Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Metschnikowia_20australis_20[genbank_20GCA_5F002073855.1_202017-03- 29] 154 sequences; 14,350,841 total letters Query= NC_021247.1 Length=228750 Score E Sequences producing significant alignments: (Bits) Value seq91 131 2e-25 seq96 123 4e-23 seq68 123 4e-23 seq79 84.2 3e-11 >seq91 Length=77570 Score = 131 bits (144), Expect = 2e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 |||||||| ||| | || || ||||| ||||| || || ||| | || ||||| | ||| Sbjct 414 ATGCAAATCTTTGTCAAGACCTTGACCGGAAAGACAATCACACTCGAGGTCGAGGCCTCT 473 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 || | ||| || || ||| || || |||||||| || ||||| || ||||| ||| Sbjct 474 GACACCATTGATAATGTCAAAGCCAAGATTCAAGATAAGGAGGGCATTCCACCAGACCAA 533 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 ||||||||||||| ||||||||||| | || || |||||| || || || || || Sbjct 534 CAAAGATTGATTTTCGCCGGTAAGCAATTGGAGGACGGCAGAACATTGTCTGACTACAAC 593 Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGG 156049 || || ||| | || | ||||| ||| | ||||| |||||||| Sbjct 594 ATCCAGAAGGAGTCCACATTGCATTTGGTGCTCAGATTGAGAGGCGG 640 Score = 114 bits (126), Expect = 2e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 |||||||| ||| | || || ||||| ||||| || || ||| | || ||||| | || Sbjct 186 ATGCAAATCTTTGTCAAGACCTTGACCGGAAAGACAATCACACTCGAGGTCGAGGCCTCG 245 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 || | ||| || || ||| || || |||||||| || ||||| || ||||| ||| Sbjct 246 GACACCATTGATAATGTCAAAGCCAAGATTCAAGATAAGGAGGGCATTCCACCAGACCAA 305 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 ||||||||||| | ||||||||||| | || || |||||| || || || || || Sbjct 306 CAAAGATTGATCTTCGCCGGTAAGCAATTGGAGGACGGCAGAACATTGTCCGACTACAAC 365 Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050 || || ||| | || | ||||| ||| | ||||| || || ||| Sbjct 366 ATCCAGAAGGAGTCCACATTGCATTTGGTGCTCAGATTGAGGGGTGGT 413 Score = 100 bits (110), Expect = 4e-16 Identities = 132/183 (72%), Gaps = 0/183 (0%) Strand=Plus/Plus Query 155868 GAAGTCGAAGATTCTGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGC 155927 || ||||| | ||||| | ||| || || ||| || || |||||||| || ||| Sbjct 3 GAGGTCGAGGCCTCTGACACCATTGATAATGTCAAAGCCAAGATTCAAGATAAGGAGGGC 62 Query 155928 ATACCTCCAGAACAACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACT 155987 || || ||||| |||||||||||||||| ||||||||||| | || || |||||| Sbjct 63 ATTCCACCAGACCAACAAAGATTGATTTTCGCCGGTAAGCAATTGGAGGACGGCAGAACA 122 Query 155988 TTATCAGATTATAATATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGC 156047 || || || || || || || ||| | || | ||||| ||| | ||||||||||| Sbjct 123 TTGTCCGACTACAACATCCAGAAGGAGTCCACATTGCATTTGGTGCTCAGATTAAGAGGT 182 Query 156048 GGT 156050 ||| Sbjct 183 GGT 185 >seq96 Length=44914 Score = 123 bits (136), Expect = 4e-23 Identities = 166/231 (72%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 155820 AAAATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGAT 155879 ||||||||||| || | |||||| | || ||||| || || ||| | || ||||| | Sbjct 262 AAAATGCAAATCTTCGTCAAAACACTAACCGGAAAGACAATCACACTCGAGGTCGAGGCC 203 Query 155880 TCTGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAA 155939 || || | ||| || || ||| || || |||||||| || ||||| || ||||| Sbjct 202 TCGGACACCATTGATAATGTCAAAGCCAAGATTCAAGATAAGGAGGGCATTCCACCAGAC 143 Query 155940 CAACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTAT 155999 |||||||||||||| | ||||||||||| | || || |||||| || || || || Sbjct 142 CAACAAAGATTGATCTTCGCCGGTAAGCAATTGGAGGACGGCAGAACATTGTCCGACTAC 83 Query 156000 AATATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050 || || || ||| | || | ||||| ||| | ||||||||||| ||| Sbjct 82 AACATCCAGAAGGAGTCCACATTGCATTTGGTGCTCAGATTAAGAGGTGGT 32 >seq68 Length=1116518 Score = 123 bits (136), Expect = 4e-23 Identities = 363/556 (65%), Gaps = 7/556 (1%) Strand=Plus/Minus Query 18152 AATAAACACGCAAAATCAGTGTGTAAACCTTCATCTCTGGATATTAATTCGTTACTAAAC 18211 || ||||| ||||| |||||||| || || || || | | | || || ||||| |||| Sbjct 368263 AACAAACAAGCAAAGTCAGTGTGCAAGCCCTCGTCACGGCAAATCAACTCGTTTGAAAAC 368204 Query 18212 GTTAACCCGGGCATTATACCTCttttttttAGCCAAAATATCGATGCGAAACTACTAGAA 18271 || | || ||||| | ||||| || |||| ||| || ||||| || || | || Sbjct 368203 GTGAGGCCAGGCATCAAGCCTCTCTTCTTTAACCAGAAGATCGAGGCAAATGAGCCTGAG 368144 Query 18272 AAGAATATACCCTCAACGCACGCGAACGCTATTAATCTTTCAGCAAAACTGTATTTATTG 18331 || || | |||||||||| ||||| || | ||||| || |||| | | || Sbjct 368143 AAAAAGACACCCTCAACGGCAGCGAAGGCAACCAATCTCTCGCCAAACAAGGCCTCCTTA 368084 Query 18332 CTCAGT-ATCCATTTTTGTGCCCATTCTCCTTNNNNNNNNATACACGGTATACTCTCTAT 18390 ||| | ||||| | ||||| || ||| ||||| || || | || || Sbjct 368083 -TCACTGATCCACCTCAAGGCCCAATCGGCTTTTTTCTTGATACATGGGATGTTGTCAAT 368025 Query 18391 AGCATTAAACAAATCATCTTTTTCTTTGGAATCTTTTATATAAGTGTCGATTAACAAAGA 18450 ||||||||||| || ||| |||| || || || || ||||| || ||||| || Sbjct 368024 TGCATTAAACAAGAAGTCGGATTCCTTGGGGTCCTTGATGTAGGTGTCAATCAACAAGGA 367965 Query 18451 ATACATTTCAGAATGTATGCTTTCCATAGCTATCTGAAAACTATAAAACGATCTAGCCTC 18510 || | || ||||| || | ||||| ||||| || | ||| || | | ||||| Sbjct 367964 GTAGGTCTCCGAATGAATATTCTCCATCATGATCTGGAATCCATAGAAGCACTTTGCCTC 367905 Query 18511 -GGGATATTGAATCTCGCTATAAAATCTTTCTACCAAATTCTCATTAACTATACCGTCAG 18569 ||||| || | |||| | |||| |||||||||| || || || || || ||||||| Sbjct 367904 AGGGAT-CTGCACCTCGGAAGAAAAGTTTTCTACCAAGTTTTCGTTGACGATTCCGTCAG 367846 Query 18570 CAGATGCGAAAAATGCCAAAACATATTTAATGAAATGTTTTTCATTATC---CTTGAGAT 18626 | || || || ||||| ||| |||||| | ||||| || | | | Sbjct 367845 AGGCAGCAAAGAAGGCCAACACACGCGAGATGAAAAACCTCTCATTGTCGGTCATTTTGT 367786 Query 18627 TGTTCCATTCATCTATATCTTTTGATAGATCAACTTCTTCCGATGTCCAAAAAGATGATT 18686 ||||||| || | || || || || | || | || || | ||||| ||||| | | Sbjct 367785 TGTTCCAGTCGTTGATGTCCTTGGACAAGTCGATCTCCTCGGCGGTCCAGAAAGACGCCT 367726 Query 18687 CGGCCTGTTTGTACAT 18702 |||| | |||||||| Sbjct 367725 CGGCTTTCTTGTACAT 367710 >seq79 Length=900310 Score = 84.2 bits (92), Expect = 3e-11 Identities = 156/229 (68%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 |||||||| || | || || || || || || || || || || || ||||| | || Sbjct 649329 ATGCAAATCTTCGTCAAGACCTTAACGGGTAAGACCATCACTTTGGAGGTCGAGGCCTCC 649388 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 || | || || || || || || ||||| || ||||| || || || || || Sbjct 649389 GACACCATCGACAATGTCAAGGCCAAGATCCAAGACAAGGAAGGAATTCCACCTGACCAG 649448 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 ||||||||||| | || ||||||||| | || || |||||| || || || || || Sbjct 649449 CAAAGATTGATCTTCGCTGGTAAGCAGTTGGAGGACGGCAGAACCTTGTCTGACTACAAC 649508 Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGTG 156051 || || ||| | ||| | ||||| || | ||||| ||||| |||| Sbjct 649509 ATCCAGAAGGAGTCCACGTTGCATTTGGTCCTCAGATTGAGAGGTGGTG 649557 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 731870591146400