Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Metschnikowia_20australis_20[genbank_20GCA_5F002073855.1_202017-03- 29] 154 sequences; 14,350,841 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq73 131 2e-25 seq79 109 6e-19 >seq73 Length=169253 Score = 131 bits (144), Expect = 2e-25 Identities = 291/432 (67%), Gaps = 5/432 (1%) Strand=Plus/Plus Query 55487 AACTCCCTGCTCGTGGCGCCAATGCCAACCGCGTCGACGGCTCAGATCATGGGCAACAAC 55546 ||||| |||||||||| ||||||||||| || || ||| | |||||| |||| |||||| Sbjct 117378 AACTCGTTGCTCGTGGCACCAATGCCAACTGCTTCCACGTCGCAGATCTTGGGAAACAAC 117437 Query 55547 GAGGCGTTCGAGCCGTACACGACCAACATCTACCTGCGCCGGACCCTAGCAGGTGAGTTT 55606 ||| |||||||| ||||| |||| |||||| | | || |||||||||||| Sbjct 117438 GAGTGTTTCGAGCCCTACACCTCCAATATCTACTCCAGAAGAGTGCTTGCAGGTGAGTTT 117497 Query 55607 GTCATGATCAACAAGCACCTCGTCAAGGACCTGCAGAAGATCAACAAGTGGAACCCGCAG 55666 || ||||| |||| | | |||||| || | | |||||| Sbjct 117498 CAAATTGTCAACTCGCACATGTTGAAGGACTTGGTTGACTTGGGTCTCTGGAACGACTCC 117557 Query 55667 ATCAAGACGGATATTGTGCGGAACGGGGGGTCCGTCCAGAATCTGGAGAT--TCCTCTG- 55723 || |||| | || | ||| || || ||||| || | ||| ||| Sbjct 117558 ATGAAGAACAACATCATTTCTAACAACGGTTCGATCCAGTCCTTGCCCAACATCC-CTGA 117616 Query 55724 CGTC-TCAAGGAGATTTACCGGACGGTGTGGGAGATTCCACAGAAGAGTCTGATTGACAT 55782 || | |||||| | ||| ||| |||||||| || | |||||| | || ||||| Sbjct 117617 CGACATCAAGGCCTTGTACAAGACAGTGTGGGAAATCTCGCAGAAGCACATTATCGACAT 117676 Query 55783 GAGTGCTGATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACATCTTCATGGAGAA 55842 | ||| || | | || | ||| ||||| |||||||| |||||||| ||| | | Sbjct 117677 GGCTGCCGACAGAGCGGCCTTCATTGACCAATCCCAGTCCTTGAACATCCACATCAAAGA 117736 Query 55843 TCCTTCACTGGCCAAGTTGAGCTCGATGCACTTTTACGGGTGGAAGAAGGGACTCAAGAC 55902 || | ||| ||||||| ||| |||||||||||||| ||||| |||||| | ||||| Sbjct 117737 CCCCACCATGGGTAAGTTGACCTCCATGCACTTTTACGGCTGGAAAAAGGGATTGAAGAC 117796 Query 55903 GGGTATGTACTA 55914 ||||||||||| Sbjct 117797 TGGTATGTACTA 117808 >seq79 Length=900310 Score = 109 bits (120), Expect = 6e-19 Identities = 301/454 (66%), Gaps = 8/454 (2%) Strand=Plus/Plus Query 53333 TGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGCATCTACGAGACGCTCAAGGAG 53392 |||||||| ||||| ||| | || || || || || ||||| ||| | |||||| | || Sbjct 896187 TGCTTCCTTGTGGCAATGGACGACGATTCCATTGATGGCATTTACAAAACGCTCCACAAG 896246 Query 53393 TGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTATCCAC-TGCTCGAACGTCCGTGC 53451 || | ||| ||| | | ||||| || || ||||| ||| ||| || || | Sbjct 896247 GCAGCGCTCATTCTGAAGGGCACCGGTGGCATAGGCATCCATGTGCACGATATTCGGTCC 896306 Query 53452 GAACGGCACACCAATCAAGGGGACGAACGG--CGTCGCCGATGGAATCGTGCCTATGCTC 53509 || ||| | | || || | | ||||| |||| | | || | ||||| |||||| Sbjct 896307 -AATGGCTCCCTCATAAAATCGTCCAACGGAACGTC--CAACGGCTTGGTGCCGATGCTC 896363 Query 53510 CGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTGGTGGGAAGCGCAAGGGGTCG 53569 || |||||||||||||| ||| |||| || |||| || || ||| | ||| || Sbjct 896364 CGAGTCTTCAACAACACCGCCAGGTATGTGGACCAAGGCGGGAACAAGAGACCGGGCGCG 896423 Query 53570 TTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATGGAGTTTCTCGAGCTGCGTCTG 53629 | ||||| || || ||||| ||||||| ||| || ||| | | || || || Sbjct 896424 ATAGCCATTTATCTAGAGCCCTGGCACGGCGATATCCAAGAGGTCTTGGACCTCCGCAAA 896483 Query 53630 AATCAGGGTGACGAAGAGATGCGCTGCCGTGACCTGTT-TACAGCTCTGTGGATTCCGGA 53688 || || ||| | |||||| | || |||||| || || ||| || |||||||||| || Sbjct 896484 AACCACGGTCAGGAAGAGCTCCGGGCCCGTGATCTTTTCTAC-GCCTTGTGGATTCCTGA 896542 Query 53689 CCTCTTCATGCAAAAGGTGGAGAAGGACGAGGAGTGGTACCTGATGTGCCCGAACGAGTG 53748 | |||||| | || |||| || | | | |||| ||| | | || | |||| Sbjct 896543 TTTGTTCATGGAGCGTGTCGAGAGCGATGCGCAATGGTCCCTCTTTTCGCCTAGCGAGGC 896602 Query 53749 CCCCGGCCTCCAGGGTGTCTACGGTGAGGAGTTT 53782 ||||| || | ||| || || |||||||| Sbjct 896603 TCCCGGACTTGCCGATGTGTATGGGAAGGAGTTT 896636 Score = 87.8 bits (96), Expect = 2e-12 Identities = 104/141 (74%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 55136 CGGAACCTGAACCGGGTCATCGACAAGAATTACTACCCGACTGAAGCGGCGCGCAAGTCC 55195 |||||||| || || || || || || |||||| ||||| || ||||| || Sbjct 896967 CGGAACCTCGACAAAGTGATTGATGTGACTTTATACCCGCTTGAAGATGCCCGCAAATCG 897026 Query 55196 AACCTCCGGCACCGGCCCATCGCCATCGGTGTACAGGGCTTGGCCGACATCTTCATGATG 55255 ||| || | ||| | ||||| ||||| |||||||||||| | || ||| | |||||| | Sbjct 897027 AACTTCAGCCACAGACCCATAGCCATAGGTGTACAGGGCCTTGCAGACGTATTCATGGAG 897086 Query 55256 CTCGGATTGCCCTTCGACTCG 55276 ||| |||||||||| || ||| Sbjct 897087 CTCAGATTGCCCTTTGAATCG 897107 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547214946609200