Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Metschnikowia_20australis_20[genbank_20GCA_5F002073855.1_202017-03-
29] 154 sequences; 14,350,841 total letters
Query= NC_021858.1
Length=1908524
Score E
Sequences producing significant alignments: (Bits) Value
seq21 201 1e-45
seq73 179 5e-39
seq64 143 3e-28
>seq21
Length=540240
Score = 201 bits (222), Expect = 1e-45
Identities = 296/417 (71%), Gaps = 8/417 (2%)
Strand=Plus/Plus
Query 18070 TTCGGCAAGGTATTTAGGGTCACCACCTTTGGCGAGTCGCACGGGGCGGGCGTCGGCTGC 18129
|||||||| | || | || ||||||| |||||||| ||| | | ||||| |||
Sbjct 90414 TTCGGCAACATTTTCCGCGTGACCACCTACGGCGAGTCCCACTGCAAGTCGGTCGGGTGC 90473
Query 18130 ATCATCGACGGCGTGCCGCCGTGCATGCCAC----TGGCCGAGGCCGACATCCAGCCTCA 18185
|||||||||||| |||| || || | | | || | ||||||||||||||||| ||
Sbjct 90474 ATCATCGACGGC-TGCCCCC---CAGGGCTCGAGTTGACGGAGGCCGACATCCAGCCCCA 90529
Query 18186 GTTGGATCGGCGCCGACCGGGCCAGGGCGCACTTTCCACGCCGCGCAACGAGCCCGATCG 18245
|||| | | |||| |||||| ||| ||||||||||| || ||||| ||
Sbjct 90530 GTTGAGCAGAAGAAGACCCGGCCAGTCCGCGCTTTCCACGCCCCGGAACGAAAAGGACAA 90589
Query 18246 CGTCATCATCCAGTCGGGCACGGAGAACGGCCTCACGCTCGGCTCGCCCGTCGGCCTCTT 18305
|| ||||||||| || || ||| |||||| |||||||||||||||| ||||| | ||
Sbjct 90590 GGTGCACATCCAGTCTGGAACCGAGCACGGCCGCACGCTCGGCTCGCCCATCGGCATGTT 90649
Query 18306 TGTGGCCAACCGCGACCAGCGGCCCGTCGACTATTCCGACATGTGCAAGGTGCCGCGGCC 18365
||| ||| ||||| |||||| ||||| || || | | | ||| | ||
Sbjct 90650 GGTGTTGAACGAGGACCACCGGCCCAAGGACTACTCGGAAACCGACTTGTACCCGAGACC 90709
Query 18366 CTCACACGCCGACTACACCTACATGGCCAAGTACGGCATCAAGGCGTCGTCGGGCGGAGG 18425
|| ||||| |||||||| ||||| ||||||||| ||||| | |||| || || ||
Sbjct 90710 GTCGCACGCAGACTACACGTACATCCAGAAGTACGGCGTCAAGTCCGCGTCAGGTGGCGG 90769
Query 18426 CCGGTCGTCTGCCCGCGAGACCCTCATGCGCGTCGCCGCCGGCGCGGTCGCCGAGAA 18482
||| || || ||| | || || || ||||| ||||||||||| | ||||||||
Sbjct 90770 CCGCTCTTCGGCCAGGGAAACTATCGGCCGCGTGGCCGCCGGCGCCATAGCCGAGAA 90826
Score = 95.1 bits (104), Expect = 1e-13
Identities = 105/140 (75%), Gaps = 0/140 (0%)
Strand=Plus/Plus
Query 19053 ATCGGCGGCACGGTGACGTGCGTGTGTCGCAACGTGCCGGCAGGCCTCGGCGAGCCGTGC 19112
|||||||| ||| || |||||| || ||| || | ||| | ||||||||||||
Sbjct 91047 ATCGGCGGTGTGGTCACATGCGTGATCCGGAACTGCCCCGTGGGCTTGGGCGAGCCGTGC 91106
Query 19113 TTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCGATCCCGGCCACCAAGGGA 19172
|| |||||| |||||||| || | || ||||||||| ||||||| || || || |||||
Sbjct 91107 TTCGACAAGCTCGAGGCCACGTTGGCGCACGCCATGATGTCGATACCTGCGACGAAGGGC 91166
Query 19173 TTCGAGATTGGCAGCGGGTT 19192
|| ||| | ||| ||| ||
Sbjct 91167 TTTGAGTTCGGCTCCGGCTT 91186
>seq73
Length=169253
Score = 179 bits (198), Expect = 5e-39
Identities = 324/471 (69%), Gaps = 17/471 (4%)
Strand=Plus/Minus
Query 1630065 CTGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGA 1630124
|||||| || || || || || | ||| ||||| || | ||| || | || ||||||||
Sbjct 116450 CTGGTCAACATAACGTGCGGTATTGTTGAAGACACGCACCATAGGAATGATACCGTTGGA 116391
Query 1630125 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAAGCC 1630184
| |||||||| || || | |||||| |||| || | | ||||| | |||||
Sbjct 116390 CGTTCCGTTGGTACCAGCAATGTAGGCTCCGGTGGACCTGATGTTGTGTATGTGCAAGCC 116331
Query 1630185 GATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCCCTC 1630244
|| |||||||| || |||||||| | || || || | ||||||||||| || ||
Sbjct 116330 AATACCGCCGGCAGATTTGGAGATCAAGGCACAGGTCTTCAAGGTGTCGTAGATTCCGTC 116271
Query 1630245 GATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGTGCC 1630304
||| |||||| |||||||| | ||||| || |||||||| |||| ||| | ||||||
Sbjct 116270 GATGGAGTCGTCCTTCATGGCGACGAGGAAACACGACGACATTTGGGGGCTTGGCGTGCC 116211
Query 1630305 GGCGTTGAAGAGCGTGGGCGTCGCCGCG-GTGAACAACTGCCGCGACATGGCGTCGTAGG 1630363
|||||||| |||||||| | |||| | ||||| | || ||||||| || ||| |
Sbjct 116210 TGCGTTGAAAAGCGTGGG-GGAGCCGTGCGTGAAGTAGCGCAGCGACATCATGTTGTAAG 116152
Query 1630364 TGGCGAGCACGCGCGCCAGCGCATCGTCCACGTCGGCAAACCCATAGTGGCCGATGGCGA 1630423
| ||| || || | | || |||| | || | | ||| | ||||
Sbjct 116151 TCTCGATGACACG-----GGGAAT-GTCCCTG---------CCGTGGATGCCCACTGCGA 116107
Query 1630424 CGCGCATGAGCATGTACTGGGGCCGCTCGACGACGACGCCGCGCACCTTGGTCAGGTAGG 1630483
| ||||| |||| || ||| |||| |||| ||||| |||| ||| ||| || ||| |
Sbjct 116106 CACGCATAAGCAAGTGCTGCGGCCTCTCGGCGACGCTGCCGTTCACTTTGAGCAAGTACG 116047
Query 1630484 ACCGGCGCATGGTCATGAGGCCAAAGTAGGAAAAGGCAAAATCGCGGTCGT 1630534
|||| || |||| ||| |||||| || || || ||||||||||
Sbjct 116046 ACCGTTCCAAGGTCTTGAATCCAAAGAAGTTGTAGTTGAAGTCGCGGTCGT 115996
>seq64
Length=319606
Score = 143 bits (158), Expect = 3e-28
Identities = 187/259 (72%), Gaps = 0/259 (0%)
Strand=Plus/Plus
Query 1573980 GAACTCAACGCGTCGGACGAGCGCGGCGTCGACGTCGTGCGCAAGATCATCAAGCACCAC 1574039
||| | ||||| |||||||| || ||| |||| || ||| | || | ||||||||
Sbjct 9467 GAATTGAACGCCTCGGACGACCGAGGCATCGATGTGGTGAGGAACAAAATCAAGCAGTTT 9526
Query 1574040 GCCTCCAAGAGGATCGACCTGCCGCCCGGACGCCACAAGGTGATCATCCTCGACGAGGCC 1574099
|| | | |||| ||||||| || |||||||| | ||||| | ||||||||
Sbjct 9527 GCGCAGACCAAGATCCTGTTGCCGCCGGGCCGCCACAAAATCATCATTTTGGACGAGGCG 9586
Query 1574100 GACTGCCTCACGTCGGCGGCCCAGCAGGCCCTGCGGTCCACCATGGAAAAGCACACCAAC 1574159
|||| | | ||| ||| |||||||||||| |||| ||| ||||| | || |||||
Sbjct 9587 GACTCCATGACGCCGGGCGCCCAGCAGGCCTTGCGCCGCACAATGGAGTTGTACTCCAAC 9646
Query 1574160 ACGACGCGCTTTGCCCTGGCGTGCAACACGTCGTCGATGGTCATCGAGGCCCTCCAAAGT 1574219
|| ||||| ||||| | ||||||||| |||||||| |||||||| | |||||
Sbjct 9647 ACCACGCGGTTTGCGTTTGCGTGCAACCAGTCGTCGAAAATCATCGAGCCACTCCAGCTG 9706
Query 1574220 CGCTGCGCCATTCTGCGCT 1574238
| ||||||||| ||||||
Sbjct 9707 AGATGCGCCATTTTGCGCT 9725
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 6107126562038818
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |