Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Millerozyma_20acaciae_20[genbank_20GCA_5F001600675.1_202016-03-01] 10 sequences; 11,065,882 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq2 212 7e-50 >seq2 Length=1761743 Score = 212 bits (234), Expect = 7e-50 Identities = 607/928 (65%), Gaps = 10/928 (1%) Strand=Plus/Plus Query 47880 GCTATAGATGCTAGATTACATACAGCTACCTCATTTGGATTAGTATATTGTATTATTTCA 47939 || ||||| || | || || ||||| ||||||| ||| | |||| | || ||| Sbjct 1327812 GCGATAGAGGCCAAGTTGCACACAGCGACCTCATCTGGGGAGGAGTATTCAACAATCTCA 1327871 Query 47940 GCACATAGATTACCACATTTGATAGTACCCAAATTTTGATGATTATTNNNNTTGTTACAT 47999 ||| | || | |||||| |||||||||| | || || | |||||||| Sbjct 1327872 CAACACAAGTTGGATGACTTGATAATACCCAAATTCTTTTGGTTGGTTTTCTTGTTACAA 1327931 Query 48000 GCGTCCTTGTAAAGCATAAAAGGTGTTCCAGTTTCTATCTGAGATTCAATGATAGATTTC 48059 || || || || | ||| || || || ||||| || |||| | || | || || | | Sbjct 1327932 GCATCTTTATACAACATGAATGGAGTACCAGTCTCGGTCTGTGCCTCTAAAATCGAGTAC 1327991 Query 48060 CAAACAGTCCTAGCCTTTATAACAGCTCTA--GCTTTATTATCATGTTCGTATTTAGTAT 48117 || | || ||||| | ||||| | | || | || || || ||| |||| | Sbjct 1327992 CACAATTTCTGGGCCTTGACAACAGAGCGACCGCGTCCTTCTCTC--TCATATCTAGTGT 1328049 Query 48118 ATAACTTCTCAAATTCATCCCCATACACATTATCTAACCCAGGACATTCATTAGGACACA 48177 | || | |||||| ||||| || || |||| | || || | |||||| ||| | | Sbjct 1328050 ACAATTCCTCAAACTCATCTCCGTAGACATCAGACAAACCTGTTGCTTCATTTGGAGAGA 1328109 Query 48178 TCAATGACCAATCCTCATCATTTTTTACTCTAGTCATAAATATATCTGGTATCCAAAGAG 48237 || | ||| || ||| | | ||||| |||| || | |||||| ||||| | | Sbjct 1328110 ATAAAGTCCAGTCACCATTTTGCTCAACTCTTTTCATGAAAAGATCTGGAATCCACAATG 1328169 Query 48238 CTATAAATAAATCCCTAGTTCTTAGTTCTTCATTGCCACTATTCCTTTTAAGTTCAAGAA 48297 || || || || || | ||| | |||||| || || |||| | | | || | || Sbjct 1328170 CTGGGAACAAGTCTCTGGCTCTGATTTCTTCTTTACCGTGATTCTTCCTGATATCGATAA 1328229 Query 48298 AGTCCATTATATCAGCATGCCATGGTTCTAAATATATTGCCATTACACCTGGTCGTTTAT 48357 |||| | ||||||| |||||||| || ||||| | || | ||||||||| |||| Sbjct 1328230 AGTCGAAAATATCAGAGTGCCATGGCTCCAAATAAAGAGCAAAAGCACCTGGTCTCTTAT 1328289 Query 48358 TACCTCCTTGATCTATATATCTGGCAGTATTGTTATAAACTCTTAACATTGGGACAATAC 48417 |||| || || || | || || ||||||||||| | ||||||| ||| || | ||||| Sbjct 1328290 TACCACCCTGGTCAACGTACCTAGCAGTATTGTTGAACACTCTTACCATAGGAATAATAC 1328349 Query 48418 CATTTGATATACCATTGGTTCCCGAAATATAACTTCCACTAGCTCTTATATTACTAAT-T 48476 |||| || |||| ||||| || | ||| ||| |||| | | | ||||| ||| | Sbjct 1328350 CATTGGAAGTACCGTTGGTACCAGCAATGTAAGCTCCAGTGGAACGAATATTGTGAATAT 1328409 Query 48477 GAAATACCTATACCACCTGCCATTTTAGATATTAGAGCACACCGTTTAAGGGTATCATAA 48536 | || ||| |||||||| || | || || || | ||||| || | || |||||| Sbjct 1328410 GCAA-ACCAATACCACCAGCGCTCTTGGAGATCAAGGCACAAGTCTTCAAAGTGTCATAA 1328468 Query 48537 ATTCCTTCTATACTATCATCTATCATATTTAATAGAAAACAACTAGACATTTGCGGATGA 48596 || ||||| ||| || ||| ||||| | | || || ||||| || || | Sbjct 1328469 ATACCTTCAATAGAGTCGTCTTTCATAGCAACCAAGAAGCACGAGGACATCTGAGGGCTA 1328528 Query 48597 CAAGTTCCTGAATTAAATAATGTTGGAGATGCATGAATAAACCATTTCTCTGATAACAAT 48656 ||| || | || || ||||| ||||| |||| |||| || | | || | ||| Sbjct 1328529 GGAGTACCGGCGTTGAACAATGTAGGAGAGCCATGGGTAAAATATCTTTGCGACATCAAA 1328588 Query 48657 TTATATGTTTCAATAACAGAATCTATATCCCATTG--ATGTATACCTATAGATACACGCA 48714 || |||| |||||| ||| | |||| | ||| || ||||| | || || | || Sbjct 1328589 TTGTATGATTCAATCACACGAGGGATAT--CGTTGCCGTGAATACCGACAGCAACTCTCA 1328646 Query 48715 TTAACATATATTGAGGTCTTTCAACAATTTTGTTATTTATTTTCAAAAGATATGATTTTT 48774 | | || | || || ||||| | | || || ||| | | | ||| || ||| Sbjct 1328647 TAATCAAGTGCTGGGGCCTTTCTGCGACCTTACCGTTGATTCTGAGCAAATAGGACCTTT 1328706 Query 48775 CCAATGTTTTAAAACCAAAATAGTTGTA 48802 ||||||| ||||| ||||| |||||||| Sbjct 1328707 CCAATGTCTTAAACCCAAAGTAGTTGTA 1328734 Score = 199 bits (220), Expect = 4e-46 Identities = 581/884 (66%), Gaps = 13/884 (1%) Strand=Plus/Plus Query 18669 TTTTTGATATTCGGCAACTCTTTTTTCAAAGAAATTAGTTTTTCCCTCTAATGATATACA 18728 |||||| || || |||||||| || || || ||||| |||||| | || ||||| Sbjct 1444146 TTTTTGGTAGTCACTGACTCTTTTCTCGAAAAAGTTAGTCTTTCCCGCCAACGATATGTT 1444205 Query 18729 TTCCATAAAATCAAATGGATTTTTTACATTATATAtttttttGAATCCTAATTCTAATAG 18788 |||||| ||||| ||||||||| | || || || | || ||| || || | | || Sbjct 1444206 TTCCATGAAATCGAATGGATTTGTGACGTTGTAAACCTTGTTGTTACCCAAAGCAACAAG 1444265 Query 18789 TAGTCTATCCGCTACAAATTTAATATATGTGTTCATCATATCACAATTCATTCCTATTAA 18848 || ||| || || || || | | ||| ||||| | ||||| || | ||| Sbjct 1444266 TAATCTGTCGGCAACGAACTCGACATACTGACACATCAACTTGGCGTTCATACCCAATAA 1444325 Query 18849 TTTAACAGGTAGTGCATCTGTAAGAAATTCTTGTTCTATATTTACTGCCTCTGATATAAT 18908 | || || | ||||| || || |||| || || | ||||| || | ||||| Sbjct 1444326 TGACACGGGCAAGGCATCGACAAAGAACTCTTTCTCGATTGTGACTGCTTCGGTGATAAT 1444385 Query 18909 AGATACAACTCTATCTTCATTAGGAGGGTATAGAAGATGTTTAAACATCAAACATGCAAA 18968 | | || | |||| || || | | | | || |||| ||| |||||||| Sbjct 1444386 TTTTTCGACAATCTCTTGATCTGGTCTATTTTGCAAGTGAGAGAACAACAAGCATGCAAA 1444445 Query 18969 ATCACAATGTAGTCCCTCGTCTCTACTTATCAATTCATTAGAAAATGTTAAACCAGGCAT 19028 || |||| || || ||||||| ||||| || || || || || ||||| ||||| Sbjct 1444446 GTCGGTGTGTAAACCTTCATCTCTACAAATCAACTCGTTGGAGAAAGTCAAACCTGGCAT 1444505 Query 19029 CAGTCCTCttttttttAACCAGAATATAGAAGCAAATGATCCAGAAAAGAATATACCTTC 19088 || |||||||| ||||||||||| |||||||| ||||||||| || || ||||| || Sbjct 1444506 CAAACCTCTTTTCTTTAACCAGAAGATAGAAGCGAATGATCCACTGAAAAAGATACCCTC 1444565 Query 19089 TACTGCTGCAAAAGCAACTAGTCTTTCTCCATAACTAG---CATCATTATTATGAATCCA 19145 || || || || ||||||| ||| || ||| ||| || | || | | ||| |||| Sbjct 1444566 GACGGCGGCGAACGCAACTAATCTCTCACCA-AACAAGGCACTTCCGTCGT-TGA-TCCA 1444622 Query 19146 TTTCAGTGCCCAATCAGCCTTCTTTTTTACACATGGCATTGTCTCTATAGAATTAAATAG 19205 ||| ||||| ||||||||||| || | |||||| || |||| || | || || | Sbjct 1444623 CCTCAAAGCCCAGTCAGCCTTCTTCTTGATACATGGAATGTTCTCGATGGCGTTGAACA- 1444681 Query 19206 ATACATACGC-TCATCTGTATCTTTAACATATGCATCTATCAATAAACTGTACATTTCTG 19264 | | | || || | | || || | || | || || | ||| ||| | || | Sbjct 1444682 AAAAGTCTGCTTCTTGGGGGTCCTTGATGTAGGTGTCGATAAGCAAAGAGTAGGTCTCAG 1444741 Query 19265 AATGAATATTTTCTATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCTGTTATCTGTA 19324 | || || || || || || || || ||||| ||||| | ||||||| || || | Sbjct 1444742 AGTGGATGTTCTCCATCATGATTTGGAACCCGTAGAAACACTTGGCTTCTGGAATTTGCA 1444801 Query 19325 CTTCACTACAAAATCTTTCGACCAAATTTTCATTAACTATTCCATCACTAGCTGCAAAAA 19384 | ||| | |||| |||| ||||| || || || || || ||||| || ||||| | Sbjct 1444802 CCTCAGCAGAAAAATTTTCAACCAAGTTCTCGTTGACAATACCATCCGATGCAGCAAAGA 1444861 Query 19385 ATGCTAATACATGTTTAATAAAATGTTTTTCATCTGAGGTT-AATGT---ATTCCAATCA 19440 | || || | | ||| || | || || | || ||| ||| | ||||| || Sbjct 1444862 AAGCCAAGATTCTTGAAATGAAGTACTTCTCGT-TGTCGTTCAATCTCTCCTTCCAGTCG 1444920 Query 19441 TTAATATCTTTAGATAAATCTACTTCTTCAACTGTCCAAAAAGAAGCCTCTGCTTTTTTA 19500 | |||||||| ||||| | || || | ||||| ||||| ||||| || || || Sbjct 1444921 TGGATATCTTTGCCCAAATCAATCTCCTCCGCAGTCCAGAAAGACGCCTCGGCCTTCTTG 1444980 Query 19501 TACATGTTCCATATATCACGATATTGTATAGGAAATATAACAAA 19544 ||||| | ||| || || | || | ||||| || | ||||| Sbjct 1444981 TACATTTGCCAAATCTCGTGGTACTTGATAGGGAACAACACAAA 1445024 Score = 161 bits (178), Expect = 1e-34 Identities = 406/611 (66%), Gaps = 12/611 (2%) Strand=Plus/Plus Query 48180 AATGACCAATCCTCATCATTTTTTACTCTAGTCATAAATATATCTGGTATCCAAAGAGCT 48239 || |||||||| | | | | |||||| ||| |||| ||| || | ||||||| | Sbjct 647515 AACGACCAATCTTTGTTCTCGTGTACTCTTTCCATGAATAAATCAGGAACCCAAAGACCA 647574 Query 48240 ATAAATAAATCCCTAGTTCTTAGTTCTTCATTGCCACTATTCCTTTTAAGTTCAAGAAAG 48299 ||||||||| || | |||| ||||||||| || ||| |||| | || |||||| Sbjct 647575 TAAAATAAATCTCTTGCTCTTCTTTCTTCATTACCGTGATTTTTTTTTAACTCTAGAAAG 647634 Query 48300 TCCATTATATCAGCATGCCATGGTTCTAAATATATTGCCATTACACCTGGTCGTTTATTA 48359 || | ||||||| ||||||||| || | || || || | ||||||||| ||||||| Sbjct 647635 TCAAATATATCACTATGCCATGGCTCAAGGTAAATAGCAAAAGCACCTGGTCTTTTATTA 647694 Query 48360 CCTCCTTGATCTATATATCTGGCAGTATTGTTATAAACTCTTAACATTGGGACAATACCA 48419 || || || || | |||||| ||||||||||| |||| | | ||| || |||| ||| Sbjct 647695 CCACCCTGGTCAACATATCTCGCAGTATTGTTGAAAACCCGGAGCATGGGAACAAGACCG 647754 Query 48420 TTTGATATACCATTGGTTCCCGAAATATAACTTCCACTAGCTCTTATATTA-CTAATTGA 48478 |||| | ||| | | | || || ||||||| ||||||||||| || || Sbjct 647755 CTTGACACTCCACTAGAGCTGGATATGAAACTTCCTTCGCCTCTTATATTATGTACGTGC 647814 Query 48479 AATACCTATACCACCTGCCATTTTAGATATTAGAGCACACCGTTTAAGGGTATCATAAAT 48538 || |||||| ||||| | ||| || |||| ||| | | || || | || || Sbjct 647815 AA-ACCTATGCCACCGGAAGCTTTTGAAATTAAAGCTGTCTTATGTAGTGTCTTGTATAT 647873 Query 48539 TCCTTCTATACTATCATCTATCATATTTAA-TAGAAAACAACTAGAC----ATTTGCGGA 48593 || ||||| || ||| || | || |||||| ||| ||| | ||| Sbjct 647874 CCCATCTATCGAGTCGTCT-TCTGTTGCAACTAGAAAGCAAGAGGACAAAAAATTG---- 647928 Query 48594 TGACAAGTTCCTGAATTAAATAATGTTGGAGATGCATGAATAAACCATTTCTCTGATAAC 48653 | | || || | ||| || | ||| || ||||||||||| || |||||| || | Sbjct 647929 TAATTTGTGCCAGCATTGAAAAGTGTGGGTGATGCATGAATGAAATATTTCTTAGACATT 647988 Query 48654 AATTTATATGTTTCAATAACAGAATCTATATCCCATTGATGTATACCTATAGATACACGC 48713 | || || ||||||| || || ||||| | ||||| |||| || || | | Sbjct 647989 AGTTCGTAGGTTTCAACAATGCCGTCCATATCTCTCCCGTGTATCCCTAAAGCCACCCTC 648048 Query 48714 ATTAACATATATTGAGGTCTTTCAACAATTTTGTTATTTATTTTCAAAAGATATGATTTT 48773 | ||||| |||| || |||| | | || || || || || |||||||| || ||| Sbjct 648049 AAGAACATGAATTGGGGAGTTTCCATACATTCATTCTTAATCTTTAAAAGATAAGACTTT 648108 Query 48774 TCCAATGTTTT 48784 | ||| || || Sbjct 648109 TGCAACGTCTT 648119 Score = 113 bits (124), Expect = 5e-20 Identities = 279/417 (67%), Gaps = 11/417 (3%) Strand=Plus/Plus Query 47019 AAATAATACATACCAGTCTTTAAACCTAAACTCCATCCATAGAAATGCATACTAGTTAAT 47078 || ||||||||||| ||||| |||||| |||| || ||||| ||||| ||| || Sbjct 1326936 AAGTAATACATACCGGTCTTCAAACCTTTCTTCCAACCGTAGAAGTGCATGGAAGTCAAC 1326995 Query 47079 TTAGAATAACTAGGTTCTGAAATATGAATATTAAGAGATTGACTCTGATCAATAAATGCA 47138 ||| | || ||| || |||||||| | |||||| |||||| || || ||| Sbjct 1326996 TTACCCATTGTGGGGTCTTTGATGTGAATATTCAAGGATTGAGACTGATCGATGAAAGCA 1327055 Query 47139 CCTCTATCAGCTGCCATATCTAAAATAACCCTTTGTGGTATCTCCCATACTGTTTTATA- 47197 |||| ||||| |||||||| | ||| | |||| | |||||||| || |||||||| Sbjct 1327056 GCTCTGTCAGCAGCCATATCAATGATATGCTTTTGAGAAATCTCCCAAACAGTTTTATAT 1327115 Query 47198 AATTTGTTTAATGTCTTCTGGGA-GATTAGTATT--TTGAATAGATCCTCCgttttctat 47254 || | || || || ||||| | | || ||| | ||||||||| || || | || Sbjct 1327116 AAAGTCTTCAA-CTCATCTGGAATGTTTGGTAATCCTTGAATAGAACCATTATTAGCAAT 1327174 Query 47255 aattttgtttttta---attcatttgaccaaagttttcgttcagttaatgtttttaaAAG 47311 || ||||| || | | ||||| |||||| |||| || || | Sbjct 1327175 GATGTTGTTCTTCATAGAATCATT---CCAAAGACCCAAATCAGCCAAGTCACGCAACAA 1327231 Query 47312 ATGAGGATTAACAATTTGAAATTCTCCAGATAGTACTCTACGGCTATATATATTACTTGT 47371 | ||||| |||||||| ||||| || | | ||||| | | || || || || Sbjct 1327232 GTATGGATTGACAATTTGGAATTCACCGGCCAACACTCTTCTGGAGTAAATGTTTGAGGT 1327291 Query 47372 ATATGGTTCTATAGATTCATTATTTCCAAAAATTTGAGCAGTTGATGCTGTAGGCAT 47428 ||| ||||| | | ||||||| || || || || || | ||| || || |||||||| Sbjct 1327292 ATAAGGTTCGAAACATTCATTGTTACCCAAGATCTGCGAAGTAGACGCAGTAGGCAT 1327348 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 562108729736400