Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Metschnikowia_20australis_20[genbank_20GCA_5F002073855.1_202017-03- 29] 154 sequences; 14,350,841 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq91 109 4e-19 seq96 95.1 9e-15 seq79 84.2 2e-11 >seq91 Length=77570 Score = 109 bits (120), Expect = 4e-19 Identities = 150/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 48557 CACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTC 48616 ||||||||| | ||| ||| || || || ||||| ||||| | ||| |||| || Sbjct 623 CACCAAATGCAATGTGGACTCCTTCTGGATGTTGTAGTCAGACAATGTTCTGCCGTCCTC 564 Query 48617 CAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCT 48676 ||| ||||||||||| || |||| || ||||| || | |||| ||||||||| || Sbjct 563 CAATTGCTTACCGGCGAAAATCAATCTTTGTTGGTCTGGTGGAATGCCCTCCTTATCTTG 504 Query 48677 AATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTT 48736 |||||| ||| ||| | | | | || || ||||| ||||| | || || || || Sbjct 503 AATCTTGGCTTTGACATTATCAATGGTGTCAGAGGCCTCGACCTCGAGTGTGATTGTCTT 444 Query 48737 TCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 ||| ||||| || || ||||| || ||||| Sbjct 443 TCCGGTCAAGGTCTTGACAAAGATTTGCAT 414 Score = 104 bits (114), Expect = 2e-17 Identities = 149/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 48557 CACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTC 48616 ||||||||| | ||| ||| || || || ||||| || || | ||| |||| || Sbjct 395 CACCAAATGCAATGTGGACTCCTTCTGGATGTTGTAGTCGGACAATGTTCTGCCGTCCTC 336 Query 48617 CAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCT 48676 ||| ||||||||||| || |||| || ||||| || | |||| ||||||||| || Sbjct 335 CAATTGCTTACCGGCGAAGATCAATCTTTGTTGGTCTGGTGGAATGCCCTCCTTATCTTG 276 Query 48677 AATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTT 48736 |||||| ||| ||| | | | | || || ||||| ||||| | || || || || Sbjct 275 AATCTTGGCTTTGACATTATCAATGGTGTCCGAGGCCTCGACCTCGAGTGTGATTGTCTT 216 Query 48737 TCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 ||| ||||| || || ||||| || ||||| Sbjct 215 TCCGGTCAAGGTCTTGACAAAGATTTGCAT 186 >seq96 Length=44914 Score = 95.1 bits (104), Expect = 9e-15 Identities = 147/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 48557 CACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTC 48616 ||||||||| | ||| ||| || || || ||||| || || | ||| |||| || Sbjct 50 CACCAAATGCAATGTGGACTCCTTCTGGATGTTGTAGTCGGACAATGTTCTGCCGTCCTC 109 Query 48617 CAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCT 48676 ||| ||||||||||| || |||| || ||||| || | |||| ||||||||| || Sbjct 110 CAATTGCTTACCGGCGAAGATCAATCTTTGTTGGTCTGGTGGAATGCCCTCCTTATCTTG 169 Query 48677 AATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTT 48736 |||||| ||| ||| | | | | || || ||||| ||||| | || || || || Sbjct 170 AATCTTGGCTTTGACATTATCAATGGTGTCCGAGGCCTCGACCTCGAGTGTGATTGTCTT 229 Query 48737 TCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 ||| || | ||||| || || || ||||| Sbjct 230 TCCGGTTAGTGTTTTGACGAAGATTTGCAT 259 >seq79 Length=900310 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 48558 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCC 48617 |||||||| | |||| ||| || || || ||||| ||||| | ||| |||| ||| Sbjct 649537 ACCAAATGCAACGTGGACTCCTTCTGGATGTTGTAGTCAGACAAGGTTCTGCCGTCCTCC 649478 Query 48618 AACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTA 48677 ||||||||||| || || |||| || || || || | |||| || |||||||| Sbjct 649477 AACTGCTTACCAGCGAAGATCAATCTTTGCTGGTCAGGTGGAATTCCTTCCTTGTCTTGG 649418 Query 48678 ATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTT 48737 ||||| || ||| | | | || || ||||| ||||||| || || || || Sbjct 649417 ATCTTGGCCTTGACATTGTCGATGGTGTCGGAGGCCTCGACCTCCAAAGTGATGGTCTTA 649358 Query 48738 CCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 ||||| || || || || || || ||||| Sbjct 649357 CCCGTTAAGGTCTTGACGAAGATTTGCAT 649329 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380936885027742