Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Metschnikowia_20australis_20[genbank_20GCA_5F002073855.1_202017-03- 29] 154 sequences; 14,350,841 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq96 122 8e-23 seq91 113 4e-20 >seq96 Length=44914 Score = 122 bits (134), Expect = 8e-23 Identities = 153/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 45131 CACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTC 45190 ||| | ||||| || || ||||| ||||| || || ||| | ||| | || || Sbjct 50 CACCAAATGCAATGTGGACTCCTTCTGGATGTTGTAGTCGGACAATGTTCTGCCGTCCTC 109 Query 45191 CAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTG 45250 |||||| || || ||| | ||||||| ||| ||||| || |||||||| || |||||||| Sbjct 110 CAATTGCTTACCGGCGAAGATCAATCTTTGTTGGTCTGGTGGAATGCCCTCCTTATCTTG 169 Query 45251 AATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTT 45310 ||| || ||||| || | |||||| || | |||||| ||||| || | || || Sbjct 170 AATCTTGGCTTTGACATTATCAATGGTGTCCGAGGCCTCGACCTCGAGTGTGATTGTCTT 229 Query 45311 GCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 |||||||| ||||| || || |||||||| Sbjct 230 TCCGGTTAGTGTTTTGACGAAGATTTGCAT 259 >seq91 Length=77570 Score = 113 bits (124), Expect = 4e-20 Identities = 151/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 45131 CACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTC 45190 ||| | ||||| || || ||||| ||||| || || ||| | ||| | || || Sbjct 395 CACCAAATGCAATGTGGACTCCTTCTGGATGTTGTAGTCGGACAATGTTCTGCCGTCCTC 336 Query 45191 CAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTG 45250 |||||| || || ||| | ||||||| ||| ||||| || |||||||| || |||||||| Sbjct 335 CAATTGCTTACCGGCGAAGATCAATCTTTGTTGGTCTGGTGGAATGCCCTCCTTATCTTG 276 Query 45251 AATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTT 45310 ||| || ||||| || | |||||| || | |||||| ||||| || | || || Sbjct 275 AATCTTGGCTTTGACATTATCAATGGTGTCCGAGGCCTCGACCTCGAGTGTGATTGTCTT 216 Query 45311 GCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||||| | || || ||||| |||||||| Sbjct 215 TCCGGTCAAGGTCTTGACAAAGATTTGCAT 186 Score = 109 bits (120), Expect = 5e-19 Identities = 150/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 45131 CACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTC 45190 ||| | ||||| || || ||||| ||||| || || || | ||| | || || Sbjct 623 CACCAAATGCAATGTGGACTCCTTCTGGATGTTGTAGTCAGACAATGTTCTGCCGTCCTC 564 Query 45191 CAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTG 45250 |||||| || || ||| | ||||||| ||| ||||| || |||||||| || |||||||| Sbjct 563 CAATTGCTTACCGGCGAAAATCAATCTTTGTTGGTCTGGTGGAATGCCCTCCTTATCTTG 504 Query 45251 AATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTT 45310 ||| || ||||| || | |||||| || | |||||| ||||| || | || || Sbjct 503 AATCTTGGCTTTGACATTATCAATGGTGTCAGAGGCCTCGACCTCGAGTGTGATTGTCTT 444 Query 45311 GCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||||| | || || ||||| |||||||| Sbjct 443 TCCGGTCAAGGTCTTGACAAAGATTTGCAT 414 Score = 89.7 bits (98), Expect = 5e-13 Identities = 120/167 (72%), Gaps = 0/167 (0%) Strand=Plus/Minus Query 45131 CACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTC 45190 ||| | ||||| || || ||||| ||||| || || ||| | ||| | || || Sbjct 167 CACCAAATGCAATGTGGACTCCTTCTGGATGTTGTAGTCGGACAATGTTCTGCCGTCCTC 108 Query 45191 CAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTG 45250 |||||| || || ||| | ||||||| ||| ||||| || |||||||| || |||||||| Sbjct 107 CAATTGCTTACCGGCGAAAATCAATCTTTGTTGGTCTGGTGGAATGCCCTCCTTATCTTG 48 Query 45251 AATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGA 45297 ||| || ||||| || | |||||| || | |||||| |||| Sbjct 47 AATCTTGGCTTTGACATTATCAATGGTGTCAGAGGCCTCGACCTCGA 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 452002329893840