Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Metschnikowia_20australis_20[genbank_20GCA_5F002073855.1_202017-03- 29] 154 sequences; 14,350,841 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq79 190 2e-42 seq134 100 2e-15 seq108 91.5 1e-12 >seq79 Length=900310 Score = 190 bits (210), Expect = 2e-42 Identities = 458/686 (67%), Gaps = 8/686 (1%) Strand=Plus/Plus Query 551910 AGAACTGCTTGCGAAAGAGCCAAACGAGCTCTTTCATCTGGTACTCAAACCACTATTGAA 551969 || |||||||||||| | ||||| || | | || ||| | ||||||| |||| ||| Sbjct 15278 AGGACTGCTTGCGAACGTGCCAAGAGAACCTTGTCCTCTTCTGCTCAAACATCTATCGAA 15337 Query 551970 GTAGATTCATTATTTGAGGGAATTGATTATAATACGCCTATTTCGAGGGCCAAATTTGAA 552029 |||| || || |||||||| |||| | | || | ||| | || |||| ||| ||| Sbjct 15338 ATAGACTCCTTGTTTGAGGGCGTTGACTTCTACACCTCGATTACCAGAGCCAGATTCGAA 15397 Query 552030 GATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAACAAGTTTTAAGAGAT 552089 || | ||| || | || ||| || || || || || || ||||||| |||| Sbjct 15398 GAGTTGTGTCACGACTTATTCAGATCTACCATGGACCCTGTGGAGAAAGTTTTGGGAGAC 15457 Query 552090 TCAAAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGTGGATCTACAAGAATT 552149 | ||||| || || ||| | || |||| ||||| || || ||||| || || |||||| Sbjct 15458 GCTAAGATCGACAAGTCCCAGGTGGATGAGATTGTTCTCGTGGGTGGCTCAACCAGAATT 15517 Query 552150 CCTAAAATTCGCGAAAT--GTTAAGTTCTTATTTCAATGGTAAAAAATTAAATGAAAGTG 552207 || || || | ||| | ||| | | || |||||||| || || || || Sbjct 15518 CCAAAGATAC-AGAAGTTGGTTTCGGAC-TACTTCAATGGGAAGGAACCAAGCAAATCCA 15575 Query 552208 TTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTCTTTCTGGAC 552267 | ||||| |||||||| ||||| || ||||| || | || || ||||| | || || Sbjct 15576 TCAATCCTGATGAGGCCGTTGCATACGGTGCTGCCGTACAGGCTGCTATCTTGTCCGGCG 15635 Query 552268 AAAC-TGATGAAAAACTACAAAATATTGTACTTG-TAGATGTTACTCCTCTATCTCTTGG 552325 | || | | ||||| | | |||| ||| | ||||| |||| ||||| | || Sbjct 15636 ATACTTCCTCTAAAAC--CCAGGACTTGTTGTTGTTGGATGTGGCTCCCTTATCTTTGGG 15693 Query 552326 TTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTACTATTCCTTG 552385 | ||||| | ||||| || |||||||| | || |||||| | || |||||| Sbjct 15694 CATTGAAACCGCCGGAGGAATCATGACTAAGTTGATTCCTAGAAACTCGACCATTCCTGC 15753 Query 552386 TAAAAAATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCTGTTACAATTCAAAT 552445 || || ||| || || ||||| | || || || | | ||| |||||| | Sbjct 15754 CAAGAAGTCTGAGACGTTCTCAACGTACGCTGACAACCAGCCAGGTGTCTTGATTCAAGT 15813 Query 552446 TTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGTACTTTTAATTTAGA 552505 || |||||| || |||| || || || ||| | || | || | || Sbjct 15814 TTATGAAGGCGAGAGAACCAAGACCGTGGACAACAATTTGTTGGGAAAATTCGAATTGTC 15873 Query 552506 AGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGATATCGATGC 552565 || ||||| ||||||||| | || ||||| ||| ||||||| || || ||||| || || Sbjct 15874 CGGCATTCCACCTGCTCCTAGAGGCGTACCCCAAGTTGAAGTCACGTTTGATATTGACGC 15933 Query 552566 CAATGGAATTTTGAATGTGACTGCTT 552591 ||||||||| ||||||||| |||||| Sbjct 15934 CAATGGAATCTTGAATGTGTCTGCTT 15959 >seq134 Length=667958 Score = 100 bits (110), Expect = 2e-15 Identities = 119/159 (75%), Gaps = 2/159 (1%) Strand=Plus/Minus Query 549995 ATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAAGTT 550054 || ||||| || || ||||||||||| |||||| || || |||||||||||| || Sbjct 175862 ATTGGTATTGACTTGGGAACCACATACTCTTGTGTGGGAGTGATGCAAAATGGTAAGGTC 175803 Query 550055 GAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACGGAA 550114 ||||| | ||||| ||||| ||| |||||| || || ||||||||| ||||||| || Sbjct 175802 GAAATCTTGGCCAACGATCAGGGTCACAGAATCACGCCGTCTTATGTTGCTTTCACCGAT 175743 Query 550115 ACTGA-ACATTTAGTTGGTGATGCAGCAAAATATCAAGC 550152 || | ||| | ||||||| || || || |||| || Sbjct 175742 CAGGAGAGATTGA-TTGGTGACGCTGCTAAGAATCAGGC 175705 >seq108 Length=6510 Score = 91.5 bits (100), Expect = 1e-12 Identities = 137/192 (71%), Gaps = 6/192 (3%) Strand=Plus/Minus Query 390807 ATTAATACCATTATCACCATATACACATTGAATTAATTTGTCATT--GGCATTTCTTACG 390864 || ||| |||| ||||| |||||| ||||||| | ||||| | | ||| || Sbjct 4350 ATCAATTCCATCTTCACCGTATACAAATTGAATGA---TGTCACCAAGAGAGTTCCTAGT 4294 Query 390865 -GTACCATCATACTCTACTTTAATGTCTTCTAACATTTTAACTAATTTTCTTTGGATATA 390923 ||||| ||||| | || | || || || ||| |||||||| | ||||| || Sbjct 4293 CGTACCGTCATAGTGAACCATGATATCCTCCAACGCCTTAACTAAACGACGCTGGATGTA 4234 Query 390924 ACCAGTGTCTGCAGTTTTAATTGCAGTATTAATAATACCTTCTCTTCCTGCCATAACTTG 390983 ||||| |||||||| || | || |||| ||||| ||| |||||||||||||| | || Sbjct 4233 TCCAGTCTCTGCAGTCTTCACGGCCGTATCAATAAGACCCTCTCTTCCTGCCATCGCATG 4174 Query 390984 GAAGAAAAATTC 390995 ||||||||| || Sbjct 4173 GAAGAAAAACTC 4162 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4029287855785460