Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Millerozyma_20acaciae_20[genbank_20GCA_5F001600675.1_202016-03-01] 10 sequences; 11,065,882 total letters Query= NC_005179.1 Length=134721 Score E Sequences producing significant alignments: (Bits) Value seq2 143 2e-29 >seq2 Length=1761743 Score = 143 bits (158), Expect = 2e-29 Identities = 552/854 (65%), Gaps = 31/854 (4%) Strand=Plus/Plus Query 12859 TTTTTGATATTCGCTAACTCTTTTTTCAAAAAAGTTTGTTTTTCCTTCTAACGAAATATT 12918 |||||| || || || |||||||| || |||||||| || ||||| | ||||| || || Sbjct 1444146 TTTTTGGTAGTCACTGACTCTTTTCTCGAAAAAGTTAGTCTTTCCCGCCAACGATATGTT 1444205 Query 12919 TTCCATAAAATCGAAAGGATTTTTCGAACAATAGTA----TTTTTTACACCCTAATTCTA 12974 |||||| |||||||| |||||| | || | ||| || || |||| || | | Sbjct 1444206 TTCCATGAAATCGAATGGATTTGTG--ACGTT-GTAAACCTTGTTGTTACCCAAAG-CAA 1444261 Query 12975 GTAACAATCTGTCAGCAACAAACTCTATGTACTGTTTCATTAAATCACAGTTCATTCCTA 13034 | |||||||| ||||| ||||| | ||||| ||| || | |||||| || | Sbjct 1444262 CAAGTAATCTGTCGGCAACGAACTCGACATACTGACACATCAACTTGGCGTTCATACCCA 1444321 Query 13035 TTAATTTTACAGGCATAGCTTCTGTTAAAAAGtttttttCTATATCAACTGCTTCGATAA 13094 |||| || |||| || || || || | ||| || || ||||||||| | | Sbjct 1444322 ATAATGACACGGGCAAGGCATCGACAAAGAACTCTTTCTCGATTGTGACTGCTTCGGTGA 1444381 Query 13095 CTATGTCTCTTATTACGTTCTCTAA---TGGAGGATTTGATAGATGCTTAAACATCATAC 13151 || | || || ||||| ||| |||| | || |||| || | Sbjct 1444382 TAATTT---TTTCGACAATCTCTTGATCTGGTCTATTTTGCAAGTGAGAGAACAACAAGC 1444438 Query 13152 ATGCAAAATCACAGTGCAATCCTTCATCTCTACTTATTAGCTCGTTTGAAAATGTTAGAC 13211 ||||||| || ||| || ||||||||||||| || | |||||| || || || | || Sbjct 1444439 ATGCAAAGTCGGTGTGTAAACCTTCATCTCTACAAATCAACTCGTTGGAGAAAGTCAAAC 1444498 Query 13212 CCGGCATAAGCCCTCGTTTTTTAATCCAAAATATAGCAGCAAACGAACCCGaaaaaaaTA 13271 | ||||| | |||| ||| || | ||| || |||| ||| || || || ||||| | Sbjct 1444499 CTGGCATCAAACCTCTTTTCTTTAACCAGAAGATAGAAGCGAATGATCCACTGAAAAAGA 1444558 Query 13272 TTCCTTCAACTGCTGCAAACGCTATCAACCTTTCACCATAC---GTACTATTTTTACTC- 13327 | || || || || || ||||| | || || |||||| || | || || || Sbjct 1444559 TACCCTCGACGGCGGCGAACGCAACTAATCTCTCACCAAACAAGGCAC----TTCCGTCG 1444614 Query 13328 TCTATCCACTTTCTGGCCCAGTTTGCTTTTTGTTTAACGCAGTTCATATTTTCTATTGCG 13387 | |||||| | ||||||| || || | || | || || || || || ||| Sbjct 1444615 TTGATCCACCTCAAAGCCCAGTCAGCCTTCTTCTTGATACATGGAATGTTCTCGATGGCG 1444674 Query 13388 TTAAATAAATAAtttttttCCTTACTGTCTAAAATATAAGTATCTATCAATAAGCTATAC 13447 || || ||| | | | ||| | ||| || || || || || | || || Sbjct 1444675 TTGAACAAAAAGTCTGCTTCTTGGGGGTCCTTGATGTAGGTGTCGATAAGCAAAGAGTAG 1444734 Query 13448 ATTTCTGAATGAATATTTTCCATCGCTATTTGGAAACCATAAAAACATCTAGCCTCTGAT 13507 | || || || || || |||||| |||||||| || || ||||| | || |||| Sbjct 1444735 GTCTCAGAGTGGATGTTCTCCATCATGATTTGGAACCCGTAGAAACACTTGGCTTCTGGA 1444794 Query 13508 ACCTGAACTTC-GGAGTAAAATCTTTCTGCTAAGTTTTCGTTAACTATCCCGTCACTAGC 13566 | || || || | || ||||| |||| | ||||| ||||| || || || || || Sbjct 1444795 ATTTGCACCTCAGCAGAAAAAT-TTTCAACCAAGTTCTCGTTGACAATACCATCCGATGC 1444853 Query 13567 AGCaaaaaaaGCAAGTATGTGCTT--AATAAAttttttttCGTTTTCTGACAA---CTTT 13621 |||||| ||||| | | | ||| ||| || | || ||||| || ||| || Sbjct 1444854 AGCAAAGAAAGCCA--AGATTCTTGAAATGAAGTACTTCTCGTTGTCGTTCAATCTCTCC 1444911 Query 13622 AACCAATCTGGAAAATCTTTTGATAAATCTACCTCCTCAACGGTCCAAAAAGAAGCAACA 13681 ||| || | | |||||| ||||| | |||||| | ||||| ||||| || | Sbjct 1444912 TTCCAGTCGTGGATATCTTTGCCCAAATCAATCTCCTCCGCAGTCCAGAAAGACGCCTCG 1444971 Query 13682 GCCTTCTTATACAT 13695 |||||||| ||||| Sbjct 1444972 GCCTTCTTGTACAT 1444985 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430982347474020