Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Metschnikowia_20australis_20[genbank_20GCA_5F002073855.1_202017-03- 29] 154 sequences; 14,350,841 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq79 152 3e-31 seq65 131 1e-24 seq134 109 4e-18 >seq79 Length=900310 Score = 152 bits (168), Expect = 3e-31 Identities = 555/852 (65%), Gaps = 30/852 (4%) Strand=Plus/Plus Query 475338 TCGAAGATGGTCTTTTCTCTGTAAGAGCAACAGCTGGAGATTCACATCTTGGTGGTGAAG 475397 |||| || ||| ||||| ||| | || || || || || | || | |||||||| | Sbjct 15123 TCGAGGACGGTATTTTCGATGTGAAGGCCACTGCCGGTGACACCCACTTAGGTGGTGAGG 15182 Query 475398 ATTTTGATAATAGACTTGT--ATCATGGTGTGTTGAAGATTTCAAGAGGAAAAATAA--- 475452 | ||||| | ||| | || | ||| | ||| || |||||||||||||| || Sbjct 15183 ACTTTGACCACAGATTGGTCAACCAT--TTTGTCACCGAGTTCAAGAGGAAAAACAAGAA 15240 Query 475453 --AGTTGATCTTTCAACATCTGCTAA-AGCATTAAGACGTCTTAGAACTGCTTGTGAACG 475509 | ||| || | ||| | || ||| | || | | || |||||||| ||||| Sbjct 15241 AGACTTG-TCCTCGAAC-----CAAAGAGCCATGAGGAGATTGAGGACTGCTTGCGAACG 15294 Query 475510 TGCTAAGCGAGCTCTTTCTTCTGCTACTCAAACTACTGTTGAAGTTGATTCTCTTTTTGA 475569 ||| ||| || | | || ||| || ||||||| || | ||| | || || | ||||| Sbjct 15295 TGCCAAGAGAACCTTGTCCTCTTCTGCTCAAACATCTATCGAAATAGACTCCTTGTTTGA 15354 Query 475570 AGGAATTGA-TTATAATACTCTTATTACAAGGGCTAAATTTGAAGATATTTGTTCTGATC 475628 || |||| || || ||| ||||| || || | ||| ||||| | ||| || Sbjct 15355 GGGCGTTGACTTCTACACCTCG-ATTACCAGAGCCAGATTCGAAGAGTTGTGTCACGACT 15413 Query 475629 TCTTTAGAAAAACAATTGAACCCGTTGAACAAGTTCTCAGAGATTCTAAACTTGACAAAT 475688 | || ||| || || || || || || ||||| | |||| |||| | ||||| | Sbjct 15414 TATTCAGATCTACCATGGACCCTGTGGAGAAAGTTTTGGGAGACGCTAAGATCGACAAGT 15473 Query 475689 CACAAGTCCATGAAATTGTTCTTGTAGGAGGTTCAACAAGAATTCCAAAAATA-AGAGAA 475747 | || || |||| |||||||| || || || ||||| ||||||||||| ||| ||| | Sbjct 15474 CCCAGGTGGATGAGATTGTTCTCGTGGGTGGCTCAACCAGAATTCCAAAGATACAGA-AG 15532 Query 475748 ATGCTTTCATCATATTTTAATGGTAAAAAGTTAAATGAAAGTGTAAATCCTGATGAAGCT 475807 || |||| || || ||||| || | || || | ||||||||||| || Sbjct 15533 TTGGTTTCGGACTACTTCAATGGGAAGGAACCAAGCAAATCCATCAATCCTGATGAGGCC 15592 Query 475808 GTTGCATATGGAGCTGCTGTCCAAGCAGCTATTTTATCAGGTCAATCAGACGAGAAACTA 475867 |||||||| || ||||| || || || ||||| || || || | | | ||| Sbjct 15593 GTTGCATACGGTGCTGCCGTACAGGCTGCTATCTTGTCCGGCGATACTTCCTCTAAAACC 15652 Query 475868 AATAATATTGTACTTGTT-GACGTAACTCCACTTTCATTAGGTCTTGAAACAGTTGGAGG 475926 | | |||| ||||| || || |||| | || || || ||||||| | ||||| Sbjct 15653 CAGGA-CTTGTTGTTGTTGGATGTGGCTCCCTTATCTTTGGGCATTGAAACCGCCGGAGG 15711 Query 475927 GATTATGACTAATCTTATTGACAGAAATACTCCTATCCCATGCAAAAAATCAAAAGTATT 475986 || |||||||| | ||| ||||| | | || || ||| || || | || Sbjct 15712 AATCATGACTAAGTTGATTCCTAGAAACTCGACCATTCCTGCCAAGAAGTCTGAGACGTT 15771 Query 475987 TTCCACTTATTCTGATAATCAAACAACTGTAACCATCCAAATCTTTGAAGGTGAAAGAAA 476046 || || || |||| || || || ||| || ||| | | |||||| || |||| Sbjct 15772 CTCAACGTACGCTGACAACCAGCCAGGTGTCTTGATTCAAGTTTATGAAGGCGAGAGAA- 15830 Query 476047 ATTCACTAAAGATAATAACAA--ACTTGG--AACTTTTAATCTTGAAGGTATTCCTCCTG 476102 || | | | ||||| |||| || || ||| | || ||||| |||| Sbjct 15831 --CCAAGACCGTGGACAACAATTTGTTGGGAAAATTCGAAT-TGTCCGGCATTCCACCTG 15887 Query 476103 CTCCCAGAGGAGTTCCTCAAATTGAAGTTACTTTTGATATTGATGCAAATGGTATTCTTA 476162 |||| ||||| || || ||| ||||||| || ||||||||||| || ||||| || | | Sbjct 15888 CTCCTAGAGGCGTACCCCAAGTTGAAGTCACGTTTGATATTGACGCCAATGGAATCTTGA 15947 Query 476163 ATGTTACTGCTT 476174 |||| |||||| Sbjct 15948 ATGTGTCTGCTT 15959 >seq65 Length=314791 Score = 131 bits (144), Expect = 1e-24 Identities = 400/600 (67%), Gaps = 25/600 (4%) Strand=Plus/Minus Query 474335 GGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTG-TTTGGCAAA--ATGGTAAAGTA 474391 ||||||||||||||||| || ||| |||||| || ||| | || || || || Sbjct 171401 GGTATTGATTTAGGAACAACCTACTCTTGTGTGGCCCATTTCTCGAACGATCGT---GTC 171345 Query 474392 GAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTACTGAA 474451 || || || ||||| ||||||||||| ||||| || ||||| | ||| |||| ||||| Sbjct 171344 GAGATTATCGCCAACGACCAAGGTAACAGAACCACCCCATCTTTCGTTGCTTTCACTGAC 171285 Query 474452 ACTGA-ACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAATAC 474510 |||| | || | || ||||||||||| || | || ||||| || || | || || Sbjct 171284 TCTGAGAGAT-TGATCGGAGATGCTGCCAAGAACCAGGCTGCCATGAACCCAGCCAACAC 171226 Query 474511 TATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAATCTGA 474570 | | ||||| || || ||| | || || | || |||||||| || || ||| ||| Sbjct 171225 TGTCTTTGACGCCAAGAGACTTATCGGAAGAAAGTTTGATGACTCCGACGTGCAAGGTGA 171166 Query 474571 TATGCGTCATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAACCATA-TATAGAAG--C 474627 | || | ||||| |||||||| || || | ||| | || ||| ||| Sbjct 171165 CCTCAAGCACTTCCCTTTCAAGGTGATCAA-CAAGGACGAAAAGCCTATTATCCAAGTCG 171107 Query 474628 AATACACGCAGGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTTTTAGC 474687 | | || | ||||| || ||| || | || || | || ||||| ||| | || | Sbjct 171106 AGTTCAAG--GGTGAGACCAAAACCTTCACTCCAGAGGAGATCTCTTCTATGATCTTGAC 171049 Query 474688 CAAAATGAAACAAACCG-CGAGCTCATATCTTGGACA-AGAAGTAACTGATGCAGTAATT 474745 ||| ||||| | |||| |||| || | |||||| | |||| ||||| || || | Sbjct 171048 CAAGATGAAGGAGACCGCCGAG-TC-TTTCTTGGGTACTCAAGTCACTGACGCCGTTGTC 170991 Query 474746 ACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATT 474805 || || ||||| || || || || || || | ||||| || || || || || ||| Sbjct 170990 ACCGTGCCAGCTTACTTCAACGACTCCCAGAGACAAGCCACCAAGGACGCTGGTTTGATT 170931 Query 474806 GCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGGT 474865 || || | || || | || || || || ||||| || || || ||||||| ||| Sbjct 170930 GCTGGCTTGAACGTCAAGAGAATCATCAACGAGCCAACCGCCGCTGCCATTGCTTACGGT 170871 Query 474866 CTTGATAAGAATTCTGACAA--AGAAGTAAATGTTTTAATCTTTGATT---GTGGAGGTA 474920 | || ||||| | || | ||||| || ||||| ||||| || | |||| |||| Sbjct 170870 TTGGACAAGAAGACCGAGGAGGAGAAG--AACGTTTTGATCTTCGACTTGGGTGGTGGTA 170813 >seq134 Length=667958 Score = 109 bits (120), Expect = 4e-18 Identities = 150/207 (72%), Gaps = 2/207 (1%) Strand=Plus/Minus Query 474332 ATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAAAGTA 474391 ||||||||||| || ||||| || ||| |||||| | || |||||||||||| || Sbjct 175862 ATTGGTATTGACTTGGGAACCACATACTCTTGTGTGGGAGTGATGCAAAATGGTAAGGTC 175803 Query 474392 GAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTACTGAA 474451 ||||| | ||||| || || ||| | |||| || || || |||||| |||| || || Sbjct 175802 GAAATCTTGGCCAACGATCAGGGTCACAGAATCACGCCGTCTTATGTTGCTTTCACCGAT 175743 Query 474452 ACTGA-ACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAATAC 474510 || | || | ||||| || |||||||| |||| |||||||| ||| | || || Sbjct 175742 CAGGAGAGAT-TGATTGGTGACGCTGCTAAGAATCAGGCTGCATCCAATGTTAACAACAC 175684 Query 474511 TATTTTTGATGCTAAAAGATTGATTGG 474537 | ||||| | || ||||||||||| Sbjct 175683 CGTCTTTGACGTCAAGAGATTGATTGG 175657 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3268172594192792