Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Metschnikowia_20australis_20[genbank_20GCA_5F002073855.1_202017-03- 29] 154 sequences; 14,350,841 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq68 192 7e-44 >seq68 Length=1116518 Score = 192 bits (212), Expect = 7e-44 Identities = 405/598 (68%), Gaps = 7/598 (1%) Strand=Plus/Minus Query 18952 AACATCAAACATGCAAAATCACAATGTAGTCCCTCGTCTCTACTTATCAATTCATTAGAA 19011 |||| |||||| ||||| ||| || | |||||||| | | ||||| || || ||| Sbjct 368266 AACAACAAACAAGCAAAGTCAGTGTGCAAGCCCTCGTCACGGCAAATCAACTCGTTTGAA 368207 Query 19012 AATGTTAAACCAGGCATCAGTCCTCttttttttAACCAGAATATAGAAGCAAATGATCCA 19071 || || | |||||||||| ||||| || ||||||||||| || || |||||||| || Sbjct 368206 AACGTGAGGCCAGGCATCAAGCCTCTCTTCTTTAACCAGAAGATCGAGGCAAATGAGCCT 368147 Query 19072 GAAAAGAATATACCTTCTACTGCTGCAAAAGCAACTAGTCTTTCTCCATAACTAG-CATC 19130 || || || | ||| || || || || || ||||| | ||| || ||| ||| || | || Sbjct 368146 GAGAAAAAGACACCCTCAACGGCAGCGAAGGCAACCAATCTCTCGCCA-AACAAGGCCTC 368088 Query 19131 ATTATTATGAATCCATTTCAGTGCCCAATCAGCCTTCTTTTTTACACATGGCATTGTCTC 19190 |||| | ||||| ||| |||||||| || || || || | |||||| || | || Sbjct 368087 CTTATCACTGATCCACCTCAAGGCCCAATCGGCTTTTTTCTTGATACATGGGATGTTGTC 368028 Query 19191 TATAGAATTAAATAGATACATACGCT-CATCTGTATCTTTAACATATGCATCTATCAATA 19249 || | |||||| | | | | | | | | | || || | || | || ||||| | Sbjct 368027 AATTGCATTAAACA-AGAAGTCGGATTCCTTGGGGTCCTTGATGTAGGTGTCAATCAACA 367969 Query 19250 AACTGTACATTTCTGAATGAATATTTTCTATAGCCATCTGAAATCCGTAAAAACATCTTG 19309 | ||| | || ||||||||||| || || ||||| ||||| || || || ||| Sbjct 367968 AGGAGTAGGTCTCCGAATGAATATTCTCCATCATGATCTGGAATCCATAGAAGCACTTTG 367909 Query 19310 CTTCTGTTATCTGTACTTCACTACAAAATCTTTCGACCAAATTTTCATTAACTATTCCAT 19369 | || | ||||| || || | |||| |||| ||||| ||||| || || ||||| | Sbjct 367908 CCTCAGGGATCTGCACCTCGGAAGAAAAGTTTTCTACCAAGTTTTCGTTGACGATTCCGT 367849 Query 19370 CACTAGCTGCAAAAAATGCTAATACATGTTTAATAAAATGTTTTTCATCTGAGGTTAAT- 19428 || || ||||| || || || ||| | || ||| | |||| ||| | | Sbjct 367848 CAGAGGCAGCAAAGAAGGCCAACACACGCGAGATGAAAAACCTCTCATTGTCGGTCATTT 367789 Query 19429 --GTATTCCAATCATTAATATCTTTAGATAAATCTACTTCTTCAACTGTCCAAAAAGAAG 19486 | ||||| || || || || || || || || | || || | ||||| ||||| | Sbjct 367788 TGTTGTTCCAGTCGTTGATGTCCTTGGACAAGTCGATCTCCTCGGCGGTCCAGAAAGACG 367729 Query 19487 CCTCTGCTTTTTTATACATGTTCCATATATCACGATATTGTATAGGAAATATAACAAA 19544 |||| ||||| || ||||| | ||| | ||| | || | |||||||| | ||||| Sbjct 367728 CCTCGGCTTTCTTGTACATCTGCCAGACTTCATGGTACTTGATAGGAAACAACACAAA 367671 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 562107717940560