Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Metschnikowia_20australis_20[genbank_20GCA_5F002073855.1_202017-03-
29] 154 sequences; 14,350,841 total letters
Query= NC_021247.1
Length=228750
Score E
Sequences producing significant alignments: (Bits) Value
seq91 131 2e-25
seq96 123 4e-23
seq68 123 4e-23
seq79 84.2 3e-11
>seq91
Length=77570
Score = 131 bits (144), Expect = 2e-25
Identities = 165/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882
|||||||| ||| | || || ||||| ||||| || || ||| | || ||||| | |||
Sbjct 414 ATGCAAATCTTTGTCAAGACCTTGACCGGAAAGACAATCACACTCGAGGTCGAGGCCTCT 473
Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942
|| | ||| || || ||| || || |||||||| || ||||| || ||||| |||
Sbjct 474 GACACCATTGATAATGTCAAAGCCAAGATTCAAGATAAGGAGGGCATTCCACCAGACCAA 533
Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002
||||||||||||| ||||||||||| | || || |||||| || || || || ||
Sbjct 534 CAAAGATTGATTTTCGCCGGTAAGCAATTGGAGGACGGCAGAACATTGTCTGACTACAAC 593
Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGG 156049
|| || ||| | || | ||||| ||| | ||||| ||||||||
Sbjct 594 ATCCAGAAGGAGTCCACATTGCATTTGGTGCTCAGATTGAGAGGCGG 640
Score = 114 bits (126), Expect = 2e-20
Identities = 162/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882
|||||||| ||| | || || ||||| ||||| || || ||| | || ||||| | ||
Sbjct 186 ATGCAAATCTTTGTCAAGACCTTGACCGGAAAGACAATCACACTCGAGGTCGAGGCCTCG 245
Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942
|| | ||| || || ||| || || |||||||| || ||||| || ||||| |||
Sbjct 246 GACACCATTGATAATGTCAAAGCCAAGATTCAAGATAAGGAGGGCATTCCACCAGACCAA 305
Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002
||||||||||| | ||||||||||| | || || |||||| || || || || ||
Sbjct 306 CAAAGATTGATCTTCGCCGGTAAGCAATTGGAGGACGGCAGAACATTGTCCGACTACAAC 365
Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050
|| || ||| | || | ||||| ||| | ||||| || || |||
Sbjct 366 ATCCAGAAGGAGTCCACATTGCATTTGGTGCTCAGATTGAGGGGTGGT 413
Score = 100 bits (110), Expect = 4e-16
Identities = 132/183 (72%), Gaps = 0/183 (0%)
Strand=Plus/Plus
Query 155868 GAAGTCGAAGATTCTGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGC 155927
|| ||||| | ||||| | ||| || || ||| || || |||||||| || |||
Sbjct 3 GAGGTCGAGGCCTCTGACACCATTGATAATGTCAAAGCCAAGATTCAAGATAAGGAGGGC 62
Query 155928 ATACCTCCAGAACAACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACT 155987
|| || ||||| |||||||||||||||| ||||||||||| | || || ||||||
Sbjct 63 ATTCCACCAGACCAACAAAGATTGATTTTCGCCGGTAAGCAATTGGAGGACGGCAGAACA 122
Query 155988 TTATCAGATTATAATATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGC 156047
|| || || || || || || ||| | || | ||||| ||| | |||||||||||
Sbjct 123 TTGTCCGACTACAACATCCAGAAGGAGTCCACATTGCATTTGGTGCTCAGATTAAGAGGT 182
Query 156048 GGT 156050
|||
Sbjct 183 GGT 185
>seq96
Length=44914
Score = 123 bits (136), Expect = 4e-23
Identities = 166/231 (72%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 155820 AAAATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGAT 155879
||||||||||| || | |||||| | || ||||| || || ||| | || ||||| |
Sbjct 262 AAAATGCAAATCTTCGTCAAAACACTAACCGGAAAGACAATCACACTCGAGGTCGAGGCC 203
Query 155880 TCTGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAA 155939
|| || | ||| || || ||| || || |||||||| || ||||| || |||||
Sbjct 202 TCGGACACCATTGATAATGTCAAAGCCAAGATTCAAGATAAGGAGGGCATTCCACCAGAC 143
Query 155940 CAACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTAT 155999
|||||||||||||| | ||||||||||| | || || |||||| || || || ||
Sbjct 142 CAACAAAGATTGATCTTCGCCGGTAAGCAATTGGAGGACGGCAGAACATTGTCCGACTAC 83
Query 156000 AATATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050
|| || || ||| | || | ||||| ||| | ||||||||||| |||
Sbjct 82 AACATCCAGAAGGAGTCCACATTGCATTTGGTGCTCAGATTAAGAGGTGGT 32
>seq68
Length=1116518
Score = 123 bits (136), Expect = 4e-23
Identities = 363/556 (65%), Gaps = 7/556 (1%)
Strand=Plus/Minus
Query 18152 AATAAACACGCAAAATCAGTGTGTAAACCTTCATCTCTGGATATTAATTCGTTACTAAAC 18211
|| ||||| ||||| |||||||| || || || || | | | || || ||||| ||||
Sbjct 368263 AACAAACAAGCAAAGTCAGTGTGCAAGCCCTCGTCACGGCAAATCAACTCGTTTGAAAAC 368204
Query 18212 GTTAACCCGGGCATTATACCTCttttttttAGCCAAAATATCGATGCGAAACTACTAGAA 18271
|| | || ||||| | ||||| || |||| ||| || ||||| || || | ||
Sbjct 368203 GTGAGGCCAGGCATCAAGCCTCTCTTCTTTAACCAGAAGATCGAGGCAAATGAGCCTGAG 368144
Query 18272 AAGAATATACCCTCAACGCACGCGAACGCTATTAATCTTTCAGCAAAACTGTATTTATTG 18331
|| || | |||||||||| ||||| || | ||||| || |||| | | ||
Sbjct 368143 AAAAAGACACCCTCAACGGCAGCGAAGGCAACCAATCTCTCGCCAAACAAGGCCTCCTTA 368084
Query 18332 CTCAGT-ATCCATTTTTGTGCCCATTCTCCTTNNNNNNNNATACACGGTATACTCTCTAT 18390
||| | ||||| | ||||| || ||| ||||| || || | || ||
Sbjct 368083 -TCACTGATCCACCTCAAGGCCCAATCGGCTTTTTTCTTGATACATGGGATGTTGTCAAT 368025
Query 18391 AGCATTAAACAAATCATCTTTTTCTTTGGAATCTTTTATATAAGTGTCGATTAACAAAGA 18450
||||||||||| || ||| |||| || || || || ||||| || ||||| ||
Sbjct 368024 TGCATTAAACAAGAAGTCGGATTCCTTGGGGTCCTTGATGTAGGTGTCAATCAACAAGGA 367965
Query 18451 ATACATTTCAGAATGTATGCTTTCCATAGCTATCTGAAAACTATAAAACGATCTAGCCTC 18510
|| | || ||||| || | ||||| ||||| || | ||| || | | |||||
Sbjct 367964 GTAGGTCTCCGAATGAATATTCTCCATCATGATCTGGAATCCATAGAAGCACTTTGCCTC 367905
Query 18511 -GGGATATTGAATCTCGCTATAAAATCTTTCTACCAAATTCTCATTAACTATACCGTCAG 18569
||||| || | |||| | |||| |||||||||| || || || || || |||||||
Sbjct 367904 AGGGAT-CTGCACCTCGGAAGAAAAGTTTTCTACCAAGTTTTCGTTGACGATTCCGTCAG 367846
Query 18570 CAGATGCGAAAAATGCCAAAACATATTTAATGAAATGTTTTTCATTATC---CTTGAGAT 18626
| || || || ||||| ||| |||||| | ||||| || | | |
Sbjct 367845 AGGCAGCAAAGAAGGCCAACACACGCGAGATGAAAAACCTCTCATTGTCGGTCATTTTGT 367786
Query 18627 TGTTCCATTCATCTATATCTTTTGATAGATCAACTTCTTCCGATGTCCAAAAAGATGATT 18686
||||||| || | || || || || | || | || || | ||||| ||||| | |
Sbjct 367785 TGTTCCAGTCGTTGATGTCCTTGGACAAGTCGATCTCCTCGGCGGTCCAGAAAGACGCCT 367726
Query 18687 CGGCCTGTTTGTACAT 18702
|||| | ||||||||
Sbjct 367725 CGGCTTTCTTGTACAT 367710
>seq79
Length=900310
Score = 84.2 bits (92), Expect = 3e-11
Identities = 156/229 (68%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882
|||||||| || | || || || || || || || || || || || ||||| | ||
Sbjct 649329 ATGCAAATCTTCGTCAAGACCTTAACGGGTAAGACCATCACTTTGGAGGTCGAGGCCTCC 649388
Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942
|| | || || || || || || ||||| || ||||| || || || || ||
Sbjct 649389 GACACCATCGACAATGTCAAGGCCAAGATCCAAGACAAGGAAGGAATTCCACCTGACCAG 649448
Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002
||||||||||| | || ||||||||| | || || |||||| || || || || ||
Sbjct 649449 CAAAGATTGATCTTCGCTGGTAAGCAGTTGGAGGACGGCAGAACCTTGTCTGACTACAAC 649508
Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGTG 156051
|| || ||| | ||| | ||||| || | ||||| ||||| ||||
Sbjct 649509 ATCCAGAAGGAGTCCACGTTGCATTTGGTCCTCAGATTGAGAGGTGGTG 649557
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 731870591146400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |