Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Metschnikowia_20australis_20[genbank_20GCA_5F002073855.1_202017-03-
29] 154 sequences; 14,350,841 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq108 109 2e-18
seq112 89.7 2e-12
>seq108
Length=6510
Score = 109 bits (120), Expect = 2e-18
Identities = 198/290 (68%), Gaps = 0/290 (0%)
Strand=Plus/Minus
Query 302554 TCATAACCAATCATAATGTCTTCCATACTCTTGATTAAACGACGCTGAATATAACCAGTT 302613
||||| || ||| || || |||| ||| | |||||||||||| || || |||||
Sbjct 4286 TCATAGTGAACCATGATATCCTCCAACGCCTTAACTAAACGACGCTGGATGTATCCAGTC 4227
Query 302614 GTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAAT 302673
| || || || || |||||||| ||||| | | || |||| |||||||||||
Sbjct 4226 TCTGCAGTCTTCACGGCCGTATCAATAAGACCCTCTCTTCCTGCCATCGCATGGAAGAAA 4167
Query 302674 AGCTCTTCCGGTCGTAGCCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGGC 302733
| ||||| ||| | || | | | | ||| | ||||||||||| | || |||
Sbjct 4166 AACTCTTGAGGTGTCAAACCTCTGAGATACGAGTTTTCAACGAAACCCTTAGATTCTGGC 4107
Query 302734 GAATCGTCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGC 302793
|||| ||| ||||||||| ||||| || || | || | | ||| |||| ||||||
Sbjct 4106 GAATAGTCATCCTTGGTAAAATGTGGTAGCGTACGGTCACCGAAACCGAATGGAATACGC 4047
Query 302794 TTTCCATCAACGTTCTGCTGTCCCAGGCACGAAATCATCTGCGAAATATT 302843
|| || || || | ||||| |||| || | ||| || ||||||||
Sbjct 4046 TTACCCTCGACAATTTGCTGACCCACACATGCCGACATTTGAGAAATATT 3997
>seq112
Length=679525
Score = 89.7 bits (98), Expect = 2e-12
Identities = 219/326 (67%), Gaps = 6/326 (2%)
Strand=Plus/Plus
Query 289021 CtttttttACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTC 289080
|||| ||| |||| ||||| ||||| |||| ||| || | | |||| ||| ||
Sbjct 471639 CTTTCTTTTCCAATTGCATCGATTTCATCAACGAAGATGATCGAGGGAGCCATTTCCCTT 471698
Query 289081 GCAATTGCAAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAAT 289140
|| || ||| | || | |||||||| || || | ||| || ||||||| ||||||
Sbjct 471699 GCGGTTTTAAAGAGATCACGCACACGGGAAGCACCTACACCCACGAACATTTCCACAAAT 471758
Query 289141 TCAGAAGCGGATACTTGAATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGA 289200
|||||| | || || | ||| | ||| || || ||||| || | |||| |
Sbjct 471759 TCAGAACCAGAGACAGACAAGAAAGGAACACCAGCCTCACCTGCAGTGGCTTTGGCCAAA 471818
Query 289201 AGTGTCTTACCTGTTCCAGGTGGTCCCTCTAATAGAACTCCCTTTGGTACTTTTGCCCCA 289260
|| |||||||||||||| || || ||| | | | | || | || | ||| || |||
Sbjct 471819 AGAGTCTTACCTGTTCCGGGAGGACCCGAGAGAATAGCACCTCTGGGGATTTTAGCACCA 471878
Query 289261 GCAGACTTATATTTC-TCA-GGGCTCTT-TAAAAATTCTACAATTTCCTCAAGTTCATAT 289317
|| ||| | | | ||| |||||||| |||||||| |||| ||| | ||| |
Sbjct 471879 --AG-CTTTTCGTACTTCATGGGCTCTTGTAAAAATTTAACAAACTCCATGATTTCTTCC 471935
Query 289318 TTTGCCTCATCACATCCTGCTACATC 289343
|| | ||| ||||| || || |||||
Sbjct 471936 TTAGACTCTTCACAACCAGCAACATC 471961
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1471814695919898
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |