Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Metschnikowia_20australis_20[genbank_20GCA_5F002073855.1_202017-03- 29] 154 sequences; 14,350,841 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq73 174 2e-38 seq112 87.8 2e-12 >seq73 Length=169253 Score = 174 bits (192), Expect = 2e-38 Identities = 907/1437 (63%), Gaps = 33/1437 (2%) Strand=Plus/Plus Query 104222 CCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTC 104281 || ||| || || | ||||| || || | || || || || |||||| |||| Sbjct 116085 CCGCAGCACTTGCTTATGCGTGTCGCAGTGGGCATCCACGGCAGGGACATTCCCCGTGTC 116144 Query 104282 TTGGAGACATACGACAAGATGTCCCAAGGTATGTTCATTCACGCAACACCAACCCTCTTC 104341 | ||||| ||| ||| |||||| | | |||| |||| | || || || ||| Sbjct 116145 ATCGAGACTTACAACATGATGTCGCTGCGCTACTTCACGCACGGCTCCCCCACGCTTTTC 116204 Query 104342 AATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGAC 104401 || || || || ||||| ||||||||||| || ||||| |||||| ||||| ||| Sbjct 116205 AACGCAGGCACGCCAAGCCCCCAAATGTCGTCGTGTTTCCTCGTCGCCATGAAGGACGAC 116264 Query 104402 TCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGGG 104461 || ||| |||| ||||| | || | | | ||||| ||||| || | || || Sbjct 116265 TCCATCGACGGAATCTACGACACCTTGAAGACCTGTGCCTTGATCTCCAAATCTGCCGGC 116324 Query 104462 GGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAAT 104521 |||||||| ||||||| || | | || ||| | | ||| || || || Sbjct 116325 GGTATTGGCTTGCACATACACAACATCAGGTCCACCGGAGCCTACATTGCTGGTACCAAC 116384 Query 104522 GGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTA 104581 || || | ||||| ||||| ||| | || || || ||| || || || ||||| Sbjct 116385 GGAACGTCCAACGGTATCATTCCTATGGTGCGTGTCTTCAACAATACCGCACGTTATGTT 116444 Query 104582 AATCAAGCTGGGCGTCGAAAGGGATCT------ATCGCAGTCTATCTTGAGCCATGGCAC 104635 | || || || ||| || || | || ||||| | |||||||||||| Sbjct 116445 GACCA---GGGAGGTAACAAGAGACCTGGTGCCTTTGCCCTCTATTTGGAGCCATGGCAC 116501 Query 104636 GCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGGTGC 104695 ||||| ||| | || || | || | | ||||| || | || || | | || Sbjct 116502 GCGGACATCTTTGATTTTATCGACATCAGAAAGAACCACGGCAAAGAAGA-AAACAGAGC 116560 Query 104696 C-GCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAG 104754 | | || | ||| | || || ||||| || || | |||||||||||||| || | Sbjct 116561 CAGAGACTTGTTCCCTGCGCTTTGGATCCCGGACTTGTTCATGAAGAGAGTCGAACAAGA 116620 Query 104755 TGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTGGGTGA 104814 ||| | ||| | | || | |||| || |||| | |||| | | || | ||||| Sbjct 116621 TGGTGACTGGACCTTGTTCTCTCCAAACGAGGCCCGTGGTTTGCCTGAGTGCTACGGTGA 116680 Query 104815 GGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGCGACGGTGCC 104874 ||||| || ||| | ||| || |||||| ||| || || | | | || ||| Sbjct 116681 CGAGTTCGAGGCCTTATACGAGAAATACGAGAGAGAGGGCCGCGGCAGATCTACCGTGAA 116740 Query 104875 AGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATACAT 104934 || | | ||| | || || | | | || ||||| || || || |||| || Sbjct 116741 GGCACAAAAGCTCTGGTACGCCATCTTGGAAGCGCAGACCGAAACCGGCACTCCATTTAT 116800 Query 104935 GCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAG 104994 | | ||||| ||||| || ||| |||||| || |||||||| |||||| |||||||| Sbjct 116801 GTTGTACAAGGACGCGTGCAACGAAAAGACCAACCAAAAGAACTTGGGTATGATCAAGTC 116860 Query 104995 TTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTAA 105054 |||||| | ||| || ||| | || | | || || ||||||||||| Sbjct 116861 TTCCAACTTGTGTTGCGAGATCGTTGAGTACTCGTCGCCCGACGAAGTCGCTGTGTGTAA 116920 Query 105055 CCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAG-ACATTTG-----A 105108 | | || || ||||| | || | ||||| | | | | | | | || | Sbjct 116921 CTTGGCGTCGATCGCCTTGCCTTCTTTCGTGGAGAAAAACTCCACGTCCGTGTGGTACAA 116980 Query 105109 TTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTTATTGA 105168 | || || | || ||||||| || ||| |||| |||| | |||||| | ||||| Sbjct 116981 CTTCGAGAAGTTGCATCAAGTTACCAAGGTTGTGACCAGAAACTTGAACAGAATCATTGA 117040 Query 105169 TAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGG 105228 | ||||| || ||||| || || | | ||| || |||||| || | ||||||| Sbjct 117041 CCGCAATTTCTATCCCGTCGAAGAGGCCAGAAGATCCAACATGAGAAACAGGCCAATTGC 117100 Query 105229 TCTCGGTGTTCAGGGTCTCGCGGATGTATTCAT--TCTT--TGTCGCCACGCATTTGATT 105284 |||| || || ||||| || |||| ||||| |||| | || | || || | Sbjct 117101 GGTCGGCGTACAAGGTCTTGCCGATGCGTTCATGGTCTTGAGATTGC----CTTTCGACT 117156 Query 105285 CCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCTCTTG 105344 || | ||||| ||| | || | || ||||||||||| || |||||||| | | Sbjct 117157 CCCAGGAAGCCCGGGAGTTGAACATTCAGATTTTTGAGACCATCTACCACGCCGCAGTCG 117216 Query 105345 AGGCGAGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAG 105404 || | | ||| | || | | || |||||||| || || | | || || || | Sbjct 117217 AGTCCTCTATCGAGCTTGCCCAAGAAGAAGGTCCATACGAGACGTACCAAGGCTCGCCGG 117276 Query 105405 CTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCA--AGCTTCACTACGA 105462 |||| | || || | || | ||| ||||| | | | ||| | || | || Sbjct 117277 CTTCTAAGGGCTTGTTGCAGTATGACTTGTGGAACAGAAAACCCACCGGGTT--GTGGGA 117334 Query 105463 CTGGGAAGCTCTCAAG--GAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTCCTCATG 105520 |||||| | | ||| |||| | | || | || || | ||| | ||| || Sbjct 117335 CTGGGACACGTTGAAGCAGAACTTGGCCA--AGCACGGGCTCAGAAACTCGTTGCTCGTG 117392 Query 105521 GCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCC 105580 || ||||||||||| || ||||| | || |||||||| || || || || || || ||| Sbjct 117393 GCACCAATGCCAACTGCTTCCACGTCGCAGATCTTGGGAAACAACGAGTGTTTCGAGCCC 117452 Query 105581 TACACGACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAAC 105637 ||||| | || ||||| |||||| || || || |||||| ||||||||| Sbjct 117453 TACACCTCCAATATCTACTCCAGAAGAGTGCTTGCAGGTGAGTTTCAAATTGTCAAC 117509 >seq112 Length=679525 Score = 87.8 bits (96), Expect = 2e-12 Identities = 162/235 (69%), Gaps = 2/235 (1%) Strand=Plus/Plus Query 9695 TTTCCCACGGCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAGCGACT 9754 ||||| | ||||| || ||||||| ||||| ||| | || |||| | ||| | Sbjct 471645 TTTCCAATTGCATCGATTTCATCAACGAAGATGATCGAGGGAGCCATTTCCCTTGCGGTT 471704 Query 9755 TCAAAGAGATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCG 9814 | ||||||||| || ||||| || || ||||| || ||||| |||||||| | | Sbjct 471705 TTAAAGAGATCACGCACACGGGAAGCACCTACACCCACGAACATTTCCACAAATTCAGAA 471764 Query 9815 GCGGA-ACATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGT 9873 | || ||| | ||| || ||| || ||||| ||| ||||| ||| | |||||| Sbjct 471765 CCAGAGACAGACAA-GAAAGGAACACCAGCCTCACCTGCAGTGGCTTTGGCCAAAAGAGT 471823 Query 9874 CTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCCA 9928 |||||| || || || ||||| ||| | ||||||| || || || || ||| Sbjct 471824 CTTACCTGTTCCGGGAGGACCCGAGAGAATAGCACCTCTGGGGATTTTAGCACCA 471878 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583259677222960