Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Metschnikowia_20australis_20[genbank_20GCA_5F002073855.1_202017-03- 29] 154 sequences; 14,350,841 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq64 127 3e-23 seq68 118 2e-20 >seq64 Length=319606 Score = 127 bits (140), Expect = 3e-23 Identities = 136/180 (76%), Gaps = 0/180 (0%) Strand=Plus/Plus Query 2019196 TGCCGCCCGGCCGCCACAAGGTGATCATCCTCGATGAGGCCGACTGCCTTACGTCGGCGG 2019255 ||||||| ||||||||||| | ||||| | || ||||| |||| | | ||| ||| | Sbjct 9546 TGCCGCCGGGCCGCCACAAAATCATCATTTTGGACGAGGCGGACTCCATGACGCCGGGCG 9605 Query 2019256 CCCAGCAGGCCCTCCGATCGACCATGGAAAAGTACACCAACACGACGCGGTTTGCGCTGG 2019315 ||||||||||| | || || ||||| |||| ||||||| |||||||||||| | | Sbjct 9606 CCCAGCAGGCCTTGCGCCGCACAATGGAGTTGTACTCCAACACCACGCGGTTTGCGTTTG 9665 Query 2019316 CCTGCAACACGTCGTCGATGGTCATCGAAGCCCTCCAGAGCCGTTGCGCCATCTTGCGCT 2019375 | |||||| |||||||| ||||||| | |||||| | |||||||| ||||||| Sbjct 9666 CGTGCAACCAGTCGTCGAAAATCATCGAGCCACTCCAGCTGAGATGCGCCATTTTGCGCT 9725 >seq68 Length=1116518 Score = 118 bits (130), Expect = 2e-20 Identities = 228/335 (68%), Gaps = 15/335 (4%) Strand=Plus/Minus Query 794341 CCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTTC 794400 || ||||| || | ||||| ||||| ||| |||||| ||||| | ||| | |||| Sbjct 368236 CCCTCGTCACGGCAAATCAACTCGTTTGAAAACGTGAGGCCAGGCATCAAGCCTCTCTTC 368177 Query 794401 TTGAGCCAAAAGAT---GGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCA 794457 || | ||| ||||| |||| | | ||| |||||||||| ||||| ||||| || Sbjct 368176 TTTAACCAGAAGATCGAGGCAAATGA---GCCTGAGAAAAAGACACCCTCAACGGCAGCG 368120 Query 794458 AAGCCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTTTGT---TGATCCACTTCATC 794514 ||| | || | | |||| |||| || | |||| || | |||||||| ||| Sbjct 368119 AAGGCAACCAATCTCTCGCCAAA------CAAGGCCTCCTTATCACTGATCCACCTCAAG 368066 Query 794515 GCCCACTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCC 794574 ||||| || || |||||| | | | || | |||| || || ||| | | ||| Sbjct 368065 GCCCAATCGGCTTTTTTCTTGATACATGGGATGTTGTCAATTGCATTAAACAAGAAGTCG 368006 Query 794575 TTCTCGACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATG 794634 || |||||||||| ||||||||| || | | ||||||||||| || || || Sbjct 368005 GATTCCTTGGGGTCCTTGATGTAGGTGTCAATCAACAAGGAGTAGGTCTCCGAATGAATA 367946 Query 794635 TTTTCGATGGCGATCTGGAAGCCATAAAAGCAGTT 794669 || || || ||||||||| ||||| ||||| || Sbjct 367945 TTCTCCATCATGATCTGGAATCCATAGAAGCACTT 367911 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916230018317606