Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Millerozyma_20acaciae_20[genbank_20GCA_5F001600675.1_202016-03-01] 10 sequences; 11,065,882 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq2 201 2e-46 seq4 89.7 8e-13 >seq2 Length=1761743 Score = 201 bits (222), Expect = 2e-46 Identities = 591/896 (66%), Gaps = 21/896 (2%) Strand=Plus/Minus Query 124996 TGTTTCCCATCAGGTATCATGACATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTT 125055 |||| || |||| ||| || || |||||| |||||||||| ||||| |||| || || | Sbjct 1445017 TGTTCCCTATCAAGTACCACGAGATTTGGCAAATGTACAAGAAGGCCGAGGCGTCTTTCT 1444958 Query 125056 GGACGGTCGAAGAGGTCGATCTGTCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTG 125115 |||| | || ||| | ||| || ||| || | |||| ||| || | |||| | Sbjct 1444957 GGACTGCGGAGGAGATTGATTTGGGCAAAGATATCCACGACTGGAAGGAGAGATTGAACG 1444898 Query 125116 AAACTGAGCGAGAGTTTATATCGCACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCG 125175 | | ||| | || || || || ||||| |||||||| | || ||||| || | Sbjct 1444897 ACAACGAGAAGTACTTCATTTCAAGAATCTTGGCTTTCTTTGCTGCATCGGATGGTATTG 1444838 Query 125176 TCAACGACAATCTG-TTGACACGATTCTCTCAAGAGTTGACCATTCCAGAGGTGTCGTGC 125234 ||||||| || || |||| | || ||| ||| || |||||||| | ||| Sbjct 1444837 TCAACGAGAACTTGGTTGAAAATTTT-TCTGCTGAGGTGCAAATTCCAGAAGCCAAGTGT 1444779 Query 125235 TTTTACGGATTCCAAATCATGATTGAGAACGTGCACTCGGAAATGTACTCTACACTGATT 125294 || ||||| |||||||||||||| |||||| | ||||| || | |||||| || || Sbjct 1444778 TTCTACGGGTTCCAAATCATGATGGAGAACATCCACTCTGAGACCTACTCTTTGCTTATC 1444719 Query 125295 GACATGTACATTCGCGATCCGCAACGTAAACACATGCTCTTTAACGCAATCGACACGGTG 125354 |||| ||||| || || ||| | || | | || ||||| ||||| | | Sbjct 1444718 GACACCTACATCAAGGACCCCCAAGAAGCAGACTTTTTGTTCAACGCCATCGAGAACATT 1444659 Query 125355 CCGTCTATACGTAAAAAGGCTCAATGGGTGATTCGGTGGATCGATGACGACAAGT-CTTC 125413 || | ||| || |||||| | |||| | |||||||| | |||| |||| | | Sbjct 1444658 CCATGTATCAAGAAGAAGGCTGACTGGGCTTTGAGGTGGATCAACGACG-GAAGTGCCTT 1444600 Query 125414 GTACGCCGACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTT 125473 || | || ||| | || || ||||||||||| ||||| ||||| || || || Sbjct 1444599 GTTTGGTGAGAGATTAGTTGCGTTCGCCGCCGTCGAGGGTATCTTTTTCAGTGGATCATT 1444540 Query 125474 TGCGGCCATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGA 125533 || | ||||| ||| | ||||| | || | ||||| || |||| | ||||| Sbjct 1444539 CGCTTCTATCTTCTGGTTAAAGAAAAGAGGTTTGATGCCAGGTTTGACTTTCTCCAACGA 1444480 Query 125534 GTTTATATCTCGAGACGAGGGCCTACACTGTGACTTTGCCATTCTACTGTTTCGC-AACT 125592 ||| || | | |||| || || ||||| ||||||| ||| || | ||| | ||| Sbjct 1444479 GTTGATTTGTAGAGATGAAGGTTTACACACCGACTTTG-CATGCTTGTTGTTCTCTCACT 1444421 Query 125593 ATCTGCGTCCCGAGTGCAGATCCAGCGATGAAAAGGTCATCAACATTGTAACCGATGCCG 125652 ||| || |||||| || ||| ||| || ||| | ||||| || | Sbjct 1444420 ---TGC-AAAATAGACCAGATCAAGAGAT-----TGTCGAAAAAATTATCACCGAAGCAG 1444370 Query 125653 TGAGGATAGAACAAGAGTTTCTAACCGAATCCCTACCGGTCAGCATGATT-GGCATGAAC 125711 | | || || ||||||| | ||| || | || || ||| ||| || |||||| Sbjct 1444369 TCACAATCGAGAAAGAGTTCTTTGTCGATGCCTTGCCCGT-GTCATTATTGGGTATGAAC 1444311 Query 125712 TGCAAGCTAATGTGCGAGTACATAGAGTTTGTGGCAGATCGTCTACTGTACGAGTTGATT 125771 |||| | ||||| |||| | ||||| || || || | |||| | ||| | Sbjct 1444310 GCCAAGTTGATGTGTCAGTATGTCGAGTTCGTTGCCGACAGATTACTTGTTGCTTTGGGT 1444251 Query 125772 GGCCGCAAGATTTACAACGCCAAGAATCCCTTTGATTTCATGACCAGCATATCACTAGAG 125831 | |||| ||||||||| || ||||| || ||||||||| | |||||| | | | Sbjct 1444250 AACAACAAGGTTTACAACGTCACAAATCCATTCGATTTCATGGAAAACATATCGTTGGCG 1444191 Query 125832 GGTAAGACCAACTTTTTCGAGAAGAAGGTCAGCGAGTAC--AAACGCTACGGTGTC 125885 || ||||| |||||||||||||| | ||||| || ||| ||| || ||||||| Sbjct 1444190 GGAAAGACTAACTTTTTCGAGAAAAGAGTCAGTGACTACCAAAAAGC--CGGTGTC 1444137 >seq4 Length=1450032 Score = 89.7 bits (98), Expect = 8e-13 Identities = 164/238 (69%), Gaps = 2/238 (1%) Strand=Plus/Minus Query 70034 TTGGATTCGCTCGGCTTCACCGACAGACAAGAGGGCGATCTGGGGCCAGTGTACGGATTC 70093 || ||||| ||||||| | || | |||||| ||| |||| |||||||| |||||| Sbjct 1412836 TTAGATTCCATCGGCTTGAAAGATCGTAGAGAGGGAGATTTGGGACCAGTGTATGGATTC 1412777 Query 70094 CAGTGGAGGCACTCGGGCACCAAGTATGTAGACTGCGAGACAGACTATTCGGGTCAGGGT 70153 |||||||| || | || |||| || |||||||| || |||| ||||| || Sbjct 1412776 CAGTGGAGACATTTTGGTGCCAAATACAAGGACTGCGAAACCAACTACGATGGTCAAGGG 1412717 Query 70154 GTTGATCAATTGCAGACAA-TCATTGACACTCTCAAGACCAATCCAACAGATAGGAGGAT 70212 ||||||| | || || | ||| ||| |||||||| || || ||||| | || Sbjct 1412716 TATGATCAACT-AAGTGAAGTGATTCACAAACTCAAGACGAACCCTTACGATAGACGAAT 1412658 Query 70213 CGTAATGTGCTCATGGAATCCTGCAGATTTGCACCAAATGGCACTACCACCGTGTCAC 70270 | |||| |||||||||| |||| || | || ||||| |||| || || ||| Sbjct 1412657 TATCATGTCAGCATGGAATCCACCAGACTTCCCACAGATGGCCTTACCGCCTTGCCAC 1412600 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741059107367600