Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Metschnikowia_20australis_20[genbank_20GCA_5F002073855.1_202017-03- 29] 154 sequences; 14,350,841 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq108 109 2e-18 seq112 89.7 2e-12 >seq108 Length=6510 Score = 109 bits (120), Expect = 2e-18 Identities = 198/290 (68%), Gaps = 0/290 (0%) Strand=Plus/Minus Query 302554 TCATAACCAATCATAATGTCTTCCATACTCTTGATTAAACGACGCTGAATATAACCAGTT 302613 ||||| || ||| || || |||| ||| | |||||||||||| || || ||||| Sbjct 4286 TCATAGTGAACCATGATATCCTCCAACGCCTTAACTAAACGACGCTGGATGTATCCAGTC 4227 Query 302614 GTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAAT 302673 | || || || || |||||||| ||||| | | || |||| ||||||||||| Sbjct 4226 TCTGCAGTCTTCACGGCCGTATCAATAAGACCCTCTCTTCCTGCCATCGCATGGAAGAAA 4167 Query 302674 AGCTCTTCCGGTCGTAGCCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGGC 302733 | ||||| ||| | || | | | | ||| | ||||||||||| | || ||| Sbjct 4166 AACTCTTGAGGTGTCAAACCTCTGAGATACGAGTTTTCAACGAAACCCTTAGATTCTGGC 4107 Query 302734 GAATCGTCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGC 302793 |||| ||| ||||||||| ||||| || || | || | | ||| |||| |||||| Sbjct 4106 GAATAGTCATCCTTGGTAAAATGTGGTAGCGTACGGTCACCGAAACCGAATGGAATACGC 4047 Query 302794 TTTCCATCAACGTTCTGCTGTCCCAGGCACGAAATCATCTGCGAAATATT 302843 || || || || | ||||| |||| || | ||| || |||||||| Sbjct 4046 TTACCCTCGACAATTTGCTGACCCACACATGCCGACATTTGAGAAATATT 3997 >seq112 Length=679525 Score = 89.7 bits (98), Expect = 2e-12 Identities = 219/326 (67%), Gaps = 6/326 (2%) Strand=Plus/Plus Query 289021 CtttttttACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTC 289080 |||| ||| |||| ||||| ||||| |||| ||| || | | |||| ||| || Sbjct 471639 CTTTCTTTTCCAATTGCATCGATTTCATCAACGAAGATGATCGAGGGAGCCATTTCCCTT 471698 Query 289081 GCAATTGCAAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAAT 289140 || || ||| | || | |||||||| || || | ||| || ||||||| |||||| Sbjct 471699 GCGGTTTTAAAGAGATCACGCACACGGGAAGCACCTACACCCACGAACATTTCCACAAAT 471758 Query 289141 TCAGAAGCGGATACTTGAATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGA 289200 |||||| | || || | ||| | ||| || || ||||| || | |||| | Sbjct 471759 TCAGAACCAGAGACAGACAAGAAAGGAACACCAGCCTCACCTGCAGTGGCTTTGGCCAAA 471818 Query 289201 AGTGTCTTACCTGTTCCAGGTGGTCCCTCTAATAGAACTCCCTTTGGTACTTTTGCCCCA 289260 || |||||||||||||| || || ||| | | | | || | || | ||| || ||| Sbjct 471819 AGAGTCTTACCTGTTCCGGGAGGACCCGAGAGAATAGCACCTCTGGGGATTTTAGCACCA 471878 Query 289261 GCAGACTTATATTTC-TCA-GGGCTCTT-TAAAAATTCTACAATTTCCTCAAGTTCATAT 289317 || ||| | | | ||| |||||||| |||||||| |||| ||| | ||| | Sbjct 471879 --AG-CTTTTCGTACTTCATGGGCTCTTGTAAAAATTTAACAAACTCCATGATTTCTTCC 471935 Query 289318 TTTGCCTCATCACATCCTGCTACATC 289343 || | ||| ||||| || || ||||| Sbjct 471936 TTAGACTCTTCACAACCAGCAACATC 471961 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471814695919898