Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Millerozyma_20acaciae_20[genbank_20GCA_5F001600675.1_202016-03-01] 10 sequences; 11,065,882 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq7 113 4e-20 seq2 109 5e-19 >seq7 Length=997883 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| | |||| || ||||| |||| ||||| || |||||||| ||||| ||| | Sbjct 388753 CCACCTCTCAATCTTAAAACCAAGTGTAAAGTAGATTCCTTTTGAATGTTGTAGTCGGAC 388812 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || | ||| || | || || ||||| ||||||||| || || || ||||| Sbjct 388813 AAAGTTCTGCCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCTGGAGGA 388872 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 || ||||||||||| || || ||||| | |||| |||||| | | ||||||| Sbjct 388873 ATTCCCTCCTTGTCTTGAATCTTAGACTTGACGTTATCGATGGTGTCGGAAGACTCGACT 388932 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || | ||| | || || ||||||| ||||| || ||||| ||||| Sbjct 388933 TCCAAGGTGATGGTCTTACCGGTCAATGTTTTAACGAAAATTTGCAT 388979 Score = 89.7 bits (98), Expect = 5e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| | |||| |||||||||||||| ||||| || ||||| || ||||| ||| | Sbjct 388525 CCACCTCTCAATCTCAACACCAAATGTAAAGTAGATTCCTTTTGGATGTTGTAGTCGGAC 388584 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || | ||| || | || || ||||| ||||||||| || ||||| || || Sbjct 388585 AAAGTTCTGCCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGATCAGGTGGG 388644 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 || ||||||||||| || || ||||| | || | || || | || ||| Sbjct 388645 ATTCCCTCCTTGTCTTGAATCTTGGACTTGACATTGTCAATTGTATCTGATGATTCAACT 388704 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || | || | || || ||||||| ||||| || ||||| ||||| Sbjct 388705 TCTAAAGTAATGGTCTTACCGGTCAATGTTTTGACGAAAATTTGCAT 388751 >seq2 Length=1761743 Score = 109 bits (120), Expect = 5e-19 Identities = 154/213 (72%), Gaps = 4/213 (2%) Strand=Plus/Minus Query 47353 CCGAAGCCGTCGCCATTGAGATGGAGTTTTTCGCCGAGGCTCTGCCCGAATCTTTAGTGG 47412 ||||||| ||| | || |||| ||||| || | ||| || |||||| || ||| ||| Sbjct 1444378 CCGAAGCAGTCACAATCGAGAAAGAGTTCTTTGTCGATGCCTTGCCCGTGTCATTATTGG 1444319 Query 47413 GAATGAACGCGGAGATGATGAGAAAGTACATCGAATTTGTCGCCGACCGCCTGCTCGTTC 47472 | |||||||| || ||||| | |||| |||| || || |||||| | | || ||| Sbjct 1444318 GTATGAACGCCAAGTTGATGTGTCAGTATGTCGAGTTCGTTGCCGACAGATTACTTGTT- 1444260 Query 47473 AGCTAAAG-TATCC-CAAGATTTACCACACCGAGAATCCATTCGAGTTTATGAACAACAT 47530 ||| | || | |||| ||||| || | ||||||||||| || ||| | ||||| Sbjct 1444259 -GCTTTGGGTAACAACAAGGTTTACAACGTCACAAATCCATTCGATTTCATGGAAAACAT 1444201 Query 47531 TTCGCTCGAGGGCAAGACCAACTTTTTCGAGAA 47563 ||| | | ||| ||||| |||||||||||||| Sbjct 1444200 ATCGTTGGCGGGAAAGACTAACTTTTTCGAGAA 1444168 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475500740562400