Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Millerozyma_20acaciae_20[genbank_20GCA_5F001600675.1_202016-03-01] 10 sequences; 11,065,882 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq2 183 6e-41 >seq2 Length=1761743 Score = 183 bits (202), Expect = 6e-41 Identities = 576/878 (66%), Gaps = 36/878 (4%) Strand=Plus/Minus Query 42285 ATCGAGCACCAGGACATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCC 42344 ||| || |||| || || ||| |||||||||||||| || || |||||| || Sbjct 1445009 ATCAAGTACCACGAGATTTGGCAAATGTACAAGAAGGCCGAGGCGTCTTTCTGGACTGCG 1444950 Query 42345 GAGGAGATTGACCTGGCCAAGGACACGGCCGGCTGG---GAGTCACTGTCTGAGAACGAA 42401 ||||||||||| ||| ||| || | || |||| ||| | || || ||||| Sbjct 1444949 GAGGAGATTGATTTGGGCAAAGATATCCACGACTGGAAGGAGAGATTGAACGACAACGAG 1444890 Query 42402 AAGTTTTTCCTCAAAAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAG 42461 |||| ||| | || || |||| ||||| || || || || || || ||||| ||| Sbjct 1444889 AAGTACTTCATTTCAAGAATCTTGGCTTTCTTTGCTGCATCGGATGGTATTGTCAACGAG 1444830 Query 42462 AACCTGGCC-ACCAGGTTCATGAAAGAGGTGCAGTACTTTGAGGCGCGC--TGCTTCTAC 42518 ||| ||| | | || || |||||||| | || || || || |||||| Sbjct 1444829 AACTTGGTTGAAAATTTTTCTGCT-GAGGTGCA--AATTCCAGAAGCCAAGTGTTTCTAC 1444773 Query 42519 GGCTTCCAGATAGCCATAGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCAACACG 42578 || ||||| || || |||||| | ||||||||| ||| | || || |||| Sbjct 1444772 GGGTTCCAAATCATGATGGAGAACATCCACTCTGAGACCTACTCTTTGCTTATCGACACC 1444713 Query 42579 TACATCCTGGATCCCGTCGAGCGTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGC 42638 |||||| ||| ||| || || ||||||| ||||| |||| || || || Sbjct 1444712 TACATCAAGGACCCCCAAGAAGCAGACTTTTTGTTCAACGCCATCGAGAACATTCCATGT 1444653 Query 42639 ATCAAGAAGAAGGCGGACTGGGCGCTCAACTGGATCGAGAGTCCCGACGCAAC------G 42692 |||||||||||||| |||||||| | | |||||| | ||||| || | Sbjct 1444652 ATCAAGAAGAAGGCTGACTGGGCTTTGAGGTGGATCAA------CGACGGAAGTGCCTTG 1444599 Query 42693 TTCGGCGAGAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTC 42752 || || ||||| | || || || ||||||||||||| ||||| ||| || | ||| Sbjct 1444598 TTTGGTGAGAGATTAGTTGCGTTCGCCGCCGTCGAGGGTATCTTTTTCAGTGGATCATTC 1444539 Query 42753 GCCTCCATCTTCTGGCTCAAGCAGA-AGGTGTCGATGCCCGGACTCACCTTCTCGAACGA 42811 || || ||||||||| | ||| | | |||| | |||||| || | || ||||| ||||| Sbjct 1444538 GCTTCTATCTTCTGGTTAAAGAAAAGAGGT-TTGATGCCAGGTTTGACTTTCTCCAACGA 1444480 Query 42812 ACTCATCAGCAGGGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCA 42871 | || | || || || || | || | |||||||| ||| | ||||||| || Sbjct 1444479 GTTGATTTGTAGAGATGAAGGTTTACACACCGACTTTGCATGCTTGTTGTTCTC---TCA 1444423 Query 42872 CCTCAGGCACA--AGCCCTCGA--AGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGG 42927 | | ||| | || || || | ||| ||| || ||||| || || || Sbjct 1444422 CTT---GCAAAATAGACC-AGATCAAGAGATTGTCGAAAAAATTATCACCGAAGCAGTCA 1444367 Query 42928 AGATCGAGAAGGAGTTCCTCACGCAGTCGCTGCCCGTGTCCCTGGTCGGCATGAACCACG 42987 |||||||| |||||| | | | |||||||||| | | || |||||| | Sbjct 1444366 CAATCGAGAAAGAGTTCTTTGTCGATGCCTTGCCCGTGTCATTATTGGGTATGAACGCCA 1444307 Query 42988 ACCTCATGTGCAAGTACATCCAGTACGTCGCCGAC-CATCTCCTGTGCCAGATGGGTCTC 43046 | | ||||| |||| || ||| ||| |||||| || | ||| | ||||| | Sbjct 1444306 AGTTGATGTGTCAGTATGTCGAGTTCGTTGCCGACAGATTACTTGTTGC-TTTGGGTAAC 1444248 Query 43047 AGCCGCCTCTACAACACGCCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGC 43106 | | | |||||| | || ||||| || ||||| ||||| ||||||| ||| Sbjct 1444247 AACAAGGTTTACAACGTCACAAATCCATTCGATTTCATGGAAAACATATCGTTGGCGGGA 1444188 Query 43107 AAGACCAACTTTTTCGAGAAGCGCGTCGCCGACTACCA 43144 ||||| |||||||||||||| | ||| |||||||| Sbjct 1444187 AAGACTAACTTTTTCGAGAAAAGAGTCAGTGACTACCA 1444150 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944339081957600