Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Metschnikowia_20australis_20[genbank_20GCA_5F002073855.1_202017-03- 29] 154 sequences; 14,350,841 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq96 116 3e-21 seq91 102 6e-17 >seq96 Length=44914 Score = 116 bits (128), Expect = 3e-21 Identities = 166/231 (72%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667 |||||||| || ||||| ||||| || || ||||| || ||||| ||||| || || || Sbjct 262 AAAATGCAAATCTTCGTCAAAACACTAACCGGAAAGACAATCACACTCGAGGTCGAGGCC 203 Query 23668 ACGGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGA 23726 ||||||| |||| ||| | ||| | || | || || || || || | || ||||| Sbjct 202 TCGGACACCATTGATAATGTCAAAGCCAAGA-TTCAAGATAAGGAGGGCATTCCACCAGA 144 Query 23727 TCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTA 23786 ||||| | || || || ||||| || ||| |||| |||| | || || ||| || Sbjct 143 CCAACAAAGATTGATCTTCGCCGGTAAGCAATTGGAGGACGGCAGAACATTGTCCGACTA 84 Query 23787 CAACATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 |||||| || || ||||||||||| ||||| || | || || |||| || Sbjct 83 CAACATCCAGAAGGAGTCCACATTGCATTTGGTGCTCAGATTAAGAGGTGG 33 >seq91 Length=77570 Score = 102 bits (112), Expect = 6e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| || || || || ||| | || ||||| || ||||| ||||| || || || || Sbjct 186 ATGCAAATCTTTGTCAAGACCTTGACCGGAAAGACAATCACACTCGAGGTCGAGGCCTCG 245 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| |||| ||| | ||| | || | || || || || || | || ||||| || Sbjct 246 GACACCATTGATAATGTCAAAGCCAAGA-TTCAAGATAAGGAGGGCATTCCACCAGACCA 304 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| | || || || ||||| || ||| |||| |||| | || || ||| ||||| Sbjct 305 ACAAAGATTGATCTTCGCCGGTAAGCAATTGGAGGACGGCAGAACATTGTCCGACTACAA 364 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 ||| || || ||||||||||| ||||| || | || ||| | || || Sbjct 365 CATCCAGAAGGAGTCCACATTGCATTTGGTGCTCAGATTGAGGGGTGG 412 Score = 102 bits (112), Expect = 6e-17 Identities = 162/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| || || || || ||| | || ||||| || ||||| ||||| || || || | Sbjct 414 ATGCAAATCTTTGTCAAGACCTTGACCGGAAAGACAATCACACTCGAGGTCGAGGCCTCT 473 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| |||| ||| | ||| | || | || || || || || | || ||||| || Sbjct 474 GACACCATTGATAATGTCAAAGCCAAGA-TTCAAGATAAGGAGGGCATTCCACCAGACCA 532 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| | || || || ||||| || ||| |||| |||| | || || || ||||| Sbjct 533 ACAAAGATTGATTTTCGCCGGTAAGCAATTGGAGGACGGCAGAACATTGTCTGACTACAA 592 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGGAT 23839 ||| || || ||||||||||| ||||| || | || ||| |||| |||| Sbjct 593 CATCCAGAAGGAGTCCACATTGCATTTGGTGCTCAGATTGAGAGGCGGAT 642 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 338008965598232