Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Millerozyma_20acaciae_20[genbank_20GCA_5F001600675.1_202016-03-01] 10 sequences; 11,065,882 total letters Query= NC_001623.1 Length=133894 Score E Sequences producing significant alignments: (Bits) Value seq7 122 7e-23 seq2 82.4 7e-11 >seq7 Length=997883 Score = 122 bits (134), Expect = 7e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021 |||||||| ||| ||||||||||||| || || |||||||| ||| ||| | || Sbjct 388751 ATGCAAATTTTCGTCAAAACATTGACCGGTAAGACCATTACTTTAGAAGTTGAATCATCA 388692 Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081 || || | | | || | ||| || ||| || || || || | || |||||| Sbjct 388691 GATACAATTGACAATGTCAAGTCCAAGATTCAAGACAAGGAGGGAATCCCACCTGATCAA 388632 Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAAT 29141 |||||| | |||||||| || || ||| |||||||| || |||| || |||| ||||| Sbjct 388631 CAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGCAGAACTTTGTCCGACTACAAC 388572 Query 29142 ATTCAGAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 29188 || || |||||||||||| | || ||||||| |||| |||| || Sbjct 388571 ATCCAAAAGGAATCTACTTTACATTTGGTGTTGAGATTGAGAGGTGG 388525 Score = 111 bits (122), Expect = 1e-19 Identities = 163/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 28958 AAAAATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACC 29017 ||| |||||||| ||| | ||||||||||| || || ||||| ||| ||| || | Sbjct 388983 AAATATGCAAATTTTCGTTAAAACATTGACCGGTAAGACCATCACCTTGGAAGTCGAGTC 388924 Query 29018 CGCAGAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGA 29077 | || || | | | | ||| || ||| || || || || | || ||| Sbjct 388923 TTCCGACACCATCGATAACGTCAAGTCTAAGATTCAAGACAAGGAGGGAATTCCTCCAGA 388864 Query 29078 TCAACAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTA 29137 ||||||||| | |||||||| || || ||| |||||||| || |||| || |||| || Sbjct 388863 CCAACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGCAGAACTTTGTCCGACTA 388804 Query 29138 CAATATTCAGAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 29188 ||| ||||| |||||||||||| | ||| |||| ||| |||| |||| || Sbjct 388803 CAACATTCAAAAGGAATCTACTTTACACTTGGTTTTAAGATTGAGAGGTGG 388753 Score = 98.7 bits (108), Expect = 9e-16 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021 |||||||| || | || || ||||| || || ||||||||| ||| || || | Sbjct 388523 ATGCAAATCTTTGTTAAGACTTTGACCGGTAAGACCATTACCTTAGAAGTTGAGTCCTCC 388464 Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081 || || | | | || | ||| || ||| ||||| ||||| | || |||||| Sbjct 388463 GACACTATCGACAATGTCAAGTCCAAGATTCAAGATAAGGAAGGAATCCCACCTGATCAA 388404 Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAAT 29141 |||||| | |||||||| || || ||| |||||||| || |||| || |||| ||||| Sbjct 388403 CAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGCAGAACTTTGTCCGACTACAAC 388344 Query 29142 ATTCAGAAGGAATCTAC 29158 || || ||||||||||| Sbjct 388343 ATCCAAAAGGAATCTAC 388327 >seq2 Length=1761743 Score = 82.4 bits (90), Expect = 7e-11 Identities = 156/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 28959 AAAATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCC 29018 || |||||||| ||| | || || || || || || || || || ||| ||| | Sbjct 928151 AAGATGCAAATTTTCGTTAAGACCTTAACTGGTAAGACTATCACTTTAGAAGTCGAATCT 928210 Query 29019 GCAGAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGAT 29078 | || || | | | || | ||| || ||| || || ||||| | || ||| Sbjct 928211 TCTGACACTATTGACAATGTCAAGTCCAAGATTCAAGACAAGGAAGGAATTCCTCCAGAC 928270 Query 29079 CAACAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTAC 29138 ||||||||| | |||||||| || || ||| |||| ||| || ||| || | || ||| Sbjct 928271 CAACAAAGATTGATCTTTGCTGGTAAGCAATTGGAGGATGGCAGAACCTTGTCTGACTAC 928330 Query 29139 AATATTCAGAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 29188 || || || ||||||||||| | ||| ||||||| |||| |||| || Sbjct 928331 AACATCCAAAAGGAATCTACCTTGCACTTGGTGTTGAGATTGAGAGGTGG 928380 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 428335947796550