Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Millerozyma_20acaciae_20[genbank_20GCA_5F001600675.1_202016-03-01] 10 sequences; 11,065,882 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq2 149 6e-31 seq7 143 2e-29 >seq2 Length=1761743 Score = 149 bits (164), Expect = 6e-31 Identities = 169/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 || |||||||||| ||||||||||||||| |||||||||||||| | ||| || || | Sbjct 928380 CCACCTCTCAATCTCAACACCAAGTGCAAGGTAGATTCCTTTTGGATGTTGTAGTCAGAC 928321 Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900 | || || |||||||| || || || ||||||| |||||||| || ||||||||| Sbjct 928320 AAGGTTCTGCCATCCTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCTGGAGGA 928261 Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960 || ||||| ||||| | ||| || | |||||| | | | |||||||| ||||| Sbjct 928260 ATTCCTTCCTTGTCTTGAATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCGACT 928201 Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || | ||||| || || ||||| | || || || || || ||||| Sbjct 928200 TCTAAAGTGATAGTCTTACCAGTTAAGGTCTTAACGAAAATTTGCAT 928154 >seq7 Length=997883 Score = 143 bits (158), Expect = 2e-29 Identities = 175/239 (73%), Gaps = 0/239 (0%) Strand=Plus/Plus Query 94769 AAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACG 94828 ||| ||| || || |||||||||| || |||||||| ||||||||||||||||| | | Sbjct 388741 AAAATTTGCATACCACCTCTCAATCTTAAAACCAAGTGTAAAGTAGATTCCTTTTGAATG 388800 Query 94829 TTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGC 94888 || || ||| || ||| || ||| |||| || || || ||||||| |||||||| Sbjct 388801 TTGTAGTCGGACAAAGTTCTGCCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGT 388860 Query 94889 TGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCA 94948 || ||||||||||| || || ||||| | ||| || | ||||||| ||| ||||| Sbjct 388861 TGGTCTGGAGGAATTCCCTCCTTGTCTTGAATCTTAGACTTGACGTTATCGATGGTGTCG 388920 Query 94949 GCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 | ||||| || | |||||||| || || || | ||||| || || || ||||| Sbjct 388921 GAAGACTCGACTTCCAAGGTGATGGTCTTACCGGTCAATGTTTTAACGAAAATTTGCAT 388979 Score = 118 bits (130), Expect = 1e-21 Identities = 122/160 (76%), Gaps = 0/160 (0%) Strand=Plus/Plus Query 94773 TTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTAT 94832 ||| || || |||||||||| ||||||||| || ||||||||||||||||| | ||| | Sbjct 388517 TTTGCATACCACCTCTCAATCTCAACACCAAATGTAAAGTAGATTCCTTTTGGATGTTGT 388576 Query 94833 AATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGAT 94892 | ||| || ||| || ||| |||| || || || ||||||| |||||||| |||| Sbjct 388577 AGTCGGACAAAGTTCTGCCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGAT 388636 Query 94893 CTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGAC 94932 | || || || || || ||||| | ||| || | |||||| Sbjct 388637 CAGGTGGGATTCCCTCCTTGTCTTGAATCTTGGACTTGAC 388676 Score = 107 bits (118), Expect = 2e-18 Identities = 142/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 94811 GTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCG 94870 |||||||||||||| | ||| || ||| || ||| || ||| |||| || || || Sbjct 388327 GTAGATTCCTTTTGGATGTTGTAGTCGGACAAAGTTCTGCCATCTTCCAATTGCTTACCA 388386 Query 94871 CCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTG 94930 ||||||| |||||||| ||||| || || || ||||| || || | ||| || | |||| Sbjct 388387 GCAAAGATCAATCTTTGTTGATCAGGTGGGATTCCTTCCTTATCTTGAATCTTGGACTTG 388446 Query 94931 ACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTT 94990 || | ||| |||||| | | || || || | || ||||| || || || | ||| Sbjct 388447 ACATTGTCGATAGTGTCGGAGGACTCAACTTCTAAGGTAATGGTCTTACCGGTCAAAGTC 388506 Query 94991 TTCACAAAGATCTGCAT 95007 || |||||||| ||||| Sbjct 388507 TTAACAAAGATTTGCAT 388523 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448291143963600