTGCCGTCCTC 336
Query 45191 CAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTG 45250
|||||| || || ||| | ||||||| ||| ||||| || |||||||| || ||||||||
Sbjct 335 CAATTGCTTACCGGCGAAGATCAATCTTTGTTGGTCTGGTGGAATGCCCTCCTTATCTTG 276
Query 45251 AATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTT 45310
||| || ||||| || | |||||| || | |||||| ||||| || | || ||
Sbjct 275 AATCTTGGCTTTGACATTATCAATGGTGTCCGAGGCCTCGACCTCGAGTGTGATTGTCTT 216
Query 45311 GCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
||||| | || || ||||| ||||||||
Sbjct 215 TCCGGTCAAGGTCTTGACAAAGATTTGCAT 186
Score = 109 bits (120), Expect = 5e-19
Identities = 150/210 (71%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 45131 CACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTC 45190
||| | ||||| || || ||||| ||||| || || || | ||| | || ||
Sbjct 623 CACCAAATGCAATGTGGACTCCTTCTGGATGTTGTAGTCAGACAATGTTCTGCCGTCCTC 564
Query 45191 CAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTG 45250
|||||| || || ||| | ||||||| ||| ||||| || |||||||| || ||||||||
Sbjct 563 CAATTGCTTACCGGCGAAAATCAATCTTTGTTGGTCTGGTGGAATGCCCTCCTTATCTTG 504
Query 45251 AATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTT 45310
||| || ||||| || | |||||| || | |||||| ||||| || | || ||
Sbjct 503 AATCTTGGCTTTGACATTATCAATGGTGTCAGAGGCCTCGACCTCGAGTGTGATTGTCTT 444
Query 45311 GCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
||||| | || || ||||| ||||||||
Sbjct 443 TCCGGTCAAGGTCTTGACAAAGATTTGCAT 414
Score = 89.7 bits (98), Expect = 5e-13
Identities = 120/167 (72%), Gaps = 0/167 (0%)
Strand=Plus/Minus
Query 45131 CACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTC 45190
||| | ||||| || || ||||| ||||| || || ||| | ||| | || ||
Sbjct 167 CACCAAATGCAATGTGGACTCCTTCTGGATGTTGTAGTCGGACAATGTTCTGCCGTCCTC 108
Query 45191 CAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTG 45250
|||||| || || ||| | ||||||| ||| ||||| || |||||||| || ||||||||
Sbjct 107 CAATTGCTTACCGGCGAAAATCAATCTTTGTTGGTCTGGTGGAATGCCCTCCTTATCTTG 48
Query 45251 AATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGA 45297
||| || ||||| || | |||||| || | |||||| ||||
Sbjct 47 AATCTTGGCTTTGACATTATCAATGGTGTCAGAGGCCTCGACCTCGA 1
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 452002329893840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |