Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Millerozyma_20acaciae_20[genbank_20GCA_5F001600675.1_202016-03-01] 10 sequences; 11,065,882 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq2 212 3e-50 >seq2 Length=1761743 Score = 212 bits (234), Expect = 3e-50 Identities = 247/331 (75%), Gaps = 2/331 (1%) Strand=Plus/Plus Query 25888 ATTTGGACAGAATAAATGCCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTGG 25947 ||||||| |||||||| ||| ||| |||||||||||||| | | ||| || | |||||| Sbjct 1328099 ATTTGGAGAGAATAAAGTCCAGTCACCATTTTGCTCAACTCTTTTCATGAAAAGATCTGG 1328158 Query 25948 AATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTTTTT 26007 |||||||| ||| || || ||||| ||||| ||||||||||| ||||||||||| | Sbjct 1328159 AATCCACAATGCTGGGAACAAGTCTCTGGCTCTGATTTCTTCTTTACCGTGATTCTTCCT 1328218 Query 26008 TAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAACTACC 26067 | ||| | || || |||||||| ||||||||||| || ||||| | ||||||| ||| Sbjct 1328219 GATATCGATAAAGTCGAAAATATCAGAGTGCCATGGCTCCAAATAAAGAGCAAAAGCACC 1328278 Query 26068 TTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCAACAT 26127 | ||| || ||||| || || ||||| || ||||| | ||||| ||| | | ||| Sbjct 1328279 TGGTCTCTTATTACCACCCTGGTCAACGTACCTAGCAGTATTGTTGAACACTCTTACCAT 1328338 Query 26128 TGGAACTAAT-CCAGTTGAAAATCCGTTTGTGCTATGAATCTTGGATCCTGTCGATCTAA 26186 |||| |||| ||| | ||| ||||| || | | ||| | | ||| || || | || Sbjct 1328339 AGGAA-TAATACCATTGGAAGTACCGTTGGTACCAGCAATGTAAGCTCCAGTGGAACGAA 1328397 Query 26187 TATCGTGAGCATGAATACCGATTCCACCAGC 26217 ||| |||| ||| | ||| || |||||||| Sbjct 1328398 TATTGTGAATATGCAAACCAATACCACCAGC 1328428 Score = 145 bits (160), Expect = 4e-30 Identities = 220/310 (71%), Gaps = 10/310 (3%) Strand=Plus/Plus Query 25925 ACTTTCTCCATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTCTCGCTCTCATT 25984 ||| | ||||| |||||||| |||| ||| | |||||||||||||||| ||||| || Sbjct 647539 ACTCTTTCCATGAATAAATCAGGAACCCAAAGACCATAAAATAAATCTCTTGCTCTTCTT 647598 Query 25985 TCTTCTTTTCCGTGATTCTTTTTTAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGT 26044 ||||| || |||||||| ||||||| |||| || ||||| ||||| |||||||| Sbjct 647599 TCTTCATTACCGTGATTTTTTTTTAACTCTAGAAAGTCAAATATATCACTATGCCATGGC 647658 Query 26045 TCTAAATAGATAGCAAAACTACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCA 26104 || | || ||||||||| |||| |||||| ||||| || || || ||||| ||| Sbjct 647659 TCAAGGTAAATAGCAAAAGCACCTGGTCTTTTATTACCACCCTGGTCAACATATCTCGCA 647718 Query 26105 GTTTCATTGAAAACTTTCAACATTGGAACTAATCCAGTTGAAAATCCGTTTGTGC----T 26160 || | |||||||| | ||| ||||| | || |||| | ||| | | || | Sbjct 647719 GTATTGTTGAAAACCCGGAGCATGGGAACAAGACCGCTTGACACTCCACTAGAGCTGGAT 647778 Query 26161 ATGAATCTTGGATCCTGTCG-ATCTAATATCGTGAGCATGAATACCGATTCCACCAGCCC 26219 ||||| || |||| ||| ||| |||| || | || | ||| || ||||| | Sbjct 647779 ATGAAACT----TCCT-TCGCCTCTTATATTATGTACGTGCAAACCTATGCCACCGGAAG 647833 Query 26220 ATTTTGAAAT 26229 ||||||||| Sbjct 647834 CTTTTGAAAT 647843 Score = 93.3 bits (102), Expect = 2e-14 Identities = 119/164 (73%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 25016 AATTCTCCAGACAAAACTCTTCTTATTGATAAGTTTGAAGTGAATGGTTCAAAACATTCA 25075 ||||| || | ||| |||||||| | | |||||| || | ||||| ||||||||| Sbjct 1327251 AATTCACCGGCCAACACTCTTCTGGAGTAAATGTTTGAGGTATAAGGTTCGAAACATTCA 1327310 Query 25076 TTATTTCCTAAGATTTGAGAAGTAGATGCTGTTGGCATTAATGCTATTAATAGCGAATTT 25135 || || || ||||| || |||||||| || || ||||| || | || || || || Sbjct 1327311 TTGTTACCCAAGATCTGCGAAGTAGACGCAGTAGGCATAGGAGCCACCAAAAGAGAGTTC 1327370 Query 25136 CTCAAACCATATTTAACAATCTCTTGTTTTAATTTATCCCAATC 25179 |||||||||| ||| ||| || ||| || || | |||||||| Sbjct 1327371 CTCAAACCATGCTTAGCAAGCTTTTGCTTCAAAGTGTCCCAATC 1327414 Score = 89.7 bits (98), Expect = 3e-13 Identities = 102/136 (75%), Gaps = 1/136 (1%) Strand=Plus/Plus Query 25015 AAATTCTCCAGACAAAACTCTTCTTATTGATAAGTTTGAAGTGAATGGTTCAAAACATTC 25074 ||| || || ||||| || ||||| | | | |||||| ||||| || ||||||||||| Sbjct 646650 AAACTCACCTGACAAGACCCTTCTATTATACACGTTTGACGTGAAAGGCTCAAAACATTC 646709 Query 25075 ATTATTTCCTAAGATTTGAGAAGTAGATGCTGTTGGCATTAATGCTATTAATAGCGAATT 25134 ||| || || || || ||||| |||||||||||||| ||| | ||||| ||||| Sbjct 646710 ATTGAACCCCAATATCTGTGAAGTCGATGCTGTTGGCATGGGTGCAACTAATAAAGAATT 646769 Query 25135 TCTCAAACCAT-ATTT 25149 ||| | |||| |||| Sbjct 646770 TCTAACTCCATGATTT 646785 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 253039969160750