Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Metschnikowia_20australis_20[genbank_20GCA_5F002073855.1_202017-03-
29] 154 sequences; 14,350,841 total letters
Query= NC_031465.1
Length=360610
Score E
Sequences producing significant alignments: (Bits) Value
seq96 107 4e-18
seq79 105 2e-17
seq91 100 7e-16
>seq96
Length=44914
Score = 107 bits (118), Expect = 4e-18
Identities = 155/219 (71%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 151889 TCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCC 151948
|||||| || | ||| | || ||||| || ||||||||||| |||| || ||||| ||
Sbjct 44 TCTGAGCACCAAATGCAATGTGGACTCCTTCTGGATGTTGTAGTCGGACAATGTTCTGCC 103
Query 151949 ATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTT 152008
|| || | || ||||||||||| | || || ||||| | | || || |||||
Sbjct 104 GTCCTCCAATTGCTTACCGGCGAAGATCAATCTTTGTTGGTCTGGTGGAATGCCCTCCTT 163
Query 152009 TTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAAT 152068
|||||||| || ||||||| | || | | |||| || ||| || || || || ||
Sbjct 164 ATCTTGAATCTTGGCTTTGACATTATCAATGGTGTCCGAGGCCTCGACCTCGAGTGTGAT 223
Query 152069 AGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107
|| || || || || || || ||||||| ||||||||
Sbjct 224 TGTCTTTCCGGTTAGTGTTTTGACGAAGATTTGCATTTT 262
>seq79
Length=900310
Score = 105 bits (116), Expect = 2e-17
Identities = 153/216 (71%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 151889 TCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCC 151948
||||||||| | ||| | || ||||| || ||||||||||| || | || ||||| ||
Sbjct 649544 TCTGAGGACCAAATGCAACGTGGACTCCTTCTGGATGTTGTAGTCAGACAAGGTTCTGCC 649485
Query 151949 ATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTT 152008
|| || | || || |||||||| | || |||||||| | | |||||||||||
Sbjct 649484 GTCCTCCAACTGCTTACCAGCGAAGATCAATCTTTGCTGGTCAGGTGGAATTCCTTCCTT 649425
Query 152009 TTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAAT 152068
||||| || || |||||| | || | | |||| || ||| || || | ||| ||
Sbjct 649424 GTCTTGGATCTTGGCCTTGACATTGTCGATGGTGTCGGAGGCCTCGACCTCCAAAGTGAT 649365
Query 152069 AGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| || ||||| | ||||| ||||||| |||||
Sbjct 649364 GGTCTTACCCGTTAAGGTCTTGACGAAGATTTGCAT 649329
>seq91
Length=77570
Score = 100 bits (110), Expect = 7e-16
Identities = 165/237 (70%), Gaps = 1/237 (0%)
Strand=Plus/Minus
Query 151883 CCTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGT 151942
||| | |||||| || | ||| | || ||||| || ||||||||||| |||| || ||
Sbjct 407 CCTCAATCTGAGCACCAAATGCAATGTGGACTCCTTCTGGATGTTGTAGTCGGACAATGT 348
Query 151943 TCTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCC 152002
||| || || || | || ||||||||||| | || || ||||| | | || ||
Sbjct 347 TCTGCCGTCCTCCAATTGCTTACCGGCGAAGATCAATCTTTGTTGGTCTGGTGGAATGCC 288
Query 152003 TTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAG 152062
||||| |||||||| || ||||||| | || | | |||| || ||| || || ||
Sbjct 287 CTCCTTATCTTGAATCTTGGCTTTGACATTATCAATGGTGTCCGAGGCCTCGACCTCGAG 228
Query 152063 AGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTTACC-CTTACTCT 152118
|| || || || || || | ||||| || |||| ||||| ||| |||| |||
Sbjct 227 TGTGATTGTCTTTCCGGTCAAGGTCTTGACAAAGATTTGCATACCACCTCTTAATCT 171
Score = 87.8 bits (96), Expect = 4e-12
Identities = 149/216 (69%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 151889 TCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCC 151948
|||||| || | ||| | || ||||| || ||||||||||| || | || ||||| ||
Sbjct 629 TCTGAGCACCAAATGCAATGTGGACTCCTTCTGGATGTTGTAGTCAGACAATGTTCTGCC 570
Query 151949 ATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTT 152008
|| || | || |||||||| || | || || ||||| | | || || |||||
Sbjct 569 GTCCTCCAATTGCTTACCGGCGAAAATCAATCTTTGTTGGTCTGGTGGAATGCCCTCCTT 510
Query 152009 TTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAAT 152068
|||||||| || ||||||| | || | | |||| || ||| || || || || ||
Sbjct 509 ATCTTGAATCTTGGCTTTGACATTATCAATGGTGTCAGAGGCCTCGACCTCGAGTGTGAT 450
Query 152069 AGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| || || || | ||||| || |||| |||||
Sbjct 449 TGTCTTTCCGGTCAAGGTCTTGACAAAGATTTGCAT 414
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1153818523367334
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |