Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Metschnikowia_20australis_20[genbank_20GCA_5F002073855.1_202017-03- 29] 154 sequences; 14,350,841 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq79 167 5e-36 seq91 163 6e-35 seq96 158 3e-33 >seq79 Length=900310 Score = 167 bits (184), Expect = 5e-36 Identities = 176/229 (77%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAG- 282930 |||||| | || | || |||| ||| |||||| || || |||||||||||||||| Sbjct 649556 ACCACCTCTCAATCTGAGGACCAAATGCAACGTGGACTCCTTCTGGATGTTGTAGTCAGA 649497 Query 282931 CAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCG 282990 |||| || | ||| ||||| | || || || || |||||||| | ||| |||||| | Sbjct 649496 CAAG-GTTCTGCCGTCCTCCAACTGCTTACCAGCGAAGATCAATCTTTGCTGGTCAGGTG 649438 Query 282991 GAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGA 283050 |||| || ||||||||||||||||| || || || | ||||| ||||| || || |||| Sbjct 649437 GAATTCCTTCCTTGTCTTGGATCTTGGCCTTGACATTGTCGATGGTGTCGGAGGCCTCGA 649378 Query 283051 CTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 | || | |||||| ||||||||||| || ||||| ||||| || ||||| Sbjct 649377 CCTCCAAAGTGATGGTCTTACCCGTTAAGGTCTTGACGAAGATTTGCAT 649329 >seq91 Length=77570 Score = 163 bits (180), Expect = 6e-35 Identities = 173/228 (76%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||| | || | || |||| ||| || ||| || || |||||||||||||| | Sbjct 413 ACCACCCCTCAATCTGAGCACCAAATGCAATGTGGACTCCTTCTGGATGTTGTAGTCGGA 354 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 | || | ||| ||||| | ||| || ||||| |||||||| | ||||||||| || Sbjct 353 CAATGTTCTGCCGTCCTCCAATTGCTTACCGGCGAAGATCAATCTTTGTTGGTCTGGTGG 294 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||| |||||||| ||||| ||||| ||||| || |||| || |||||||| || ||||| Sbjct 293 AATGCCCTCCTTATCTTGAATCTTGGCTTTGACATTATCAATGGTGTCCGAGGCCTCGAC 234 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||||| ||||| ||||| || ||||| ||||| || || || ||||| Sbjct 233 CTCGAGTGTGATTGTCTTTCCGGTCAAGGTCTTGACAAAGATTTGCAT 186 Score = 158 bits (174), Expect = 3e-33 Identities = 162/212 (76%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 282888 AGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCC 282947 || |||| ||| || ||| || || |||||||||||||||| | || | ||| ||| Sbjct 625 AGCACCAAATGCAATGTGGACTCCTTCTGGATGTTGTAGTCAGACAATGTTCTGCCGTCC 566 Query 282948 TCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCT 283007 || | ||| || ||||| || ||||| | ||||||||| ||||| |||||||| ||| Sbjct 565 TCCAATTGCTTACCGGCGAAAATCAATCTTTGTTGGTCTGGTGGAATGCCCTCCTTATCT 506 Query 283008 TGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTC 283067 || ||||| ||||| || |||| || ||||| || || ||||| ||||| ||||| ||| Sbjct 505 TGAATCTTGGCTTTGACATTATCAATGGTGTCAGAGGCCTCGACCTCGAGTGTGATTGTC 446 Query 283068 TTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || || ||||| ||||| || || || ||||| Sbjct 445 TTTCCGGTCAAGGTCTTGACAAAGATTTGCAT 414 Score = 116 bits (128), Expect = 8e-21 Identities = 127/169 (75%), Gaps = 0/169 (0%) Strand=Plus/Minus Query 282888 AGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCC 282947 || |||| ||| || ||| || || |||||||||||||| | | || | ||| ||| Sbjct 169 AGCACCAAATGCAATGTGGACTCCTTCTGGATGTTGTAGTCGGACAATGTTCTGCCGTCC 110 Query 282948 TCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCT 283007 || | ||| || ||||| || ||||| | ||||||||| ||||| |||||||| ||| Sbjct 109 TCCAATTGCTTACCGGCGAAAATCAATCTTTGTTGGTCTGGTGGAATGCCCTCCTTATCT 50 Query 283008 TGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGA 283056 || ||||| ||||| || |||| || ||||| || || ||||| |||| Sbjct 49 TGAATCTTGGCTTTGACATTATCAATGGTGTCAGAGGCCTCGACCTCGA 1 >seq96 Length=44914 Score = 158 bits (174), Expect = 3e-33 Identities = 164/215 (76%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 282888 AGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCC 282947 || |||| ||| || ||| || || |||||||||||||| | | || | ||| ||| Sbjct 48 AGCACCAAATGCAATGTGGACTCCTTCTGGATGTTGTAGTCGGACAATGTTCTGCCGTCC 107 Query 282948 TCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCT 283007 || | ||| || ||||| |||||||| | ||||||||| ||||| |||||||| ||| Sbjct 108 TCCAATTGCTTACCGGCGAAGATCAATCTTTGTTGGTCTGGTGGAATGCCCTCCTTATCT 167 Query 283008 TGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTC 283067 || ||||| ||||| || |||| || |||||||| || ||||| ||||| ||||| ||| Sbjct 168 TGAATCTTGGCTTTGACATTATCAATGGTGTCCGAGGCCTCGACCTCGAGTGTGATTGTC 227 Query 283068 TTACCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102 || || || | || || ||||| || |||||||| Sbjct 228 TTTCCGGTTAGTGTTTTGACGAAGATTTGCATTTT 262 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046737134652716