Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Metschnikowia_20australis_20[genbank_20GCA_5F002073855.1_202017-03-
29] 154 sequences; 14,350,841 total letters
Query= NC_028110.1
Length=171045
Score E
Sequences producing significant alignments: (Bits) Value
seq73 131 2e-25
seq79 109 6e-19
>seq73
Length=169253
Score = 131 bits (144), Expect = 2e-25
Identities = 291/432 (67%), Gaps = 5/432 (1%)
Strand=Plus/Plus
Query 55487 AACTCCCTGCTCGTGGCGCCAATGCCAACCGCGTCGACGGCTCAGATCATGGGCAACAAC 55546
||||| |||||||||| ||||||||||| || || ||| | |||||| |||| ||||||
Sbjct 117378 AACTCGTTGCTCGTGGCACCAATGCCAACTGCTTCCACGTCGCAGATCTTGGGAAACAAC 117437
Query 55547 GAGGCGTTCGAGCCGTACACGACCAACATCTACCTGCGCCGGACCCTAGCAGGTGAGTTT 55606
||| |||||||| ||||| |||| |||||| | | || ||||||||||||
Sbjct 117438 GAGTGTTTCGAGCCCTACACCTCCAATATCTACTCCAGAAGAGTGCTTGCAGGTGAGTTT 117497
Query 55607 GTCATGATCAACAAGCACCTCGTCAAGGACCTGCAGAAGATCAACAAGTGGAACCCGCAG 55666
|| ||||| |||| | | |||||| || | | ||||||
Sbjct 117498 CAAATTGTCAACTCGCACATGTTGAAGGACTTGGTTGACTTGGGTCTCTGGAACGACTCC 117557
Query 55667 ATCAAGACGGATATTGTGCGGAACGGGGGGTCCGTCCAGAATCTGGAGAT--TCCTCTG- 55723
|| |||| | || | ||| || || ||||| || | ||| |||
Sbjct 117558 ATGAAGAACAACATCATTTCTAACAACGGTTCGATCCAGTCCTTGCCCAACATCC-CTGA 117616
Query 55724 CGTC-TCAAGGAGATTTACCGGACGGTGTGGGAGATTCCACAGAAGAGTCTGATTGACAT 55782
|| | |||||| | ||| ||| |||||||| || | |||||| | || |||||
Sbjct 117617 CGACATCAAGGCCTTGTACAAGACAGTGTGGGAAATCTCGCAGAAGCACATTATCGACAT 117676
Query 55783 GAGTGCTGATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACATCTTCATGGAGAA 55842
| ||| || | | || | ||| ||||| |||||||| |||||||| ||| | |
Sbjct 117677 GGCTGCCGACAGAGCGGCCTTCATTGACCAATCCCAGTCCTTGAACATCCACATCAAAGA 117736
Query 55843 TCCTTCACTGGCCAAGTTGAGCTCGATGCACTTTTACGGGTGGAAGAAGGGACTCAAGAC 55902
|| | ||| ||||||| ||| |||||||||||||| ||||| |||||| | |||||
Sbjct 117737 CCCCACCATGGGTAAGTTGACCTCCATGCACTTTTACGGCTGGAAAAAGGGATTGAAGAC 117796
Query 55903 GGGTATGTACTA 55914
|||||||||||
Sbjct 117797 TGGTATGTACTA 117808
>seq79
Length=900310
Score = 109 bits (120), Expect = 6e-19
Identities = 301/454 (66%), Gaps = 8/454 (2%)
Strand=Plus/Plus
Query 53333 TGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGCATCTACGAGACGCTCAAGGAG 53392
|||||||| ||||| ||| | || || || || || ||||| ||| | |||||| | ||
Sbjct 896187 TGCTTCCTTGTGGCAATGGACGACGATTCCATTGATGGCATTTACAAAACGCTCCACAAG 896246
Query 53393 TGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTATCCAC-TGCTCGAACGTCCGTGC 53451
|| | ||| ||| | | ||||| || || ||||| ||| ||| || || |
Sbjct 896247 GCAGCGCTCATTCTGAAGGGCACCGGTGGCATAGGCATCCATGTGCACGATATTCGGTCC 896306
Query 53452 GAACGGCACACCAATCAAGGGGACGAACGG--CGTCGCCGATGGAATCGTGCCTATGCTC 53509
|| ||| | | || || | | ||||| |||| | | || | ||||| ||||||
Sbjct 896307 -AATGGCTCCCTCATAAAATCGTCCAACGGAACGTC--CAACGGCTTGGTGCCGATGCTC 896363
Query 53510 CGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTGGTGGGAAGCGCAAGGGGTCG 53569
|| |||||||||||||| ||| |||| || |||| || || ||| | ||| ||
Sbjct 896364 CGAGTCTTCAACAACACCGCCAGGTATGTGGACCAAGGCGGGAACAAGAGACCGGGCGCG 896423
Query 53570 TTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATGGAGTTTCTCGAGCTGCGTCTG 53629
| ||||| || || ||||| ||||||| ||| || ||| | | || || ||
Sbjct 896424 ATAGCCATTTATCTAGAGCCCTGGCACGGCGATATCCAAGAGGTCTTGGACCTCCGCAAA 896483
Query 53630 AATCAGGGTGACGAAGAGATGCGCTGCCGTGACCTGTT-TACAGCTCTGTGGATTCCGGA 53688
|| || ||| | |||||| | || |||||| || || ||| || |||||||||| ||
Sbjct 896484 AACCACGGTCAGGAAGAGCTCCGGGCCCGTGATCTTTTCTAC-GCCTTGTGGATTCCTGA 896542
Query 53689 CCTCTTCATGCAAAAGGTGGAGAAGGACGAGGAGTGGTACCTGATGTGCCCGAACGAGTG 53748
| |||||| | || |||| || | | | |||| ||| | | || | ||||
Sbjct 896543 TTTGTTCATGGAGCGTGTCGAGAGCGATGCGCAATGGTCCCTCTTTTCGCCTAGCGAGGC 896602
Query 53749 CCCCGGCCTCCAGGGTGTCTACGGTGAGGAGTTT 53782
||||| || | ||| || || ||||||||
Sbjct 896603 TCCCGGACTTGCCGATGTGTATGGGAAGGAGTTT 896636
Score = 87.8 bits (96), Expect = 2e-12
Identities = 104/141 (74%), Gaps = 0/141 (0%)
Strand=Plus/Plus
Query 55136 CGGAACCTGAACCGGGTCATCGACAAGAATTACTACCCGACTGAAGCGGCGCGCAAGTCC 55195
|||||||| || || || || || || |||||| ||||| || ||||| ||
Sbjct 896967 CGGAACCTCGACAAAGTGATTGATGTGACTTTATACCCGCTTGAAGATGCCCGCAAATCG 897026
Query 55196 AACCTCCGGCACCGGCCCATCGCCATCGGTGTACAGGGCTTGGCCGACATCTTCATGATG 55255
||| || | ||| | ||||| ||||| |||||||||||| | || ||| | |||||| |
Sbjct 897027 AACTTCAGCCACAGACCCATAGCCATAGGTGTACAGGGCCTTGCAGACGTATTCATGGAG 897086
Query 55256 CTCGGATTGCCCTTCGACTCG 55276
||| |||||||||| || |||
Sbjct 897087 CTCAGATTGCCCTTTGAATCG 897107
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 547214946609200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |