Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Metschnikowia_20australis_20[genbank_20GCA_5F002073855.1_202017-03-
29] 154 sequences; 14,350,841 total letters
Query= NC_023442.1
Length=120420
Score E
Sequences producing significant alignments: (Bits) Value
seq91 104 2e-17
seq79 95.1 9e-15
seq96 93.3 3e-14
>seq91
Length=77570
Score = 104 bits (114), Expect = 2e-17
Identities = 164/230 (71%), Gaps = 4/230 (2%)
Strand=Plus/Minus
Query 29559 TCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCG- 29617
||| || ||||| | ||||||||||| | ||||| || || || ||||| || || |
Sbjct 641 TCCGCCTCTCAATCTGAGCACCAAATGCAATGTGGACTCCTTCTGGATGTTGTAGTCAGA 582
Query 29618 CAATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCG 29677
||||| | | || || | ||| || || || | ||||||||||| || || || |
Sbjct 581 CAATGTTCTGCCG-TCCTCCAATTGCTTACCGGCGAAAATCAATCTTTGTTGGTCTGGTG 523
Query 29678 GAATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCT 29736
|||| ||||| || ||||| ||| || | ||||||| | || | |||||||| ||
Sbjct 522 GAATGCCCTCCTTATCTTG-AATCTTGGCTTTGACATTATCAATGGTGTCAGAGGCCTCG 464
Query 29737 ACTTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|| || || || || || || || || ||||| || ||||| || |||||
Sbjct 463 ACCTCGAGTGTGATTGTCTTTCCGGTCAAGGTCTTGACAAAGATTTGCAT 414
Score = 102 bits (112), Expect = 6e-17
Identities = 163/229 (71%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCG-C 29618
|| |||||||| | ||||||||||| | ||||| || || || ||||| || || | |
Sbjct 412 CCACCCCTCAATCTGAGCACCAAATGCAATGTGGACTCCTTCTGGATGTTGTAGTCGGAC 353
Query 29619 AATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGG 29678
|||| | | || || | ||| || || || | ||||||||||| || || || ||
Sbjct 352 AATGTTCTGCCG-TCCTCCAATTGCTTACCGGCGAAGATCAATCTTTGTTGGTCTGGTGG 294
Query 29679 AATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTA 29737
||| ||||| || ||||| ||| || | ||||||| | || | ||||| || || |
Sbjct 293 AATGCCCTCCTTATCTTG-AATCTTGGCTTTGACATTATCAATGGTGTCCGAGGCCTCGA 235
Query 29738 CTTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
| || || || || || || || || ||||| || ||||| || |||||
Sbjct 234 CCTCGAGTGTGATTGTCTTTCCGGTCAAGGTCTTGACAAAGATTTGCAT 186
>seq79
Length=900310
Score = 95.1 bits (104), Expect = 9e-15
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
|| || ||||| | || |||||||| | |||||| || || || ||||| || || |
Sbjct 649555 CCACCTCTCAATCTGAGGACCAAATGCAACGTGGACTCCTTCTGGATGTTGTAGTCAGAC 649496
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| ||| | || || | || || ||||| | |||||||||||||| || || |||
Sbjct 649495 AAGGTTCTGCCGTCCTCCAACTGCTTACCAGCGAAGATCAATCTTTGCTGGTCAGGTGGA 649436
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739
|| || || |||||||| | || |||||| | || | ||||| || || ||
Sbjct 649435 ATTCCTTCCTTGTCTTGGATCTTGGCCTTGACATTGTCGATGGTGTCGGAGGCCTCGACC 649376
Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|| | ||| || || || || |||||||| || || || || |||||
Sbjct 649375 TCCAAAGTGATGGTCTTACCCGTTAAGGTCTTGACGAAGATTTGCAT 649329
>seq96
Length=44914
Score = 93.3 bits (102), Expect = 3e-14
Identities = 154/217 (71%), Gaps = 4/217 (2%)
Strand=Plus/Plus
Query 29575 AGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCG-CAATGGTGCGAGAATC 29633
||||||||||| | ||||| || || || ||||| || || | ||||| | | ||
Sbjct 48 AGCACCAAATGCAATGTGGACTCCTTCTGGATGTTGTAGTCGGACAATGTTCTGCCG-TC 106
Query 29634 ATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTC 29693
|| | ||| || || || | ||||||||||| || || || ||||| ||||| || ||
Sbjct 107 CTCCAATTGCTTACCGGCGAAGATCAATCTTTGTTGGTCTGGTGGAATGCCCTCCTTATC 166
Query 29694 TTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAG 29752
||| ||| || | ||||||| | || | ||||| || || || || || || || |
Sbjct 167 TTG-AATCTTGGCTTTGACATTATCAATGGTGTCCGAGGCCTCGACCTCGAGTGTGATTG 225
Query 29753 TTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789
| || || |||| ||||| || || || ||||||||
Sbjct 226 TCTTTCCGGTTAGTGTTTTGACGAAGATTTGCATTTT 262
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 385218476991714
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |