Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Metschnikowia_20australis_20[genbank_20GCA_5F002073855.1_202017-03-
29] 154 sequences; 14,350,841 total letters
Query= NC_021246.1
Length=281182
Score E
Sequences producing significant alignments: (Bits) Value
seq96 147 4e-30
seq79 118 2e-21
seq91 114 2e-20
>seq96
Length=44914
Score = 147 bits (162), Expect = 4e-30
Identities = 176/239 (74%), Gaps = 0/239 (0%)
Strand=Plus/Plus
Query 193125 ATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTA 193184
|||| ||||||||||| |||| || |||| ||||||||| | ||| || || ||
Sbjct 24 ATTTGCATACCACCTCTTAATCTGAGCACCAAATGCAATGTGGACTCCTTCTGGATGTTG 83
Query 193185 TAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGA 193244
|||||||| || ||||| || || ||||| || ||||| || || ||||| |||||
Sbjct 84 TAGTCGGACAATGTTCTGCCGTCCTCCAATTGCTTACCGGCGAAGATCAATCTTTGTTGG 143
Query 193245 TCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAA 193304
|| || || || || || |||||||| || |||| ||| | ||| ||| || || ||
Sbjct 144 TCTGGTGGAATGCCCTCCTTATCTTGAATCTTGGCTTTGACATTATCAATGGTGTCCGAG 203
Query 193305 GACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATTTT 193363
| ||| || || || || || || || || ||||| ||||| || || |||||||||||
Sbjct 204 GCCTCGACCTCGAGTGTGATTGTCTTTCCGGTTAGTGTTTTGACGAAGATTTGCATTTT 262
>seq79
Length=900310
Score = 118 bits (130), Expect = 2e-21
Identities = 163/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 193133 ACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGA 193192
|||||||||||||| || |||| |||||| || | ||| || || || ||||| ||
Sbjct 649556 ACCACCTCTCAATCTGAGGACCAAATGCAACGTGGACTCCTTCTGGATGTTGTAGTCAGA 649497
Query 193193 TAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGG 193252
|| ||||| || || || || || || || || || ||||| || || ||||| ||
Sbjct 649496 CAAGGTTCTGCCGTCCTCCAACTGCTTACCAGCGAAGATCAATCTTTGCTGGTCAGGTGG 649437
Query 193253 TATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAAC 193312
|||||||| || ||||| || |||| || | ||| || || ||||| | ||| ||
Sbjct 649436 AATTCCTTCCTTGTCTTGGATCTTGGCCTTGACATTGTCGATGGTGTCGGAGGCCTCGAC 649377
Query 193313 TTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
|| | ||| || || ||||| |||| || || || || ||||||||
Sbjct 649376 CTCCAAAGTGATGGTCTTACCCGTTAAGGTCTTGACGAAGATTTGCAT 649329
>seq91
Length=77570
Score = 114 bits (126), Expect = 2e-20
Identities = 140/191 (73%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 193125 ATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTA 193184
|||| ||||||||||| |||| || |||| ||||||||| | ||| || || ||
Sbjct 193 ATTTGCATACCACCTCTTAATCTGAGCACCAAATGCAATGTGGACTCCTTCTGGATGTTG 134
Query 193185 TAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGA 193244
|||||||| || ||||| || || ||||| || ||||| ||||| ||||| |||||
Sbjct 133 TAGTCGGACAATGTTCTGCCGTCCTCCAATTGCTTACCGGCGAAAATCAATCTTTGTTGG 74
Query 193245 TCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAA 193304
|| || || || || || |||||||| || |||| ||| | ||| ||| || || ||
Sbjct 73 TCTGGTGGAATGCCCTCCTTATCTTGAATCTTGGCTTTGACATTATCAATGGTGTCAGAG 14
Query 193305 GACTCAACTTC 193315
| ||| || ||
Sbjct 13 GCCTCGACCTC 3
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 899652668165280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |