Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Metschnikowia_20australis_20[genbank_20GCA_5F002073855.1_202017-03- 29] 154 sequences; 14,350,841 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq96 131 4e-25 seq91 114 3e-20 seq79 114 3e-20 >seq96 Length=44914 Score = 131 bits (144), Expect = 4e-25 Identities = 166/228 (73%), Gaps = 3/228 (1%) Strand=Plus/Minus Query 177915 AAAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA 177974 ||||||| |||| ||||| ||||| || || ||||| || ||||| |||||||| || Sbjct 262 AAAATGC---AAATCTTCGTCAAAACACTAACCGGAAAGACAATCACACTCGAGGTCGAG 206 Query 177975 AGCTCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCG 178034 ||| |||||||| || || |||||| |||||||| || || || || || || || Sbjct 205 GCCTCGGACACCATTGATAATGTCAAAGCCAAGATTCAAGATAAGGAGGGCATTCCACCA 146 Query 178035 GACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGAT 178094 ||||| ||| || | ||||||||||| || || | || || || || || | |||| Sbjct 145 GACCAACAAAGATTGATCTTCGCCGGTAAGCAATTGGAGGACGGCAGAACATTGTCCGAC 86 Query 178095 TATAACGTCCAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142 || ||| |||| || || || ||| ||||| | || | ||| | ||| Sbjct 85 TACAACATCCAGAAGGAGTCCACATTGCATTTGGTGCTCAGATTAAGA 38 >seq91 Length=77570 Score = 114 bits (126), Expect = 3e-20 Identities = 146/201 (73%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| || || || || | || ||||| || ||||| |||||||| || ||| ||| Sbjct 189 CAAATCTTTGTCAAGACCTTGACCGGAAAGACAATCACACTCGAGGTCGAGGCCTCGGAC 248 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| || || |||||| |||||||| || || || || || || || ||||| ||| Sbjct 249 ACCATTGATAATGTCAAAGCCAAGATTCAAGATAAGGAGGGCATTCCACCAGACCAACAA 308 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | ||||||||||| || || | || || || || || | |||| || ||| || Sbjct 309 AGATTGATCTTCGCCGGTAAGCAATTGGAGGACGGCAGAACATTGTCCGACTACAACATC 368 Query 178104 CAAAAAGAATCAACACTGCAT 178124 || || || || ||| ||||| Sbjct 369 CAGAAGGAGTCCACATTGCAT 389 >seq79 Length=900310 Score = 114 bits (126), Expect = 3e-20 Identities = 159/220 (72%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| ||||| || || | || || || || ||||| | ||||| || ||| ||| Sbjct 649332 CAAATCTTCGTCAAGACCTTAACGGGTAAGACCATCACTTTGGAGGTCGAGGCCTCCGAC 649391 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| || ||||| ||||| || ||||| |||||||| || || ||||||||| Sbjct 649392 ACCATCGACAATGTCAAGGCCAAGATCCAAGACAAGGAAGGAATTCCACCTGACCAGCAA 649451 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTG-CCGATTATAACGT 178102 || | |||||||| || || ||| | || || || || || |||| | || || ||| | Sbjct 649452 AGATTGATCTTCGCTGGTAAGCAGTTGGAGGACGGCAGAAC-CTTGTCTGACTACAACAT 649510 Query 178103 CCAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142 ||| || || || || ||||| | || | ||| | ||| Sbjct 649511 CCAGAAGGAGTCCACGTTGCATTTGGTCCTCAGATTGAGA 649550 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203728824887876