Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Metschnikowia_20australis_20[genbank_20GCA_5F002073855.1_202017-03- 29] 154 sequences; 14,350,841 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq73 219 5e-52 >seq73 Length=169253 Score = 219 bits (242), Expect = 5e-52 Identities = 1102/1738 (63%), Gaps = 37/1738 (2%) Strand=Plus/Minus Query 110369 TAGTACATCCCGGTCTTGAGTCCTTGTTTCCATGCGTACATATGCATAGAAGAGAGCTTG 110428 |||||||| || ||||| | ||| | |||||| |||| | ||||| || | | ||| Sbjct 117808 TAGTACATACCAGTCTTCAATCCCTTTTTCCAGCCGTAAAAGTGCATGGAGGTCAACTTA 117749 Query 110429 GACATCGTTGGACTTTCCATGAAGAGGTTCAT--ACTTTGACTTTGGTCAATGAAGCGCC 110486 ||| || || || ||| || ||||| ||| || ||||||||||||| | Sbjct 117748 CCCATGGTGGGGTCTTTGATGTGGATGTTCAAGGACTGGGA--TTGGTCAATGAAGGCCG 117691 Query 110487 CCCGTTGTGCCGCCATATCAATGACATCCTTCATCTTAATTTCCCAAACTGTGCGATAGA 110546 | | | || ||||| || || | | |||| | |||||||| ||||| || | Sbjct 117690 CTCTGTCGGCAGCCATGTCGATAATGTGCTTCTGCGAGATTTCCCACACTGTCTTGTACA 117631 Query 110547 GATTCTTGATATCATCTGGGATATCTGAGATATTCTGGATGGAACCCCCCGCCTTCACCA 110606 |||||| || || ||||| | | | |||||| ||||| | | Sbjct 117630 AGGCCTTGATGTCGTCAGGGATGTTGGGCAAGGACTGGATCGAACCGTTGTTAGAAATGA 117571 Query 110607 TGAGATCCTTCATATCCTTGGACCAGAGACCAATCTTCTTGAGGTCATTGACGAGGTGCT 110666 || | |||||| | | ||||||||| | | | ||| || | | |||| Sbjct 117570 TGTTGTTCTTCATGGAGTCGTTCCAGAGACCCAAGTCAACCAAGTCCTTCAACATGTGCG 117511 Query 110667 TGTTGACAATGACAAACTCACCTGCGAGGGTTCTTCTCAGGTAGATGTTTGTTGTGTATG 110726 ||||||||| |||||||||||| || |||||| |||||| || | ||||| | Sbjct 117510 AGTTGACAATTTGAAACTCACCTGCAAGCACTCTTCTGGAGTAGATATTGGAGGTGTAGG 117451 Query 110727 GTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCCA 110786 | || || || || || || |||||||| || | ||||| || |||||||||||||||| Sbjct 117450 GCTCGAAACACTCGTTGTTTCCCAAGATCTGCGACGTGGAAGCAGTTGGCATTGGTGCCA 117391 Query 110787 TCA--AAAGACTGTTACGAAGACCCTTCTCCTTGATGCGTTC--CTTGAGAACATCCCAG 110842 | || || ||| | || || | || | | |||| ||| | |||||| Sbjct 117390 CGAGCAACGA--GTTTCTGAGCCCGTGCT--TGGCCAAGTTCTGCTTCAACGTGTCCCAG 117335 Query 110843 TCGTAGTTGAGCTTGGTTTCACCTTCCCACATGTCAAACTGAAGCACCCCTTGGGACGCG 110902 || | ||| || | | ||||| |||| |||| | || || | || || Sbjct 117334 TCCCACAACCCGGTGGGTTTTCTGTTCCACAAGTCATACTGCAACAAGCCCTTAGAAGCC 117275 Query 110903 GGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTCAGCCAATTC-ACAGCTCGCCTC 110961 || || || | | || || || | ||||| ||| || | || | || | ||| Sbjct 117274 GGCGAGCCTTGGTACGTCTCGTATGGACCTTCTTCTTGGGCAAGCTCGATAGAG-GACTC 117216 Query 110962 CAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTGA 111021 | | ||||| || ||||| ||||| || || |||| |||| |||||| | || Sbjct 117215 GACTGCGGCGTGGTAGATGGTCTCAAAAATCTGAATGTTCAACTCCCGGGCTTCCTGGGA 117156 Query 111022 ATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGAGACCTTGAACACCCAAACCAAT 111081 || || | | | | | || || |||| || |||||||| || || | |||| Sbjct 117155 GTCGAAAGGCAATCTCAAGACCATGAACGCATCGGCAAGACCTTGTACGCCGACCGCAAT 117096 Query 111082 AGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCAACGGGATAAAAATTTCTGTCAAT 111141 || |||| || ||| || || ||| || || |||||||| ||||| | |||||| Sbjct 117095 TGGCCTGTTTCTCATGTTGGATCTTCTGGCCTCTTCGACGGGATAGAAATTGCGGTCAAT 117036 Query 111142 GACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATAAT---- 111197 || || ||| | ||| |||| |||| ||| || | || ||| | || || | | Sbjct 117035 GATTCTGTTCAAGTTTCTGGTCACAACCTTGGTAACTTGATGCAACTTCTCGAAGTTGTA 116976 Query 111198 -CAAAAGTGCG---AGTCTCTTCATTGACATACTTTGGAAGGGCGATTGATGCCAAATTG 111253 || | | || ||| | ||| | || | || | |||||| || ||||| || Sbjct 116975 CCACACGGACGTGGAGTTT-TTC-TCCACGAAAGAAGGCAAGGCGATCGACGCCAAGTTA 116918 Query 111254 CAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACATAAGTTGGAACTC 111313 || ||||| || || | |||||| | || || ||| ||||||||| | Sbjct 116917 CACACAGCGACTTCGTCGGGCGACGAGTACTCAACGATCTCGCAACACAAGTTGGAAGAC 116858 Query 111314 TTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACGCATCCTTGTAGAGCATG 111373 || ||| | ||||| ||||||||||| |||| | ||||||||| |||||||| | ||| Sbjct 116857 TTGATCATACCCAAGTTCTTTTGGTTGGTCTTTTCGTTGCACGCGTCCTTGTACAACATA 116798 Query 111374 TAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTCCAAA-CATCGGCGGCTGG 111432 | || || || || || ||||| | || | || || | ||| | | | | | || Sbjct 116797 AATGGAGTGCCGGTTTCGGTCTGCGCTTCCAAGATGGCGTACCAGAGCTTTTGTGCCTTC 116738 Query 111433 TACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTC 111492 || | | || | || ||||| |||||| || ||| | ||| || ||||| || Sbjct 116737 -ACGGTAGATCTGCCGCGGCCCTCTCTCTCGTATTTCTCGTATAAGGCCTCGAACTCGTC 116679 Query 111493 ACCC-ACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGACCAC 111551 ||| | | | || | | ||| | |||| || |||| |||| | | ||| | |||| Sbjct 116678 ACCGTAGCAC-TCAGGCAAACCACGGGCCTCGTTTGGAGAGAACAAGGTCCAGTCACCAT 116620 Query 111552 CTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTCTAC 111611 ||| || || | ||||||||| | ||| || ||||| || | | || | ||||| Sbjct 116619 CTTGTTCGACTCTCTTCATGAACAAGTCCGGGATCCAAAGCGCAGGGAACAAGTCTCTGG 116560 Query 111612 ACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGT 111671 | ||||| | || ||||| || | || | || || | ||| ||||||| Sbjct 116559 CTCTGTTTTCTTCTTTGCCGTGGTTCTTTCTGATGTCGATAAAATCAAAGATGTCCGCGT 116500 Query 111672 GCCATGGCTCAAGATAGACTGCGAT------AGATCCCTTTCGACGCCCAGCTTGATTTA 111725 |||||||||| | ||||| || | || || ||| || || || | | Sbjct 116499 GCCATGGCTCCAAATAGAGGGCAAAGGCACCAGGTCTCTTGTTACCTCCC---TGGTCAA 116443 Query 111726 CATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGACCAT 111785 |||| || || || ||| || || || | ||| ||||| ||||| | || || | Sbjct 116442 CATAACGTGCGGTATTGTTGAAGACACGCACCATAGGAATGATACCGTTGGACGTTCCGT 116383 Query 111786 TTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAATACCCC 111845 | || || ||| | | ||| || | | || ||||||| |||||||| | Sbjct 116382 TGGTACCAGCAATGTAGGCTCCGGTGGACCTGATGTTGTGTATGTGCAAGCCAATACCGC 116323 Query 111846 CAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGT 111905 | || | || ||||| ||||| | | | || | ||||| |||| ||| |||| Sbjct 116322 CGGCAGATTTGGAGATCAAGGCACAGGTCTTCAAGGTGTCGTAGATTCCGTCGATGGAGT 116263 Query 111906 CCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATTGA 111965 | ||||| |||||| ||||| || ||||| || || ||||| || || || |||| Sbjct 116262 CGTCCTTCATGGCGACGAGGAAACACGACGACATTTGGGGGCTTGGCGTGCCTGCGTTGA 116203 Query 111966 AGAGGGTTGGTGTTGCGTGAATGAACATACCTTGGGACATCTTGTCGTATGTCTCCAAGA 112025 | || || || | |||| |||| | | |||||| ||| ||| ||||| | || Sbjct 116202 AAAGCGTGGGGGAGCCGTGCGTGAAGTAGCGCAGCGACATCATGTTGTAAGTCTCGATGA 116143 Query 112026 CAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGACCCGCATGAACATGTACTGTGG 112083 || |||||| ||||||||||| | |||||| ||||| | || || ||| || Sbjct 116142 CACGGGGAATGTCCCTGCCGTGGATGCCCACTGCGACACGCATAAGCAAGTGCTGCGG 116085 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628030791038400