Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Metschnikowia_20australis_20[genbank_20GCA_5F002073855.1_202017-03- 29] 154 sequences; 14,350,841 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq21 201 1e-45 seq73 179 5e-39 seq64 143 3e-28 >seq21 Length=540240 Score = 201 bits (222), Expect = 1e-45 Identities = 296/417 (71%), Gaps = 8/417 (2%) Strand=Plus/Plus Query 18070 TTCGGCAAGGTATTTAGGGTCACCACCTTTGGCGAGTCGCACGGGGCGGGCGTCGGCTGC 18129 |||||||| | || | || ||||||| |||||||| ||| | | ||||| ||| Sbjct 90414 TTCGGCAACATTTTCCGCGTGACCACCTACGGCGAGTCCCACTGCAAGTCGGTCGGGTGC 90473 Query 18130 ATCATCGACGGCGTGCCGCCGTGCATGCCAC----TGGCCGAGGCCGACATCCAGCCTCA 18185 |||||||||||| |||| || || | | | || | ||||||||||||||||| || Sbjct 90474 ATCATCGACGGC-TGCCCCC---CAGGGCTCGAGTTGACGGAGGCCGACATCCAGCCCCA 90529 Query 18186 GTTGGATCGGCGCCGACCGGGCCAGGGCGCACTTTCCACGCCGCGCAACGAGCCCGATCG 18245 |||| | | |||| |||||| ||| ||||||||||| || ||||| || Sbjct 90530 GTTGAGCAGAAGAAGACCCGGCCAGTCCGCGCTTTCCACGCCCCGGAACGAAAAGGACAA 90589 Query 18246 CGTCATCATCCAGTCGGGCACGGAGAACGGCCTCACGCTCGGCTCGCCCGTCGGCCTCTT 18305 || ||||||||| || || ||| |||||| |||||||||||||||| ||||| | || Sbjct 90590 GGTGCACATCCAGTCTGGAACCGAGCACGGCCGCACGCTCGGCTCGCCCATCGGCATGTT 90649 Query 18306 TGTGGCCAACCGCGACCAGCGGCCCGTCGACTATTCCGACATGTGCAAGGTGCCGCGGCC 18365 ||| ||| ||||| |||||| ||||| || || | | | ||| | || Sbjct 90650 GGTGTTGAACGAGGACCACCGGCCCAAGGACTACTCGGAAACCGACTTGTACCCGAGACC 90709 Query 18366 CTCACACGCCGACTACACCTACATGGCCAAGTACGGCATCAAGGCGTCGTCGGGCGGAGG 18425 || ||||| |||||||| ||||| ||||||||| ||||| | |||| || || || Sbjct 90710 GTCGCACGCAGACTACACGTACATCCAGAAGTACGGCGTCAAGTCCGCGTCAGGTGGCGG 90769 Query 18426 CCGGTCGTCTGCCCGCGAGACCCTCATGCGCGTCGCCGCCGGCGCGGTCGCCGAGAA 18482 ||| || || ||| | || || || ||||| ||||||||||| | |||||||| Sbjct 90770 CCGCTCTTCGGCCAGGGAAACTATCGGCCGCGTGGCCGCCGGCGCCATAGCCGAGAA 90826 Score = 95.1 bits (104), Expect = 1e-13 Identities = 105/140 (75%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 19053 ATCGGCGGCACGGTGACGTGCGTGTGTCGCAACGTGCCGGCAGGCCTCGGCGAGCCGTGC 19112 |||||||| ||| || |||||| || ||| || | ||| | |||||||||||| Sbjct 91047 ATCGGCGGTGTGGTCACATGCGTGATCCGGAACTGCCCCGTGGGCTTGGGCGAGCCGTGC 91106 Query 19113 TTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCGATCCCGGCCACCAAGGGA 19172 || |||||| |||||||| || | || ||||||||| ||||||| || || || ||||| Sbjct 91107 TTCGACAAGCTCGAGGCCACGTTGGCGCACGCCATGATGTCGATACCTGCGACGAAGGGC 91166 Query 19173 TTCGAGATTGGCAGCGGGTT 19192 || ||| | ||| ||| || Sbjct 91167 TTTGAGTTCGGCTCCGGCTT 91186 >seq73 Length=169253 Score = 179 bits (198), Expect = 5e-39 Identities = 324/471 (69%), Gaps = 17/471 (4%) Strand=Plus/Minus Query 1630065 CTGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGA 1630124 |||||| || || || || || | ||| ||||| || | ||| || | || |||||||| Sbjct 116450 CTGGTCAACATAACGTGCGGTATTGTTGAAGACACGCACCATAGGAATGATACCGTTGGA 116391 Query 1630125 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAAGCC 1630184 | |||||||| || || | |||||| |||| || | | ||||| | ||||| Sbjct 116390 CGTTCCGTTGGTACCAGCAATGTAGGCTCCGGTGGACCTGATGTTGTGTATGTGCAAGCC 116331 Query 1630185 GATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCCCTC 1630244 || |||||||| || |||||||| | || || || | ||||||||||| || || Sbjct 116330 AATACCGCCGGCAGATTTGGAGATCAAGGCACAGGTCTTCAAGGTGTCGTAGATTCCGTC 116271 Query 1630245 GATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGTGCC 1630304 ||| |||||| |||||||| | ||||| || |||||||| |||| ||| | |||||| Sbjct 116270 GATGGAGTCGTCCTTCATGGCGACGAGGAAACACGACGACATTTGGGGGCTTGGCGTGCC 116211 Query 1630305 GGCGTTGAAGAGCGTGGGCGTCGCCGCG-GTGAACAACTGCCGCGACATGGCGTCGTAGG 1630363 |||||||| |||||||| | |||| | ||||| | || ||||||| || ||| | Sbjct 116210 TGCGTTGAAAAGCGTGGG-GGAGCCGTGCGTGAAGTAGCGCAGCGACATCATGTTGTAAG 116152 Query 1630364 TGGCGAGCACGCGCGCCAGCGCATCGTCCACGTCGGCAAACCCATAGTGGCCGATGGCGA 1630423 | ||| || || | | || |||| | || | | ||| | |||| Sbjct 116151 TCTCGATGACACG-----GGGAAT-GTCCCTG---------CCGTGGATGCCCACTGCGA 116107 Query 1630424 CGCGCATGAGCATGTACTGGGGCCGCTCGACGACGACGCCGCGCACCTTGGTCAGGTAGG 1630483 | ||||| |||| || ||| |||| |||| ||||| |||| ||| ||| || ||| | Sbjct 116106 CACGCATAAGCAAGTGCTGCGGCCTCTCGGCGACGCTGCCGTTCACTTTGAGCAAGTACG 116047 Query 1630484 ACCGGCGCATGGTCATGAGGCCAAAGTAGGAAAAGGCAAAATCGCGGTCGT 1630534 |||| || |||| ||| |||||| || || || |||||||||| Sbjct 116046 ACCGTTCCAAGGTCTTGAATCCAAAGAAGTTGTAGTTGAAGTCGCGGTCGT 115996 >seq64 Length=319606 Score = 143 bits (158), Expect = 3e-28 Identities = 187/259 (72%), Gaps = 0/259 (0%) Strand=Plus/Plus Query 1573980 GAACTCAACGCGTCGGACGAGCGCGGCGTCGACGTCGTGCGCAAGATCATCAAGCACCAC 1574039 ||| | ||||| |||||||| || ||| |||| || ||| | || | |||||||| Sbjct 9467 GAATTGAACGCCTCGGACGACCGAGGCATCGATGTGGTGAGGAACAAAATCAAGCAGTTT 9526 Query 1574040 GCCTCCAAGAGGATCGACCTGCCGCCCGGACGCCACAAGGTGATCATCCTCGACGAGGCC 1574099 || | | |||| ||||||| || |||||||| | ||||| | |||||||| Sbjct 9527 GCGCAGACCAAGATCCTGTTGCCGCCGGGCCGCCACAAAATCATCATTTTGGACGAGGCG 9586 Query 1574100 GACTGCCTCACGTCGGCGGCCCAGCAGGCCCTGCGGTCCACCATGGAAAAGCACACCAAC 1574159 |||| | | ||| ||| |||||||||||| |||| ||| ||||| | || ||||| Sbjct 9587 GACTCCATGACGCCGGGCGCCCAGCAGGCCTTGCGCCGCACAATGGAGTTGTACTCCAAC 9646 Query 1574160 ACGACGCGCTTTGCCCTGGCGTGCAACACGTCGTCGATGGTCATCGAGGCCCTCCAAAGT 1574219 || ||||| ||||| | ||||||||| |||||||| |||||||| | ||||| Sbjct 9647 ACCACGCGGTTTGCGTTTGCGTGCAACCAGTCGTCGAAAATCATCGAGCCACTCCAGCTG 9706 Query 1574220 CGCTGCGCCATTCTGCGCT 1574238 | ||||||||| |||||| Sbjct 9707 AGATGCGCCATTTTGCGCT 9725 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6107126562038818