Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Millerozyma_20acaciae_20[genbank_20GCA_5F001600675.1_202016-03-01] 10 sequences; 11,065,882 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq2 134 2e-26 >seq2 Length=1761743 Score = 134 bits (148), Expect = 2e-26 Identities = 516/802 (64%), Gaps = 19/802 (2%) Strand=Plus/Plus Query 159650 TTCTCGAAAAAGTTGGTCTTGCCCTCCATGGATATTGATTCCATGAACCCGAATGGGTTC 159709 |||||||||||||| ||||| ||| ||| ||||| ||||||||| ||||||| || Sbjct 1444168 TTCTCGAAAAAGTTAGTCTTTCCCGCCAACGATATGTTTTCCATGAAATCGAATGGATTT 1444227 Query 159710 TTCACGTGATAGCGCTTCGGAAATCCGAGAGCCGCCAGCAACCTGTCTGCCACAAATTCG 159769 | |||| || ||| || | ||| | || || ||||| || || || ||| Sbjct 1444228 GTGACGTTGTAAACCTTGTTGTTACCCAAAGCAACAAGTAATCTGTCGGCAACGAACTCG 1444287 Query 159770 ATGTAGCTACACATCTGCTCACAGTTGATCCCCAGCAGCCTAACGGGGAGCGCTTCCGAC 159829 | || ||||||| || ||| || |||| | ||||| | || || ||| Sbjct 1444288 ACATACTGACACATCAACTTGGCGTTCATACCCAATAATGACACGGGCAAGGCATC-GAC 1444346 Query 159830 AGA-AACTCCTTCTCAATCTCGACCGCTTCGGTCACAATCTGCGAGACACGTTCGTACCC 159888 | | ||||| ||||| || ||| |||||||| | ||| | |||| || | | Sbjct 1444347 AAAGAACTCTTTCTCGATTGTGACTGCTTCGGTGATAATTTTTTCGACAATCTCTTGATC 1444406 Query 159889 CGGC-----TTGCCCAAAATGTGGTCCTTAAACAGGAGGCACGCAAAGTCGCAGTGCAGT 159943 || |||| || || | |||| | ||| ||||||||| ||| | Sbjct 1444407 TGGTCTATTTTGC---AAGTGAGAG-----AACAACAAGCATGCAAAGTCGGTGTGTAAA 1444458 Query 159944 CCCTCGTCCCGAGAGATGAACTCGTTGGACATGATGAGGCCCGGCATGATCCCACGCGGT 160003 || || || | | | || ||||||||||| | | | || ||||| | || | Sbjct 1444459 CCTTCATCTCTACAAATCAACTCGTTGGAGAAAGTCAAACCTGGCATCAAACCTCTTTTC 1444518 Query 160004 TTGAGCCAAAAAATGGCCGCAAAAGCACCGCTAAAAAAGATCCCCTCCACGGCCGCAAAC 160063 || | ||| || || | || || | || || |||||||| ||||| ||||| || ||| Sbjct 1444519 TTTAACCAGAAGATAGAAGCGAATGATCCACTGAAAAAGATACCCTCGACGGCGGCGAAC 1444578 Query 160064 GCCACGAGCCTCTCACCAAAAGAGGCGTTGGTGTCATGGGTCCACCTTTTGGCCCATTCA 160123 || || | ||||||||||| |||| | ||| | | ||||||| ||||| ||| Sbjct 1444579 GCAACTAATCTCTCACCAAACAAGGCACTTCCGTCGTTGATCCACCTCAAAGCCCAGTCA 1444638 Query 160124 GCCTTCTTTGCGATGCACGGCATGCGCTCGACGGCGTTAAACAATCTGTCCTGCTCCTT- 160182 |||||||| ||| || || ||| ||||| |||||| ||||| || ||||| ||| Sbjct 1444639 GCCTTCTTCTTGATACATGGAATGTTCTCGATGGCGTTGAACAAAAAGT-CTGCTTCTTG 1444697 Query 160183 CACATCCTTGATCAGAGTAGCAATCAGCTTCGAGTACATTTCTGCGTGCACATTTTCGAT 160242 |||||||| || | || ||| ||||| | || | ||| | || || || Sbjct 1444698 GGGGTCCTTGATGTAGGTGTCGATAAGCAAAGAGTAGGTCTCAGAGTGGATGTTCTCCAT 1444757 Query 160243 GGCCATCTGAAAGTTGTAGAAATATGTCGCCTCCAGATACTGCACCTCCTGTGTGAACCT 160302 || || || ||||||| | | || || || |||||||| | || | Sbjct 1444758 CATGATTTGGAACCCGTAGAAACACTTGGCTTCTGGAATTTGCACCTCAGCAGAAAAATT 1444817 Query 160303 TTGACCCAGATTGGCATTAACCAACCCGTCGGCGGCCGCAAAGAAAGCCAACACGTGAGA 160362 || | ||| || | || || | || || | || |||||||||||||| | || Sbjct 1444818 TTCAACCAAGTTCTCGTTGACAATACCATCCGATGCAGCAAAGAAAGCCAAGATTCTTGA 1444877 Query 160363 GATGAAATGTCTCTCGTCTTTGTTGAGTCTCTTTTCCCAGT-GTGTCACGTCTTGGGCCA 160421 ||||| | |||||| | ||| | ||||| | ||||| ||| | |||| | ||| Sbjct 1444878 AATGAAGTACTTCTCGTTGTCGTTCAATCTCTCCTTCCAGTCGTG-GATATCTTTGCCCA 1444936 Query 160422 AATCAACCTCTTCCGCGCTCCA 160443 |||||| ||| ||||| |||| Sbjct 1444937 AATCAATCTCCTCCGCAGTCCA 1444958 Score = 93.3 bits (102), Expect = 7e-14 Identities = 128/179 (72%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 203882 CTCAGATAGTACATGCCGGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGAC 203941 |||| || ||||| |||||||| | || |||| ||| ||||| | ||||||||||| | Sbjct 1326933 CTCAAGTAATACATACCGGTCTTCAAACCTTTCTTCCAACCGTAGAAGTGCATGGAAGTC 1326992 Query 203942 AGTTTGCTCACGTTGGGGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAA 204001 | || | || ||||||| |||||||| |||| || || || ||||||||| Sbjct 1326993 AACTTACCCATTGTGGGGTCTTTGATGTGAATATTCAAGGATTGAGACTGATCGATGAAA 1327052 Query 204002 GGCGCCCGATCTGCGGCCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTT 204060 | || | || || ||||||| || || ||| || ||||||||||| || || || Sbjct 1327053 GCAGCTCTGTCAGCAGCCATATCAATGATATGCTTTTGAGAAATCTCCCAAACAGTTTT 1327111 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795155100605600