Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Metschnikowia_20australis_20[genbank_20GCA_5F002073855.1_202017-03- 29] 154 sequences; 14,350,841 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq96 143 6e-29 seq91 140 7e-28 >seq96 Length=44914 Score = 143 bits (158), Expect = 6e-29 Identities = 151/199 (76%), Gaps = 0/199 (0%) Strand=Plus/Plus Query 194944 GTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCT 195003 |||||||| || || || ||||| |||| | ||||| || || || | |||||||| Sbjct 63 GTGGACTCCTTCTGGATGTTGTAGTCGGACAATGTTCTGCCGTCCTCCAATTGCTTACCG 122 Query 195004 GCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTG 195063 |||||||| | || |||||||||||| |||||||| || || |||||||| || ||| Sbjct 123 GCGAAGATCAATCTTTGTTGGTCTGGTGGAATGCCCTCCTTATCTTGAATCTTGGCTTTG 182 Query 195064 ACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTT 195123 || || |||||||||||||| || || || || || | |||||||| || | ||| Sbjct 183 ACATTATCAATGGTGTCCGAGGCCTCGACCTCGAGTGTGATTGTCTTTCCGGTTAGTGTT 242 Query 195124 TTTACGAACACTTGCATTT 195142 || ||||| | |||||||| Sbjct 243 TTGACGAAGATTTGCATTT 261 >seq91 Length=77570 Score = 140 bits (154), Expect = 7e-28 Identities = 149/197 (76%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 194944 GTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCT 195003 |||||||| || || || ||||| |||| | ||||| || || || | |||||||| Sbjct 382 GTGGACTCCTTCTGGATGTTGTAGTCGGACAATGTTCTGCCGTCCTCCAATTGCTTACCG 323 Query 195004 GCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTG 195063 |||||||| | || |||||||||||| |||||||| || || |||||||| || ||| Sbjct 322 GCGAAGATCAATCTTTGTTGGTCTGGTGGAATGCCCTCCTTATCTTGAATCTTGGCTTTG 263 Query 195064 ACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTT 195123 || || |||||||||||||| || || || || || | |||||||| ||||| || Sbjct 262 ACATTATCAATGGTGTCCGAGGCCTCGACCTCGAGTGTGATTGTCTTTCCGGTCAAGGTC 203 Query 195124 TTTACGAACACTTGCAT 195140 || || || | |||||| Sbjct 202 TTGACAAAGATTTGCAT 186 Score = 125 bits (138), Expect = 2e-23 Identities = 146/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 194944 GTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCT 195003 |||||||| || || || ||||| || | | ||||| || || || | |||||||| Sbjct 610 GTGGACTCCTTCTGGATGTTGTAGTCAGACAATGTTCTGCCGTCCTCCAATTGCTTACCG 551 Query 195004 GCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTG 195063 ||||| || | || |||||||||||| |||||||| || || |||||||| || ||| Sbjct 550 GCGAAAATCAATCTTTGTTGGTCTGGTGGAATGCCCTCCTTATCTTGAATCTTGGCTTTG 491 Query 195064 ACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTT 195123 || || ||||||||||| || || || || || || | |||||||| ||||| || Sbjct 490 ACATTATCAATGGTGTCAGAGGCCTCGACCTCGAGTGTGATTGTCTTTCCGGTCAAGGTC 431 Query 195124 TTTACGAACACTTGCAT 195140 || || || | |||||| Sbjct 430 TTGACAAAGATTTGCAT 414 Score = 109 bits (120), Expect = 1e-18 Identities = 108/140 (77%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 194944 GTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCT 195003 |||||||| || || || ||||| |||| | ||||| || || || | |||||||| Sbjct 154 GTGGACTCCTTCTGGATGTTGTAGTCGGACAATGTTCTGCCGTCCTCCAATTGCTTACCG 95 Query 195004 GCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTG 195063 ||||| || | || |||||||||||| |||||||| || || |||||||| || ||| Sbjct 94 GCGAAAATCAATCTTTGTTGGTCTGGTGGAATGCCCTCCTTATCTTGAATCTTGGCTTTG 35 Query 195064 ACGTTCTCAATGGTGTCCGA 195083 || || ||||||||||| || Sbjct 34 ACATTATCAATGGTGTCAGA 15 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109479410854118