Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Metschnikowia_20australis_20[genbank_20GCA_5F002073855.1_202017-03- 29] 154 sequences; 14,350,841 total letters Query= NC_023177.1 Length=124688 Score E Sequences producing significant alignments: (Bits) Value seq91 105 5e-18 seq79 104 2e-17 seq96 100 2e-16 >seq91 Length=77570 Score = 105 bits (116), Expect = 5e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 |||||||| |||||||| || || || || || || || || |||| ||||| Sbjct 414 ATGCAAATCTTTGTCAAGACCTTGACCGGAAAGACAATCACACTCGAGGTCGAGGCCTCT 473 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 || || | | | || ||| |||||| ||||| || ||| | || || || Sbjct 474 GACACCATTGATAATGTCAAAGCCAAGATTCAAGATAAGGAGGGCATTCCACCAGACCAA 533 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 || ||| | |||| || ||||| || ||||||||| || |||| || | ||||||||| Sbjct 534 CAAAGATTGATTTTCGCCGGTAAGCAATTGGAGGACGGCAGAACATTGTCTGACTACAAC 593 Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGGA 107783 || || |||||||| || ||||| ||||| | |||||| |||| ||| Sbjct 594 ATCCAGAAGGAGTCCACATTGCATTTGGTGCTCAGATTGAGAGGCGGA 641 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/226 (69%), Gaps = 2/226 (1%) Strand=Plus/Plus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 |||||||| |||||||| || || || || || || || || |||| ||||| Sbjct 186 ATGCAAATCTTTGTCAAGACCTTGACCGGAAAGACAATCACACTCGAGGTCGAGGCCTCG 245 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 || || | | | || ||| |||||| ||||| || ||| | || || || Sbjct 246 GACACCATTGATAATGTCAAAGCCAAGATTCAAGATAAGGAGGGCATTCCACCAGACCAA 305 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 || ||| | || | || ||||| || ||||||||| || |||| || | ||||||||| Sbjct 306 CAAAGATTGATCTTCGCCGGTAAGCAATTGGAGGACGGCAGAACATTGTCCGACTACAAC 365 Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGG 107781 || || |||||||| || ||||| ||||| | ||||| |||||| Sbjct 366 ATCCAGAAGGAGTCCACATTGCATTTGGTGCTCAGATT--GAGGGG 409 Score = 87.8 bits (96), Expect = 1e-12 Identities = 105/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 107640 AAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAGCAGAGACTTATTTATGCGGGTAAA 107699 |||||| ||||| || ||| | || || || || ||| | |||| || ||||| Sbjct 42 AAGATTCAAGATAAGGAGGGCATTCCACCAGACCAACAAAGATTGATTTTCGCCGGTAAG 101 Query 107700 CAGCTGGAGGACGCCAAAACAATGGCGGACTACAACATTCAAAAGGAGTCTACGTTGCAC 107759 || ||||||||| || |||| || | ||||||||||| || |||||||| || ||||| Sbjct 102 CAATTGGAGGACGGCAGAACATTGTCCGACTACAACATCCAGAAGGAGTCCACATTGCAT 161 Query 107760 ATGGTGTTGAGATTGCGAGGGGG 107782 ||||| | ||||| |||| || Sbjct 162 TTGGTGCTCAGATTAAGAGGTGG 184 >seq79 Length=900310 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 |||||||| || ||||| || ||||| || || ||||| || | || ||||| | Sbjct 649329 ATGCAAATCTTCGTCAAGACCTTAACGGGTAAGACCATCACTTTGGAGGTCGAGGCCTCC 649388 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 || || ||| | | || || ||||| || || ||||| | || || ||| Sbjct 649389 GACACCATCGACAATGTCAAGGCCAAGATCCAAGACAAGGAAGGAATTCCACCTGACCAG 649448 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 || ||| | || | || ||||| ||| ||||||||| || ||| || | ||||||||| Sbjct 649449 CAAAGATTGATCTTCGCTGGTAAGCAGTTGGAGGACGGCAGAACCTTGTCTGACTACAAC 649508 Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782 || || |||||||| |||||||| |||| | |||||| |||| || Sbjct 649509 ATCCAGAAGGAGTCCACGTTGCATTTGGTCCTCAGATTGAGAGGTGG 649555 >seq96 Length=44914 Score = 100 bits (110), Expect = 2e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 107553 AAAATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCT 107612 ||||||||||| || |||||||| |||| || || || || || |||| ||||| Sbjct 262 AAAATGCAAATCTTCGTCAAAACACTAACCGGAAAGACAATCACACTCGAGGTCGAGGCC 203 Query 107613 GGCGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGAT 107672 || || | | | || ||| |||||| ||||| || ||| | || || Sbjct 202 TCGGACACCATTGATAATGTCAAAGCCAAGATTCAAGATAAGGAGGGCATTCCACCAGAC 143 Query 107673 CAGCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTAC 107732 || || ||| | || | || ||||| || ||||||||| || |||| || | |||||| Sbjct 142 CAACAAAGATTGATCTTCGCCGGTAAGCAATTGGAGGACGGCAGAACATTGTCCGACTAC 83 Query 107733 AACATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782 ||||| || |||||||| || ||||| ||||| | ||||| |||| || Sbjct 82 AACATCCAGAAGGAGTCCACATTGCATTTGGTGCTCAGATTAAGAGGTGG 33 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398876051358106