Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Millerozyma_20acaciae_20[genbank_20GCA_5F001600675.1_202016-03-01] 10 sequences; 11,065,882 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq2 149 1e-30 seq7 140 7e-28 >seq2 Length=1761743 Score = 149 bits (164), Expect = 1e-30 Identities = 291/425 (68%), Gaps = 15/425 (4%) Strand=Plus/Minus Query 268877 GATGGTATCGTTAACGAAAATCTAGTAGAGAAGTTCTGTCAAGAGGTACAGATTCCTGAA 268936 |||||||| || ||||| || | || || || || | | ||||| || ||||| ||| Sbjct 1444847 GATGGTATTGTCAACGAGAACTTGGTTGAAAATTTTTCTGCTGAGGTGCAAATTCCAGAA 1444788 Query 268937 GCCAGATGTTTTTACGGATTCCAGATAGCTATAGAAAATATTCATTCAGAGATGTACAGT 268996 |||| ||||| ||||| ||||| || || || || || || || |||| ||| | Sbjct 1444787 GCCAAGTGTTTCTACGGGTTCCAAATCATGATGGAGAACATCCACTCTGAGACCTACTCT 1444728 Query 268997 CTATTAATAGATACTTATATAGATGATAACAACGAAAAGAAAAGACTATTTTCTTCTATG 269056 | | || || || || || | || | | ||| ||||| |||| ||| | | Sbjct 1444727 TTGCTTATCGACACCTACATCAAGGACCCCCAAGAAGC----AGACT-TTTTGTTCAACG 1444673 Query 269057 ------AGAACTATGGACTGTGTGAGaaaaaaaTCTGAATGGGCTCTGAAATGGATAAAC 269110 ||||| | | ||| | | || || |||| |||||| ||| ||||| ||| Sbjct 1444672 CCATCGAGAACATTCCA-TGTATCAAGAAGAAGGCTGACTGGGCTTTGAGGTGGATCAAC 1444614 Query 269111 GATAGC-GCGCCTTAC--GGAGAAAGGTTAGTTGCTTTTGCCGCTGTAGAAGGTATATTC 269167 || | | ||||| || || || |||||||| || ||||| || || ||||| || Sbjct 1444613 GACGGAAGTGCCTTGTTTGGTGAGAGATTAGTTGCGTTCGCCGCCGTCGAGGGTATCTTT 1444554 Query 269168 TTTTCGGGGTCTTTTGCCGCTATCTTTTGGTTGAAGAAAAGAGGCCTTATGCCAGGATTA 269227 || || || || || ||||||| ||||| ||||||||||| | |||||||| || Sbjct 1444553 TTCAGTGGATCATTCGCTTCTATCTTCTGGTTAAAGAAAAGAGGTTTGATGCCAGGTTTG 1444494 Query 269228 ACTTTCTCTAACGAATTGATAAGCAGGGACGAAGGTTTACACTGCGACTTCGCTTGTTTA 269287 |||||||| ||||| ||||| | || || |||||||||||| |||||| || || || Sbjct 1444493 ACTTTCTCCAACGAGTTGATTTGTAGAGATGAAGGTTTACACACCGACTTTGCATGCTTG 1444434 Query 269288 TTATT 269292 || || Sbjct 1444433 TTGTT 1444429 Score = 125 bits (138), Expect = 2e-23 Identities = 152/207 (73%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 104357 TGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGT 104416 || || |||||||| || || || || |||||||| | ||||| || || || | ||| Sbjct 928356 TGCAAGGTAGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTGCCATCCTCCAATTGC 928297 Query 104417 TTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTT 104476 || |||||||| || | || ||||| || ||||| |||||||| || || |||||||| Sbjct 928296 TTACCAGCAAAGATCAATCTTTGTTGGTCTGGAGGAATTCCTTCCTTGTCTTGAATCTTG 928237 Query 104477 GCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTA 104536 | || ||||| || | || || || ||| || |||| || |||||||||||||| Sbjct 928236 GACTTGACATTGTCAATAGTGTCAGAAGATTCGACTTCTAAAGTGATAGTCTTACCAGTT 928177 Query 104537 AGTGTTTTTACAAATATCTGCATTTTG 104563 | || || || || || ||||| ||| Sbjct 928176 AAGGTCTTAACGAAAATTTGCATCTTG 928150 >seq7 Length=997883 Score = 140 bits (154), Expect = 7e-28 Identities = 169/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || ||||| | || | || | |||||| |||||||| || || || || ||||| Sbjct 388522 ATACCACCTCTCAATCTCAACACCAAATGTAAAGTAGATTCCTTTTGGATGTTGTAGTCG 388581 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 || | |||||| || ||||| | ||| || |||||||| || | || ||||||||||| Sbjct 388582 GACAAAGTTCTGCCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGATCAGGT 388641 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || ||||| || || || |||||||| | || ||||| || | ||||| | ||| Sbjct 388642 GGGATTCCCTCCTTGTCTTGAATCTTGGACTTGACATTGTCAATTGTATCTGATGATTCA 388701 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || |||| ||||| |||||||| || | |||||| || || || ||||| Sbjct 388702 ACTTCTAAAGTAATGGTCTTACCGGTCAATGTTTTGACGAAAATTTGCAT 388751 Score = 131 bits (144), Expect = 4e-25 Identities = 147/197 (75%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 |||||||| || || || || ||||| || | |||||| || ||||| | ||| || ||| Sbjct 388327 GTAGATTCCTTTTGGATGTTGTAGTCGGACAAAGTTCTGCCATCTTCCAATTGCTTACCA 388386 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 ||||| || | || ||||||||||| || |||||||| ||||| |||||||| | || Sbjct 388387 GCAAAGATCAATCTTTGTTGATCAGGTGGGATTCCTTCCTTATCTTGAATCTTGGACTTG 388446 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 ||||| || | || ||| | || || |||| ||||| |||||||| || | || Sbjct 388447 ACATTGTCGATAGTGTCGGAGGACTCAACTTCTAAGGTAATGGTCTTACCGGTCAAAGTC 388506 Query 104543 TTTACAAATATCTGCAT 104559 || ||||| || ||||| Sbjct 388507 TTAACAAAGATTTGCAT 388523 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151398252477080