Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Metschnikowia_20australis_20[genbank_20GCA_5F002073855.1_202017-03- 29] 154 sequences; 14,350,841 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq68 224 1e-53 seq79 116 4e-21 seq96 113 5e-20 seq91 104 2e-17 >seq68 Length=1116518 Score = 224 bits (248), Expect = 1e-53 Identities = 440/643 (68%), Gaps = 17/643 (3%) Strand=Plus/Minus Query 132876 CAAATGCTTGAACATCAAGCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAG 132935 ||| ||| ||||| ||| ||||||||||| |||||||||||||| | | |||| | Sbjct 368276 CAAGTGCGAGAACAACAAACAAGCAAAGTCAGTGTGCAAGCCCTCGTCACGGCAAATCAA 368217 Query 132936 TTCGTTGCTGAAA--GTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCG 132993 ||||| ||||| || | ||| ||||| | ||| | || || | ||| || || | | Sbjct 368216 CTCGTT--TGAAAACGTGAGGCCAGGCATCAAGCCTCTCTTCTTTAACCAGAAGATCGAG 368159 Query 132994 GCGAAACTGCCCGAAAAGAAGACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCG 133053 || || ||| || || ||||| ||||| ||||| ||||| || |||| | |||||| Sbjct 368158 GCAAATGAGCCTGAGAAAAAGACACCCTCAACGGCAGCGAAGGCAACCAATCTCTCGCCA 368099 Query 133054 AACGTGGCTTCTTTGCTGGCGATCCAGCGCAGCGCCCATTCGGCCTTTTCTTTGACGCAC 133113 ||| ||| || || |||||| | || ||||| ||||| |||| |||| || Sbjct 368098 AACAAGGCCTCCTTATCACTGATCCACCTCAAGGCCCAATCGGCTTTTTTCTTGATACAT 368039 Query 133114 GGCATCGTTTCGATGGCGTTCAACAAA----CGGAGTTTCTCTTCCGAGGAACGC-ACGT 133168 || || | || || || || ||||| |||| ||| ||| | || | | || Sbjct 368038 GGGATGTTGTCAATTGCATTAAACAAGAAGTCGGA--TTC-CTT--GGGGTCCTTGATGT 367984 Query 133169 AGGTGTCGATGAGGGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAAGC 133228 ||||||| || | || || | ||||| || | |||||||| ||| || || | Sbjct 367983 AGGTGTCAATCAACAAGGAGTAGGTCTCCGAATGAATATTCTCCATCATGATCTGGAATC 367924 Query 133229 CGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGCGAAACGCTCGACCAGATTTT 133288 | || |||||| ||||| | |||||| || || || || |||| |||| Sbjct 367923 CATAGAAGCACTTTGCCTCAGGGATCTGCACCTCGGAAGAAAAGTTTTCTACCAAGTTTT 367864 Query 133289 CGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCGCT 133348 |||||||||| ||||| ||| || || ||||||| ||| || ||||||| | || Sbjct 367863 CGTTGACGATTCCGTCAGAGGCAGCAAAGAAGGCCAACACACGCGAGATGAAAAACCTCT 367804 Query 133349 CGTTGTCGTTCAA---GCGCTCCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTCGA 133405 | |||||| ||| | | ||||||| |||||||||||| ||| | ||||||| Sbjct 367803 CATTGTCGGTCATTTTGTTGTTCCAGTCGTTGATGTCCTTGGACAAGTCGATCTCCTCGG 367744 Query 133406 CGGTCCAAAACGACGCCTCGGCTTTTTTGTACATACTCCACATGTCCGAATATTGTATGG 133465 ||||||| || |||||||||||||| |||||||| ||| | || || | || | Sbjct 367743 CGGTCCAGAAAGACGCCTCGGCTTTCTTGTACATCTGCCAGACTTCATGGTACTTGATAG 367684 Query 133466 GAAAAATCACAAACCGGCGGGGGTTTTCGCGCAACAGCGGCTC 133508 |||| | |||||| ||||| ||| || ||||| ||||| Sbjct 367683 GAAACAACACAAAACGGCGCTTGTTCTCTACCAACAAAGGCTC 367641 >seq79 Length=900310 Score = 116 bits (128), Expect = 4e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| || || | ||||| || |||||||| | || ||||||||| || Sbjct 649329 ATGCAAATCTTCGTCAAGACCTTAACGGGTAAGACCATCACTTTGGAGGTCGAGGCCTCC 649388 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | | || | || |||| ||||| || |||||||| | ||||| Sbjct 649389 GACACCATCGACAATGTCAAGGCCAAGATCCAAGACAAGGAAGGAATTCCACCTGACCAG 649448 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 || | | || | ||| || || ||| |||| |||| | ||| | ||||||||| Sbjct 649449 CAAAGATTGATCTTCGCTGGTAAGCAGTTGGAGGACGGCAGAACCTTGTCTGACTACAAC 649508 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||| ||||| | ||| |||||||||| || | |||||||| || Sbjct 649509 ATCCAGAAGGAGTCCACGTTGCATTTGGTCCTCAGATTGAGAGGTGG 649555 >seq96 Length=44914 Score = 113 bits (124), Expect = 5e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 38241 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300 ||||||||||| ||||| ||||| || || || || || ||||| |||| ||||||||| Sbjct 262 AAAATGCAAATCTTCGTCAAAACACTAACCGGAAAGACAATCACACTCGAGGTCGAGGCC 203 Query 38301 ACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGAC 38360 | |||| | | | | | |||| || || | || || ||||| ||||| | ||| Sbjct 202 TCGGACACCATTGATAATGTCAAAGCCAAGATTCAAGATAAGGAGGGCATTCCACCAGAC 143 Query 38361 CAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 38420 ||||| | | || | ||| || || || |||| |||| | || | ||||||| Sbjct 142 CAACAAAGATTGATCTTCGCCGGTAAGCAATTGGAGGACGGCAGAACATTGTCCGACTAC 83 Query 38421 AACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 |||||||| ||||| | || ||||||||||||| | || ||||| || Sbjct 82 AACATCCAGAAGGAGTCCACATTGCATTTGGTGCTCAGATTAAGAGGTGG 33 >seq91 Length=77570 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| || || || || | || || || || ||||| |||| ||||||||| | Sbjct 414 ATGCAAATCTTTGTCAAGACCTTGACCGGAAAGACAATCACACTCGAGGTCGAGGCCTCT 473 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | | |||| || || | || || ||||| ||||| | |||||| Sbjct 474 GACACCATTGATAATGTCAAAGCCAAGATTCAAGATAAGGAGGGCATTCCACCAGACCAA 533 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 || | | |||| ||| || || || |||| |||| | || | ||||||||| Sbjct 534 CAAAGATTGATTTTCGCCGGTAAGCAATTGGAGGACGGCAGAACATTGTCTGACTACAAC 593 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||| ||||| | || ||||||||||||| | ||||||||||| Sbjct 594 ATCCAGAAGGAGTCCACATTGCATTTGGTGCTCAGATTGAGAGGCGG 640 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| || || || || | || || || || ||||| |||| ||||||||| | Sbjct 186 ATGCAAATCTTTGTCAAGACCTTGACCGGAAAGACAATCACACTCGAGGTCGAGGCCTCG 245 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | | |||| || || | || || ||||| ||||| | |||||| Sbjct 246 GACACCATTGATAATGTCAAAGCCAAGATTCAAGATAAGGAGGGCATTCCACCAGACCAA 305 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 || | | || | ||| || || || |||| |||| | || | |||||||||| Sbjct 306 CAAAGATTGATCTTCGCCGGTAAGCAATTGGAGGACGGCAGAACATTGTCCGACTACAAC 365 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||| ||||| | || ||||||||||||| | ||||| || || Sbjct 366 ATCCAGAAGGAGTCCACATTGCATTTGGTGCTCAGATTGAGGGGTGG 412 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500171837167360